| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357170
Identifier: 119357170
GI number: 119357170
Start: 1555284
End: 1555832
Strand: Reverse
Name: 119357170
Synonym: Cpha266_1359
Alternate gene names: NA
Gene position: 1555832-1555284 (Counterclockwise)
Preceding gene: 119357171
Following gene: 119357169
Centisome position: 49.65
GC content: 43.53
Gene sequence:
>549_bases GTGAAAAAACATGTTAAAAGGAGAATTACGATTAAAAAAAGTATCTGGATTGCTGTCGGTATTACAGGAATGCTTCTTGG AAGCGCCCCTGATAATGCCCAGGCGGCTGTAAACGTGCAGATCAGCACAGGAAACAGACAGTCATTCGTGATGGATTCAC GACCGAGTTTTATCGATTTGGGGGATCTGGGTTTTTCCGTATCGATAGGAAGTCCATATGACATCATTTTTTACGGAAAC AGGTATTACCTCTACAATAACAGTCGATGGTACCGTTCTTCAAATTATCGCGGTCCGTGGCGTGTGGTGCAAGAGAGATA TCTCCCTGCCAAAATACGAACACACCGATGGACGGAGATCAGGAGGTATCGCGATGTCGAGTACAGCAGGCGGGATCAGC GGTTTGATTGGTATAAACAGGATCATAATAACATGAGGAATAACGTGAATAATCGCGATCAGCTTCATGACAGGAATAAC CGCAATAACGACGACAATAACCGGAACAACGATAATAATCGCCAGAATAACAACGGAAGAAAAAACTAA
Upstream 100 bases:
>100_bases GAGCATGAGACCAATGGTTGTATGGATAATGAGAAATCCGAAAGAAGTTGATGAAACCGGGAGGATATCGGACCTCAGGG GCAGACAGGTGTATTCATCA
Downstream 100 bases:
>100_bases GTAGAGCAATAGTACATCGTGTAAGCAAAAAGGGAATCGAAGATGATTTTGGTTCCCTTTTTAGATGTGAATGCGCGGGA TGATATGCAAATAATCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKKHVKRRITIKKSIWIAVGITGMLLGSAPDNAQAAVNVQISTGNRQSFVMDSRPSFIDLGDLGFSVSIGSPYDIIFYGN RYYLYNNSRWYRSSNYRGPWRVVQERYLPAKIRTHRWTEIRRYRDVEYSRRDQRFDWYKQDHNNMRNNVNNRDQLHDRNN RNNDDNNRNNDNNRQNNNGRKN
Sequences:
>Translated_182_residues MKKHVKRRITIKKSIWIAVGITGMLLGSAPDNAQAAVNVQISTGNRQSFVMDSRPSFIDLGDLGFSVSIGSPYDIIFYGN RYYLYNNSRWYRSSNYRGPWRVVQERYLPAKIRTHRWTEIRRYRDVEYSRRDQRFDWYKQDHNNMRNNVNNRDQLHDRNN RNNDDNNRNNDNNRQNNNGRKN >Mature_182_residues MKKHVKRRITIKKSIWIAVGITGMLLGSAPDNAQAAVNVQISTGNRQSFVMDSRPSFIDLGDLGFSVSIGSPYDIIFYGN RYYLYNNSRWYRSSNYRGPWRVVQERYLPAKIRTHRWTEIRRYRDVEYSRRDQRFDWYKQDHNNMRNNVNNRDQLHDRNN RNNDDNNRNNDNNRQNNNGRKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21850; Mature: 21850
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHVKRRITIKKSIWIAVGITGMLLGSAPDNAQAAVNVQISTGNRQSFVMDSRPSFIDL CCCCHHHEEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCEEEE GDLGFSVSIGSPYDIIFYGNRYYLYNNSRWYRSSNYRGPWRVVQERYLPAKIRTHRWTEI CCCCEEEECCCCEEEEEECCEEEEECCCEEEECCCCCCHHHHHHHHCCCCHHCCCHHHHH RRYRDVEYSRRDQRFDWYKQDHNNMRNNVNNRDQLHDRNNRNNDDNNRNNDNNRQNNNGR HHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC KN CC >Mature Secondary Structure MKKHVKRRITIKKSIWIAVGITGMLLGSAPDNAQAAVNVQISTGNRQSFVMDSRPSFIDL CCCCHHHEEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCEEEE GDLGFSVSIGSPYDIIFYGNRYYLYNNSRWYRSSNYRGPWRVVQERYLPAKIRTHRWTEI CCCCEEEECCCCEEEEEECCEEEEECCCEEEECCCCCCHHHHHHHHCCCCHHCCCHHHHH RRYRDVEYSRRDQRFDWYKQDHNNMRNNVNNRDQLHDRNNRNNDDNNRNNDNNRQNNNGR HHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC KN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA