| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357247
Identifier: 119357247
GI number: 119357247
Start: 1642528
End: 1642965
Strand: Reverse
Name: 119357247
Synonym: Cpha266_1439
Alternate gene names: NA
Gene position: 1642965-1642528 (Counterclockwise)
Preceding gene: 119357250
Following gene: 119357246
Centisome position: 52.43
GC content: 53.88
Gene sequence:
>438_bases ATGCGCGACTGGTTGCAGGCAAAAATCTTCATCACCGAAAACGAAATCAATTTCCAGGCCTTCCCTGAGGTTCCCGAGGC AATGGTGATTTTCGGAGCAGGGTATGGTTTTGAGAACATGGCTTCAGTCGAGTGGATGCGTGACAGGAAGATCCATTACT GGGGAGACATCGATACCCACGGTATGGCAATTCTCAACCAGTTACGGAGATTCTTTCCGCAGGCCGCCTCTCTTCTGATG GAGCATGAGACGCTGATGGAGCACCAACCGCTTTGGGGCGCTGAACCATCTCCCGAAACCGGTACGCTCTCGCGCCTGAC CGCTGAAGAGCGTGCGCTTTATGATCAGTTACGTCGAAATGAGCTGGGTGGCCAGATACGGCTGGAGCAGGAGAAGATCG GGTTTGAGTGGCTGGTTGAGGCGCTGGGGAGGATTTAA
Upstream 100 bases:
>100_bases GGGAAATCCAGCATGCAATTAACCGCTGAAACGGGCGATAACGTCAGTAGTTTTTCCGATCGTATTATCGATAAAATCGT GCGACAATCGCGAAAGGGAG
Downstream 100 bases:
>100_bases GCCCATCACCACTCCTTCTCAATGCGCTCTCTCTTCGGAACTGTATTGCCGGCAACCTGCCTGAAATGTCCGCCATCGAG AGCCTTCATAAACGCTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MRDWLQAKIFITENEINFQAFPEVPEAMVIFGAGYGFENMASVEWMRDRKIHYWGDIDTHGMAILNQLRRFFPQAASLLM EHETLMEHQPLWGAEPSPETGTLSRLTAEERALYDQLRRNELGGQIRLEQEKIGFEWLVEALGRI
Sequences:
>Translated_145_residues MRDWLQAKIFITENEINFQAFPEVPEAMVIFGAGYGFENMASVEWMRDRKIHYWGDIDTHGMAILNQLRRFFPQAASLLM EHETLMEHQPLWGAEPSPETGTLSRLTAEERALYDQLRRNELGGQIRLEQEKIGFEWLVEALGRI >Mature_145_residues MRDWLQAKIFITENEINFQAFPEVPEAMVIFGAGYGFENMASVEWMRDRKIHYWGDIDTHGMAILNQLRRFFPQAASLLM EHETLMEHQPLWGAEPSPETGTLSRLTAEERALYDQLRRNELGGQIRLEQEKIGFEWLVEALGRI
Specific function: Unknown
COG id: COG4924
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16925; Mature: 16925
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDWLQAKIFITENEINFQAFPEVPEAMVIFGAGYGFENMASVEWMRDRKIHYWGDIDTH CCCCCEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCH GMAILNQLRRFFPQAASLLMEHETLMEHQPLWGAEPSPETGTLSRLTAEERALYDQLRRN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELGGQIRLEQEKIGFEWLVEALGRI HCCCEEEEHHHHCCHHHHHHHHCCC >Mature Secondary Structure MRDWLQAKIFITENEINFQAFPEVPEAMVIFGAGYGFENMASVEWMRDRKIHYWGDIDTH CCCCCEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCH GMAILNQLRRFFPQAASLLMEHETLMEHQPLWGAEPSPETGTLSRLTAEERALYDQLRRN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELGGQIRLEQEKIGFEWLVEALGRI HCCCEEEEHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA