| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357070
Identifier: 119357070
GI number: 119357070
Start: 1429426
End: 1430439
Strand: Reverse
Name: 119357070
Synonym: Cpha266_1257
Alternate gene names: NA
Gene position: 1430439-1429426 (Counterclockwise)
Preceding gene: 119357071
Following gene: 119357069
Centisome position: 45.64
GC content: 48.22
Gene sequence:
>1014_bases ATGACAAAAATTCTTCTTGCCGAAAAACTCAACGAATGCATTTCCCGATGGCGGACAGCAGGCATTGATGTTATCGGCCC TGTAAAAAAACACAACAGCTCGCAGTTTGAGTCTGTACAGAGTGCGGCAGAGCTTGACTTAGGGCTCGTGCTTACTGATC GCACCATCAAGGATCTGTTTTTCCCCAGGACGGAACCGATGGTTCGCTACCAGATCAAAAAGCATGCTATTGAGACAGAG GAGTTTCTCCCTCCCGATCAAAAAAGAATCATTTTTGGCGTCCGTCCCTGTGACGCGTCCGGACTTGCCATTGACGATCC GCTCTTCGGCTGGGACTACAAGGATGAGTACTGGTTCAATCGCCGAAATGAATCGGTTATGATAACCATTGCGTGCACAA AGTCCGATGAGTTCTGCATGTGCACATCTCTCAAGCTTGCTCCCGACAGCAGCAAGGGTTCTGATATCCTGCTGCGCCCA CTTGCCGATGAAAAGGGATGGCTGATAGAGGAGCTCTCGGATAGAGGCAAAGAGGCGTTTTCATCTATTGCAGATCTTCT GATAGATGATTCGGCGCCGCTGGCTCCCCTGGCAGAAGTTCCGGTTAAATTTAATCTTGAAGCTTCGGTAGCATGGCTGA AAAATCCGGAAAATTTTGACAGCCATTTCTGGAAAGAGATTTCAGCGCGATGCATCGGTTGCGGATCGTGCACCTTTCTC TGTCCGACCTGCCACTGTTTCGACATTCAGGATGAAGGCGATATTTATAAGGGAATACGCCGCAAAAACTGGGACAGTTG TTCTTTTGCGCTCTTTACCATGCACACCTCCGGCCATAACCCGAGAGTTACCCAGTCATCAAGGTGGCGGCAGCGCATCA TGCATAAATTCAATTATTTTCCAGGCAAATTCGATATGAACAGTTGCAGCGGATGCGGACGGTGTACACGCCAGTGTCCT GTTGATATGGGTATTACAGAAACTTTACAAGAGATATCAAAATTATCCAGGTGA
Upstream 100 bases:
>100_bases GCTTTTGATCATTTTTCAGGAATGAGCGCAAGTCAGGAGCCTGTGTTGGCGAGTTTTAAAAAGGACGATCCGGAGACATT CATTTTATAGGTTATTTTTT
Downstream 100 bases:
>100_bases AAGAACACAACAGTAACGGACAGCAGAGCATCTACATGCCGGCAATCATGAAAATTGTCGCAAAGCGCGATGAAGCTCCC GGCGTGAAAACATTAAGACT
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: Sulfite Reductase Subunit A; Hydrogenase; Hydrogenase/Sulfur Reductase Beta Subunit; Ferredoxin; Anaerobic Sulfite Reductase; Hydrogenase/Sulfur Reductase Subunit Beta; Sulfite Reductase; Anaerobic Sulfite Reductase A Subunit; 4Fe-4S Ferredoxin; Cytochrome C3 Hydrogenase Alpha Chain; Sulfhydrogenase Beta Subunit; Sulfhydrogenase II Subunit B; Sulfhydrogenase II Beta Chain; Cytochrome-C3 Hydrogenase Alpha Chain; Hydrogenase Beta Subunit; Hydrogenase Subunit; Ferredoxin Subunit Of Sulfhydrogenase II; Ni/Fe Hydrogenase Beta Subunit; Anaerobic Sulfite Reduction Protein A Related Protein; ABC Transporter Permease; NiFe Hydrogenase Beta Subunit; Cytochrome-C3 Hydrogenase; Soluble Hydrogenase Alpha Or Beta Chain; Cytochrome C3 Hydrogenase Alpha; Ni/Fe Hydrogenase Subunit Beta; Sulfite Reductase Iron-Sulfur Subunit; NiFe Hydrogenase II Subunit Beta; [NiFe] Hydrogenase Beta Subunit; (NiFe) Hydrogenase Beta Subunit; 4Fe-4S Protein; H-II Hydrogenase Subunit Beta; NiFe Hydrogenase I Subunit Beta; Response Regulator Receiver Protein; NiFe-Hydrogenase Beta Subunit
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLFFPRTEPMVRYQIKKHAIETE EFLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFNRRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRP LADEKGWLIEELSDRGKEAFSSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFL CPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYFPGKFDMNSCSGCGRCTRQCP VDMGITETLQEISKLSR
Sequences:
>Translated_337_residues MTKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLFFPRTEPMVRYQIKKHAIETE EFLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFNRRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRP LADEKGWLIEELSDRGKEAFSSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFL CPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYFPGKFDMNSCSGCGRCTRQCP VDMGITETLQEISKLSR >Mature_336_residues TKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLFFPRTEPMVRYQIKKHAIETEE FLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFNRRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRPL ADEKGWLIEELSDRGKEAFSSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFLC PTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYFPGKFDMNSCSGCGRCTRQCPV DMGITETLQEISKLSR
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38352; Mature: 38221
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLF CCCHHHHHHHHHHHHHHHHCCCCEECCHHHCCCHHHHHHHHHHHCCEEEEEECCHHHHHH FPRTEPMVRYQIKKHAIETEEFLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFN CCCCCCHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCHHCC RRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRPLADEKGWLIEELSDRGKEAF CCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH SSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFL HHHHHHHHCCCCCCCCHHHCCEEEECCEEEEEECCCCCHHHHHHHHHHHHEECCCCCEEE CPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYF CCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC PGKFDMNSCSGCGRCTRQCPVDMGITETLQEISKLSR CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TKILLAEKLNECISRWRTAGIDVIGPVKKHNSSQFESVQSAAELDLGLVLTDRTIKDLF CCHHHHHHHHHHHHHHHHCCCCEECCHHHCCCHHHHHHHHHHHCCEEEEEECCHHHHHH FPRTEPMVRYQIKKHAIETEEFLPPDQKRIIFGVRPCDASGLAIDDPLFGWDYKDEYWFN CCCCCCHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCHHCC RRNESVMITIACTKSDEFCMCTSLKLAPDSSKGSDILLRPLADEKGWLIEELSDRGKEAF CCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH SSIADLLIDDSAPLAPLAEVPVKFNLEASVAWLKNPENFDSHFWKEISARCIGCGSCTFL HHHHHHHHCCCCCCCCHHHCCEEEECCEEEEEECCCCCHHHHHHHHHHHHEECCCCCEEE CPTCHCFDIQDEGDIYKGIRRKNWDSCSFALFTMHTSGHNPRVTQSSRWRQRIMHKFNYF CCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC PGKFDMNSCSGCGRCTRQCPVDMGITETLQEISKLSR CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA