Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357070

Identifier: 119357070

GI number: 119357070

Start: 1429426

End: 1430439

Strand: Reverse

Name: 119357070

Synonym: Cpha266_1257

Alternate gene names: NA

Gene position: 1430439-1429426 (Counterclockwise)

Preceding gene: 119357071

Following gene: 119357069

Centisome position: 45.64

GC content: 48.22

Gene sequence:

>1014_bases
ATGACAAAAATTCTTCTTGCCGAAAAACTCAACGAATGCATTTCCCGATGGCGGACAGCAGGCATTGATGTTATCGGCCC
TGTAAAAAAACACAACAGCTCGCAGTTTGAGTCTGTACAGAGTGCGGCAGAGCTTGACTTAGGGCTCGTGCTTACTGATC
GCACCATCAAGGATCTGTTTTTCCCCAGGACGGAACCGATGGTTCGCTACCAGATCAAAAAGCATGCTATTGAGACAGAG
GAGTTTCTCCCTCCCGATCAAAAAAGAATCATTTTTGGCGTCCGTCCCTGTGACGCGTCCGGACTTGCCATTGACGATCC
GCTCTTCGGCTGGGACTACAAGGATGAGTACTGGTTCAATCGCCGAAATGAATCGGTTATGATAACCATTGCGTGCACAA
AGTCCGATGAGTTCTGCATGTGCACATCTCTCAAGCTTGCTCCCGACAGCAGCAAGGGTTCTGATATCCTGCTGCGCCCA
CTTGCCGATGAAAAGGGATGGCTGATAGAGGAGCTCTCGGATAGAGGCAAAGAGGCGTTTTCATCTATTGCAGATCTTCT
GATAGATGATTCGGCGCCGCTGGCTCCCCTGGCAGAAGTTCCGGTTAAATTTAATCTTGAAGCTTCGGTAGCATGGCTGA
AAAATCCGGAAAATTTTGACAGCCATTTCTGGAAAGAGATTTCAGCGCGATGCATCGGTTGCGGATCGTGCACCTTTCTC
TGTCCGACCTGCCACTGTTTCGACATTCAGGATGAAGGCGATATTTATAAGGGAATACGCCGCAAAAACTGGGACAGTTG
TTCTTTTGCGCTCTTTACCATGCACACCTCCGGCCATAACCCGAGAGTTACCCAGTCATCAAGGTGGCGGCAGCGCATCA
TGCATAAATTCAATTATTTTCCAGGCAAATTCGATATGAACAGTTGCAGCGGATGCGGACGGTGTACACGCCAGTGTCCT
GTTGATATGGGTATTACAGAAACTTTACAAGAGATATCAAAATTATCCAGGTGA

Upstream 100 bases:

>100_bases
GCTTTTGATCATTTTTCAGGAATGAGCGCAAGTCAGGAGCCTGTGTTGGCGAGTTTTAAAAAGGACGATCCGGAGACATT
CATTTTATAGGTTATTTTTT

Downstream 100 bases:

>100_bases
AAGAACACAACAGTAACGGACAGCAGAGCATCTACATGCCGGCAATCATGAAAATTGTCGCAAAGCGCGATGAAGCTCCC
GGCGTGAAAACATTAAGACT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: Sulfite Reductase Subunit A; Hydrogenase; Hydrogenase/Sulfur Reductase Beta Subunit; Ferredoxin; Anaerobic Sulfite Reductase; Hydrogenase/Sulfur Reductase Subunit Beta; Sulfite Reductase; Anaerobic Sulfite Reductase A Subunit; 4Fe-4S Ferredoxin; Cytochrome C3 Hydrogenase Alpha Chain; Sulfhydrogenase Beta Subunit; Sulfhydrogenase II Subunit B; Sulfhydrogenase II Beta Chain; Cytochrome-C3 Hydrogenase Alpha Chain; Hydrogenase Beta Subunit; Hydrogenase Subunit; Ferredoxin Subunit Of Sulfhydrogenase II; Ni/Fe Hydrogenase Beta Subunit; Anaerobic Sulfite Reduction Protein A Related Protein; ABC Transporter Permease; NiFe Hydrogenase Beta Subunit; Cytochrome-C3 Hydrogenase; Soluble Hydrogenase Alpha Or Beta Chain; Cytochrome C3 Hydrogenase Alpha; Ni/Fe Hydrogenase Subunit Beta; Sulfite Reductase Iron-Sulfur Subunit; NiFe Hydrogenase II Subunit Beta; [NiFe] Hydrogenase Beta Subunit; (NiFe) Hydrogenase Beta Subunit; 4Fe-4S Protein; H-II Hydrogenase Subunit Beta; NiFe Hydrogenase I Subunit Beta; Response Regulator Receiver Protein; NiFe-Hydrogenase Beta Subunit

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLFFPRTEPMVRYQIKKHAIETE
EFLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFNRRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRP
LADEKGWLIEELSDRGKEAFSSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFL
CPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYFPGKFDMNSCSGCGRCTRQCP
VDMGITETLQEISKLSR

Sequences:

>Translated_337_residues
MTKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLFFPRTEPMVRYQIKKHAIETE
EFLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFNRRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRP
LADEKGWLIEELSDRGKEAFSSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFL
CPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYFPGKFDMNSCSGCGRCTRQCP
VDMGITETLQEISKLSR
>Mature_336_residues
TKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLFFPRTEPMVRYQIKKHAIETEE
FLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFNRRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRPL
ADEKGWLIEELSDRGKEAFSSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFLC
PTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYFPGKFDMNSCSGCGRCTRQCPV
DMGITETLQEISKLSR

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38352; Mature: 38221

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLF
CCCHHHHHHHHHHHHHHHHCCCCEECCHHHCCCHHHHHHHHHHHCCEEEEEECCHHHHHH
FPRTEPMVRYQIKKHAIETEEFLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFN
CCCCCCHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCHHCC
RRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRPLADEKGWLIEELSDRGKEAF
CCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
SSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFL
HHHHHHHHCCCCCCCCHHHCCEEEECCEEEEEECCCCCHHHHHHHHHHHHEECCCCCEEE
CPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYF
CCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
PGKFDMNSCSGCGRCTRQCPVDMGITETLQEISKLSR
CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLF
CCHHHHHHHHHHHHHHHHCCCCEECCHHHCCCHHHHHHHHHHHCCEEEEEECCHHHHHH
FPRTEPMVRYQIKKHAIETEEFLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFN
CCCCCCHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCHHCC
RRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRPLADEKGWLIEELSDRGKEAF
CCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
SSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFL
HHHHHHHHCCCCCCCCHHHCCEEEECCEEEEEECCCCCHHHHHHHHHHHHEECCCCCEEE
CPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYF
CCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
PGKFDMNSCSGCGRCTRQCPVDMGITETLQEISKLSR
CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA