| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yjeF [H]
Identifier: 119357077
GI number: 119357077
Start: 1437957
End: 1439540
Strand: Reverse
Name: yjeF [H]
Synonym: Cpha266_1264
Alternate gene names: 119357077
Gene position: 1439540-1437957 (Counterclockwise)
Preceding gene: 119357078
Following gene: 119357074
Centisome position: 45.93
GC content: 51.39
Gene sequence:
>1584_bases ATGCTGCCTGTCGTAACGGCTATTGAGATGTCGAAGGCCGATAAAGCGGCCATTGAGGAACTCCGTATAGGTGAGAGTCG TCTCATGGAGCTTGCAGGCAGCGAAGCGGCCGATATCATTCTGAAGGCTCTCGAAAAAAACGATAATCCCGAAGGTTGCT CGTTTCTTGTGGTGTGCGGAAAAGGAAATAACGGCGGTGACGGTTTTGTTGTTGCCCGACACCTTCTTAACCGCGGCGCT ACGGTAGACGTTGTGCTGCTTTGCCCCCCGGAAACCCTTAAGCCTGTCAACAGGGAGGGGTATCTGATCCTTGAGGCTTA CAGGCATCATAATGAGCCTCTTCGGATTTTTCATGGCATTGAAGAAGCAATTGACAGCATAACTGAAACCGGTTATTCTG CGCTGATCGACGGCATTCTCGGTACAGGTCTTCGAATCACTCAGGCTGGCGAAGCACTGCCTGAACCGATCGCCTCTGCG ATTACGCTGCTCAACACCCTTCGCCATAACTCGGACGCTCTCATAGCAGCTCTTGATGTTCCTTCAGGTCTGGATGCCAC GACAGGGCTCTCTGCTTCGCCTGCTGTGATTGCAGACCTCACCGTAACCATGGCATTTCTGAAAACCGGTTTTTTTTTCA ATGAGGGCCCCCTTCATTGCGGCGATCTTCATACTGCCGAAATATCAATACCCCGTTTTATTGCTGAACCGGTATCCACG CTTTTGACGGACGGGGAGTTCGCTGCCGAACAGTTCATCATGCGAAATCCCGCCGCGGCAAAACATCAAAACGGAAAAGT TCTGATTATTGCCGGGTCAATATCTTCAACATCTTCCATGATCGGGGCTGCAATGCTTGCTGTAAAAGCAGCATTAAAAA CAGGTGCCGGCTACGTTTGCGTTTCACTGCCGCTGACGCATGCCGCTGCAATGCACGCATTTGCTCCCGGAGCTGTAGTT ATCGGACGGGATCTTGACGTTATAGCAGAAAAAGCCCGATGGGCTGACGCTGTGCTGATAGGATGCGGACTTGGCAGGGA TAGTGCATCCGTGAGCTTTATTGCCGATCTGCTTCAACGAAAGGAGATTGCCGCCAATAAACTTGTCATTGACGCCGACG CGCTCTATGCGCTCGCTTTACCGGATCTTTCGTCGTTATCGTTTGGGTTTTCCGATGCTATCCTGACACCGCATTACGGA GAGATGAGTCGACTGAGCGGCTTCTCGGTGGAAAGCATTGCCTGCGATCCTCTTGATACGGCAAGAACGTATGCTGAAAA ACATCGGGTAAATCTGCTTCTGAAAGGATATCCAACTGTAATTGCAGCGCCTTCCGATCCGGTGCTCCTGAATACTACAG GCACAGATGCTCTGGGAACGGCCGGTTCGGGAGATATTCTTTCGGGAATGATTGCCGCCCTTGCCGCCAAAGGAGCAACA ACCTTCAATGCCGGCGCTGCCGCTGCCTGGTTTCATGGAAGGGCCGGCGATCTTGCCGGAACCATATCAAGCATTGTTTC CGCTGAAGATATTCTCGAAGCGATCCCGTCTGCCATTCAGGAAATTTTTCATATAGAAGAATAA
Upstream 100 bases:
>100_bases GCGTTTTTCGACTGAAGAGTTGCTTGAAGCCTACTATGATGCGCTTGAGCAGGCACTTCATCTCGATGAACTGTAACAAG AAAAAGAAGGAAACGGTGTC
Downstream 100 bases:
>100_bases GTCAAAAGCGACCGGGGTTCCGTCCCTGTCAAGCATACGCGGCAAACCCGATACCCCGCCAGGCCTTTGACATCAGCAAA AAGAACAACGTAACGGGGCG
Product: carbohydrate kinase, YjeF related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCGKGNNGGDGFVVARHLLNRGA TVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGIEEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASA ITLLNTLRHNSDALIAALDVPSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVCVSLPLTHAAAMHAFAPGAVV IGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQRKEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYG EMSRLSGFSVESIACDPLDTARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE
Sequences:
>Translated_527_residues MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCGKGNNGGDGFVVARHLLNRGA TVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGIEEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASA ITLLNTLRHNSDALIAALDVPSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVCVSLPLTHAAAMHAFAPGAVV IGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQRKEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYG EMSRLSGFSVESIACDPLDTARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE >Mature_527_residues MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCGKGNNGGDGFVVARHLLNRGA TVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGIEEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASA ITLLNTLRHNSDALIAALDVPSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVCVSLPLTHAAAMHAFAPGAVV IGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQRKEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYG EMSRLSGFSVESIACDPLDTARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=491, Percent_Identity=31.5682281059063, Blast_Score=181, Evalue=1e-46, Organism=Drosophila melanogaster, GI221329809, Length=192, Percent_Identity=27.6041666666667, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 54925; Mature: 54925
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCG CCCEEEEHHHCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEE KGNNGGDGFVVARHLLNRGATVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGI CCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHCCCCCCCCEEEEEHHHCCCCHHHHHHHH EEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASAITLLNTLRHNSDALIAALDV HHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC PSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEECCHHHHHHHHHH LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVC HHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE VSLPLTHAAAMHAFAPGAVVIGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQR EECCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHH KEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYGEMSRLSGFSVESIACDPLDT HHHHHCEEEEECCCEEEEECCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCHH ARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT HHHHHHHHHEEEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE CCCCCCEEHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCG CCCEEEEHHHCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEE KGNNGGDGFVVARHLLNRGATVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGI CCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHCCCCCCCCEEEEEHHHCCCCHHHHHHHH EEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASAITLLNTLRHNSDALIAALDV HHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC PSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEECCHHHHHHHHHH LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVC HHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE VSLPLTHAAAMHAFAPGAVVIGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQR EECCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHH KEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYGEMSRLSGFSVESIACDPLDT HHHHHCEEEEECCCEEEEECCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCHH ARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT HHHHHHHHHEEEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE CCCCCCEEHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 7511774 [H]