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The map label for this gene is ygfA [H]

Identifier: 119357145

GI number: 119357145

Start: 1529622

End: 1530272

Strand: Reverse

Name: ygfA [H]

Synonym: Cpha266_1334

Alternate gene names: 119357145

Gene position: 1530272-1529622 (Counterclockwise)

Preceding gene: 119357150

Following gene: 119357144

Centisome position: 48.83

GC content: 49.62

Gene sequence:

>651_bases
GTGCCGTACAAAGAGCTATCCGGCAAAGCTGAAAATGATACCCCGACTGGCGGAAGTGAGGCTGCAGGTGCTGAAAAGCA
AACTTTGAGAAAAAAAATTCTTGCCGAAAGGCTTCTTCTCACTGAAGAGGTTTGGCTGCAGAAAAGCAGGGAAATTGCCG
ATGCGGTGCAACGGCTTCCCGAGTTTCCGCTCTTCAGACATGTTCTTGGATATCTGCCGCTTGCAGATCGCAGGGAGGTA
GATACTTCGGAACTTTTTGCTTTGCTGGCCCGGTTCGGAAAACAGGTTTCGATACCGGTGATCGCAGGAGGCGAACTTGT
AACGGCGGCTTATCGTGACCACGAACCATTGACAACCGGGATTTTCGGTCAATCCGAACCTCTTCGACCGGTTATGAGTG
ATGAACGGTCGCTTGATGCCGTTCTTGTTCCGGTTGTTGCCGCTGATCATCGCGGATACCGGCTTGGATACGGCAAAGGA
TTTTATGACCGTTTTTTCTCTCGTCTTGCGAAAGCAGAATGTAATCCTTTGCGTATCGGCCTTGCGTTTTACATGCAGAT
TCTGCCCAGGATACCGGTAGACCCCTGGGATCAGCCGCTTGACTACATCGTTCATGAACAGGGAGTTTTTCAATACAACT
ATTGTCATTAA

Upstream 100 bases:

>100_bases
AACCTTTCCGGCTTGTCGTTTACTTCACAAGGATAATAACGCGTTAAGTTTTATATCTTGTTTTTCTGTGCATCGTTTAT
ATAACAAATCTTATTCACCC

Downstream 100 bases:

>100_bases
TTGTACTCATGCAATATGCACCTGAAAATAACGGAATTGCCATTGAACCGCCCGATCTTCACCATACGGCTTATTATGTC
AATCGTGAGCTGAGCTGGAT

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPYKELSGKAENDTPTGGSEAAGAEKQTLRKKILAERLLLTEEVWLQKSREIADAVQRLPEFPLFRHVLGYLPLADRREV
DTSELFALLARFGKQVSIPVIAGGELVTAAYRDHEPLTTGIFGQSEPLRPVMSDERSLDAVLVPVVAADHRGYRLGYGKG
FYDRFFSRLAKAECNPLRIGLAFYMQILPRIPVDPWDQPLDYIVHEQGVFQYNYCH

Sequences:

>Translated_216_residues
MPYKELSGKAENDTPTGGSEAAGAEKQTLRKKILAERLLLTEEVWLQKSREIADAVQRLPEFPLFRHVLGYLPLADRREV
DTSELFALLARFGKQVSIPVIAGGELVTAAYRDHEPLTTGIFGQSEPLRPVMSDERSLDAVLVPVVAADHRGYRLGYGKG
FYDRFFSRLAKAECNPLRIGLAFYMQILPRIPVDPWDQPLDYIVHEQGVFQYNYCH
>Mature_215_residues
PYKELSGKAENDTPTGGSEAAGAEKQTLRKKILAERLLLTEEVWLQKSREIADAVQRLPEFPLFRHVLGYLPLADRREVD
TSELFALLARFGKQVSIPVIAGGELVTAAYRDHEPLTTGIFGQSEPLRPVMSDERSLDAVLVPVVAADHRGYRLGYGKGF
YDRFFSRLAKAECNPLRIGLAFYMQILPRIPVDPWDQPLDYIVHEQGVFQYNYCH

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=140, Percent_Identity=34.2857142857143, Blast_Score=72, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17510857, Length=139, Percent_Identity=35.2517985611511, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 24420; Mature: 24289

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYKELSGKAENDTPTGGSEAAGAEKQTLRKKILAERLLLTEEVWLQKSREIADAVQRLP
CCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EFPLFRHVLGYLPLADRREVDTSELFALLARFGKQVSIPVIAGGELVTAAYRDHEPLTTG
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEHHHHCCCCCEEC
IFGQSEPLRPVMSDERSLDAVLVPVVAADHRGYRLGYGKGFYDRFFSRLAKAECNPLRIG
CCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCCCCEEHH
LAFYMQILPRIPVDPWDQPLDYIVHEQGVFQYNYCH
HHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEECCCC
>Mature Secondary Structure 
PYKELSGKAENDTPTGGSEAAGAEKQTLRKKILAERLLLTEEVWLQKSREIADAVQRLP
CCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EFPLFRHVLGYLPLADRREVDTSELFALLARFGKQVSIPVIAGGELVTAAYRDHEPLTTG
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEHHHHCCCCCEEC
IFGQSEPLRPVMSDERSLDAVLVPVVAADHRGYRLGYGKGFYDRFFSRLAKAECNPLRIG
CCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCCCCEEHH
LAFYMQILPRIPVDPWDQPLDYIVHEQGVFQYNYCH
HHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]