Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is yjeF [H]

Identifier: 119357077

GI number: 119357077

Start: 1437957

End: 1439540

Strand: Reverse

Name: yjeF [H]

Synonym: Cpha266_1264

Alternate gene names: 119357077

Gene position: 1439540-1437957 (Counterclockwise)

Preceding gene: 119357078

Following gene: 119357074

Centisome position: 45.93

GC content: 51.39

Gene sequence:

>1584_bases
ATGCTGCCTGTCGTAACGGCTATTGAGATGTCGAAGGCCGATAAAGCGGCCATTGAGGAACTCCGTATAGGTGAGAGTCG
TCTCATGGAGCTTGCAGGCAGCGAAGCGGCCGATATCATTCTGAAGGCTCTCGAAAAAAACGATAATCCCGAAGGTTGCT
CGTTTCTTGTGGTGTGCGGAAAAGGAAATAACGGCGGTGACGGTTTTGTTGTTGCCCGACACCTTCTTAACCGCGGCGCT
ACGGTAGACGTTGTGCTGCTTTGCCCCCCGGAAACCCTTAAGCCTGTCAACAGGGAGGGGTATCTGATCCTTGAGGCTTA
CAGGCATCATAATGAGCCTCTTCGGATTTTTCATGGCATTGAAGAAGCAATTGACAGCATAACTGAAACCGGTTATTCTG
CGCTGATCGACGGCATTCTCGGTACAGGTCTTCGAATCACTCAGGCTGGCGAAGCACTGCCTGAACCGATCGCCTCTGCG
ATTACGCTGCTCAACACCCTTCGCCATAACTCGGACGCTCTCATAGCAGCTCTTGATGTTCCTTCAGGTCTGGATGCCAC
GACAGGGCTCTCTGCTTCGCCTGCTGTGATTGCAGACCTCACCGTAACCATGGCATTTCTGAAAACCGGTTTTTTTTTCA
ATGAGGGCCCCCTTCATTGCGGCGATCTTCATACTGCCGAAATATCAATACCCCGTTTTATTGCTGAACCGGTATCCACG
CTTTTGACGGACGGGGAGTTCGCTGCCGAACAGTTCATCATGCGAAATCCCGCCGCGGCAAAACATCAAAACGGAAAAGT
TCTGATTATTGCCGGGTCAATATCTTCAACATCTTCCATGATCGGGGCTGCAATGCTTGCTGTAAAAGCAGCATTAAAAA
CAGGTGCCGGCTACGTTTGCGTTTCACTGCCGCTGACGCATGCCGCTGCAATGCACGCATTTGCTCCCGGAGCTGTAGTT
ATCGGACGGGATCTTGACGTTATAGCAGAAAAAGCCCGATGGGCTGACGCTGTGCTGATAGGATGCGGACTTGGCAGGGA
TAGTGCATCCGTGAGCTTTATTGCCGATCTGCTTCAACGAAAGGAGATTGCCGCCAATAAACTTGTCATTGACGCCGACG
CGCTCTATGCGCTCGCTTTACCGGATCTTTCGTCGTTATCGTTTGGGTTTTCCGATGCTATCCTGACACCGCATTACGGA
GAGATGAGTCGACTGAGCGGCTTCTCGGTGGAAAGCATTGCCTGCGATCCTCTTGATACGGCAAGAACGTATGCTGAAAA
ACATCGGGTAAATCTGCTTCTGAAAGGATATCCAACTGTAATTGCAGCGCCTTCCGATCCGGTGCTCCTGAATACTACAG
GCACAGATGCTCTGGGAACGGCCGGTTCGGGAGATATTCTTTCGGGAATGATTGCCGCCCTTGCCGCCAAAGGAGCAACA
ACCTTCAATGCCGGCGCTGCCGCTGCCTGGTTTCATGGAAGGGCCGGCGATCTTGCCGGAACCATATCAAGCATTGTTTC
CGCTGAAGATATTCTCGAAGCGATCCCGTCTGCCATTCAGGAAATTTTTCATATAGAAGAATAA

Upstream 100 bases:

>100_bases
GCGTTTTTCGACTGAAGAGTTGCTTGAAGCCTACTATGATGCGCTTGAGCAGGCACTTCATCTCGATGAACTGTAACAAG
AAAAAGAAGGAAACGGTGTC

Downstream 100 bases:

>100_bases
GTCAAAAGCGACCGGGGTTCCGTCCCTGTCAAGCATACGCGGCAAACCCGATACCCCGCCAGGCCTTTGACATCAGCAAA
AAGAACAACGTAACGGGGCG

Product: carbohydrate kinase, YjeF related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCGKGNNGGDGFVVARHLLNRGA
TVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGIEEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASA
ITLLNTLRHNSDALIAALDVPSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST
LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVCVSLPLTHAAAMHAFAPGAVV
IGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQRKEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYG
EMSRLSGFSVESIACDPLDTARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT
TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE

Sequences:

>Translated_527_residues
MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCGKGNNGGDGFVVARHLLNRGA
TVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGIEEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASA
ITLLNTLRHNSDALIAALDVPSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST
LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVCVSLPLTHAAAMHAFAPGAVV
IGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQRKEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYG
EMSRLSGFSVESIACDPLDTARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT
TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE
>Mature_527_residues
MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCGKGNNGGDGFVVARHLLNRGA
TVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGIEEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASA
ITLLNTLRHNSDALIAALDVPSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST
LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVCVSLPLTHAAAMHAFAPGAVV
IGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQRKEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYG
EMSRLSGFSVESIACDPLDTARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT
TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=491, Percent_Identity=31.5682281059063, Blast_Score=181, Evalue=1e-46,
Organism=Drosophila melanogaster, GI221329809, Length=192, Percent_Identity=27.6041666666667, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 54925; Mature: 54925

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCG
CCCEEEEHHHCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEE
KGNNGGDGFVVARHLLNRGATVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGI
CCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHCCCCCCCCEEEEEHHHCCCCHHHHHHHH
EEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASAITLLNTLRHNSDALIAALDV
HHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
PSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEECCHHHHHHHHHH
LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVC
HHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE
VSLPLTHAAAMHAFAPGAVVIGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQR
EECCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHH
KEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYGEMSRLSGFSVESIACDPLDT
HHHHHCEEEEECCCEEEEECCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCHH
ARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT
HHHHHHHHHEEEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE
CCCCCCEEHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLPVVTAIEMSKADKAAIEELRIGESRLMELAGSEAADIILKALEKNDNPEGCSFLVVCG
CCCEEEEHHHCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEE
KGNNGGDGFVVARHLLNRGATVDVVLLCPPETLKPVNREGYLILEAYRHHNEPLRIFHGI
CCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHCCCCCCCCEEEEEHHHCCCCHHHHHHHH
EEAIDSITETGYSALIDGILGTGLRITQAGEALPEPIASAITLLNTLRHNSDALIAALDV
HHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
PSGLDATTGLSASPAVIADLTVTMAFLKTGFFFNEGPLHCGDLHTAEISIPRFIAEPVST
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEECCHHHHHHHHHH
LLTDGEFAAEQFIMRNPAAAKHQNGKVLIIAGSISSTSSMIGAAMLAVKAALKTGAGYVC
HHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE
VSLPLTHAAAMHAFAPGAVVIGRDLDVIAEKARWADAVLIGCGLGRDSASVSFIADLLQR
EECCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHH
KEIAANKLVIDADALYALALPDLSSLSFGFSDAILTPHYGEMSRLSGFSVESIACDPLDT
HHHHHCEEEEECCCEEEEECCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCHH
ARTYAEKHRVNLLLKGYPTVIAAPSDPVLLNTTGTDALGTAGSGDILSGMIAALAAKGAT
HHHHHHHHHEEEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
TFNAGAAAAWFHGRAGDLAGTISSIVSAEDILEAIPSAIQEIFHIEE
CCCCCCEEHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]