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The map label for this gene is blc [C]

Identifier: 119357124

GI number: 119357124

Start: 1506053

End: 1506532

Strand: Reverse

Name: blc [C]

Synonym: Cpha266_1313

Alternate gene names: 119357124

Gene position: 1506532-1506053 (Counterclockwise)

Preceding gene: 119357127

Following gene: 119357123

Centisome position: 48.07

GC content: 47.5

Gene sequence:

>480_bases
ATGTTTTCAAGAATTTTTGGAAAAAAAACATCATCCGCGGTATATCAAACCGTAGCAACTGTCGATGTAGCCCGTTATTG
CGGAACCTGGTACGAGATTGCATCATTTCCGAGTCGTCAGCAAAAGCGATGCATGAAGACGAAAGCCGAATATACGCTGT
CCGATAACGGGACTGTGGCTGTGCGCAATTCATGCAGACGAGGAAAAAGAGAGGCTTCGATAAAGGCTGTAGCATCGGCG
GTGCCGGGTACGGGTAATGCAAAACTGAAAGTGATCTTTTTCGGATTCATCAAAGCTGATTACTGGGTTATCGATCTCGC
CCCTGATTACTCATGGGCAGCAGTTTCGAATCCTGCGGGTTCAAGGTTATGGCTCCTCAGCCGGACGCCCTATATGGAAG
AATCGCTCTATACGGATATTGTCAATAAGCTTGCCGTGAAGGGGCTGGATATTTCAAAACTCTCCAGAACCGCTCAGTAG

Upstream 100 bases:

>100_bases
TGCCGGTTGTTCATGAACTTCCCGAGTCCGTTCGTTGTTACATCACATGAACTCTTAAGCCATATTTTTTTACACGGATA
TAATTTCATCAATAAGCATC

Downstream 100 bases:

>100_bases
GCTGATTCTGAAAGGGAGGGCAGGAGGATCTTTTTTTTTGTTGCACAAGTTACGCGAGTCGCTTATACTTGTCGGTTGTT
TTTTTGCGTGTTGTTCTAAA

Product: Lipocalin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MFSRIFGKKTSSAVYQTVATVDVARYCGTWYEIASFPSRQQKRCMKTKAEYTLSDNGTVAVRNSCRRGKREASIKAVASA
VPGTGNAKLKVIFFGFIKADYWVIDLAPDYSWAAVSNPAGSRLWLLSRTPYMEESLYTDIVNKLAVKGLDISKLSRTAQ

Sequences:

>Translated_159_residues
MFSRIFGKKTSSAVYQTVATVDVARYCGTWYEIASFPSRQQKRCMKTKAEYTLSDNGTVAVRNSCRRGKREASIKAVASA
VPGTGNAKLKVIFFGFIKADYWVIDLAPDYSWAAVSNPAGSRLWLLSRTPYMEESLYTDIVNKLAVKGLDISKLSRTAQ
>Mature_159_residues
MFSRIFGKKTSSAVYQTVATVDVARYCGTWYEIASFPSRQQKRCMKTKAEYTLSDNGTVAVRNSCRRGKREASIKAVASA
VPGTGNAKLKVIFFGFIKADYWVIDLAPDYSWAAVSNPAGSRLWLLSRTPYMEESLYTDIVNKLAVKGLDISKLSRTAQ

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=141, Percent_Identity=36.1702127659575, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272
- InterPro:   IPR002449 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 17682; Mature: 17682

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRIFGKKTSSAVYQTVATVDVARYCGTWYEIASFPSRQQKRCMKTKAEYTLSDNGTVA
CCCCHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHCCEEECCCCEEE
VRNSCRRGKREASIKAVASAVPGTGNAKLKVIFFGFIKADYWVIDLAPDYSWAAVSNPAG
ECCHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEEEECCCCCCEEEECCCCC
SRLWLLSRTPYMEESLYTDIVNKLAVKGLDISKLSRTAQ
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MFSRIFGKKTSSAVYQTVATVDVARYCGTWYEIASFPSRQQKRCMKTKAEYTLSDNGTVA
CCCCHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHCCEEECCCCEEE
VRNSCRRGKREASIKAVASAVPGTGNAKLKVIFFGFIKADYWVIDLAPDYSWAAVSNPAG
ECCHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEEEECCCCCCEEEECCCCC
SRLWLLSRTPYMEESLYTDIVNKLAVKGLDISKLSRTAQ
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7559452 [H]