| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357032
Identifier: 119357032
GI number: 119357032
Start: 1383043
End: 1384278
Strand: Reverse
Name: 119357032
Synonym: Cpha266_1218
Alternate gene names: NA
Gene position: 1384278-1383043 (Counterclockwise)
Preceding gene: 119357033
Following gene: 119357029
Centisome position: 44.17
GC content: 51.94
Gene sequence:
>1236_bases ATGGCCAAAAAGAAAGCCCCTATACCCGACGCCCAAAAGGCACTGATCGACCAGCTTATTCGTGAAAGTGGCGGTCCGCA AGCATTGTTTGACAAGGGAGGGCTGCTTGATCAGCTCAAAAAGCGCTTTATCGAACAGGCGCTCGAAGCTGAAATGGACG AGCACCTTGGTTATCCGAAACATGCTCCGATGGTTCCCAACAGCGGGAATGCCCGTAATGGCCACGGTAGCAAAACCATC ATCGTTGACAGCGATCAACTGGAGATCAGTCCACCGCGAGATCGCAACAGCACCTTCGAACCACAACTGATTCCCAAGCG TCAGAAGCGGTTCAAGGGGTTCGATGAGAAGATCCTGGCTATGTATGCCCGAGGCATGAGTGTCCGGGACATGCAAGCCA TGCTGCTGGAACTCTATGAGGTGGAAGTCTCCGAAGCCCTCATCAGCAGTGTGACCGATACGGTACTCGATGATGTGCGG GCATGGCAGAGCCGTCCACTCGACCGGGTTTATCCTATCGTCTATTTCGATTGCATTGTCGTCAAGAGCCGTCAGGATGG CAAAGTGAGCAACAGGGCTGTCTATCTGGCTCTTACCGTGACCATGGAGGGCCATAAAGAACTGCTGGGCTTGTGGCTCT CCCAGAACGAAGGGGCCAAATTCTGGCTCGGGGTCATGAGCGAACTGCAAAACCGTGGTGTTCAGGATATTCTGATCGCC GCAGTTGACGGTCTTGTCGGGTTTCCCGATGCTATTGCCGCCGTGTTCCCGGCAACAGAAGTTCAGCTTTGCATCGTGCA CATGGTTCGTAACTCGACGAAATACGTCTCATGGAAAAACCGCAAGGAACTGTGTGCCGACCTGAAAACCATTTACGGAT CGAATACTCTGGAAGAAGCCGAACTGAGCCTGCAAGCCTTTGGAAAAAAGTGGGATAGCAAATATCCTACGGTCAGTCAG CTCTGGCATCGGCACTGGGAGAACATTGTGCCGTTTTTCGCCTATCCGAAACAAATCAGGAAGGTGATCTATACGACCAA TGCCATCGAATCCCTGAACCGGTCACTACGAAAAGTGCTGAAAACCAAAGGAGCTTTTCCCAATGACGAATCAATCATCA AGCTGATGTACCTGGCTATGCAGAACATCGCGAAGAAATGGACCTTGCCGCTCCGGGACTGGGGCTCGGTGATCAACCAG CTTTCTATTAAATTCGAGGGGAGAGTCCCTTTATGA
Upstream 100 bases:
>100_bases TGACAGATGACGGGACGCTCGCAACGTCGTAATCTTTGAGTCTGTAAGATAAAGTGTGTAAACGGTCATAGTTTCCTATC ATATAAAGAGGAGAAAAACT
Downstream 100 bases:
>100_bases AAACGACCGTTTACACACTTTTCTGAACTGACCCTAATCTTTTGTAAAAAAATCAGAAGCTGGCGGGCTTTTAAGGCTCT ACATTCTGCTTTCTTTGCTG
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MAKKKAPIPDAQKALIDQLIRESGGPQALFDKGGLLDQLKKRFIEQALEAEMDEHLGYPKHAPMVPNSGNARNGHGSKTI IVDSDQLEISPPRDRNSTFEPQLIPKRQKRFKGFDEKILAMYARGMSVRDMQAMLLELYEVEVSEALISSVTDTVLDDVR AWQSRPLDRVYPIVYFDCIVVKSRQDGKVSNRAVYLALTVTMEGHKELLGLWLSQNEGAKFWLGVMSELQNRGVQDILIA AVDGLVGFPDAIAAVFPATEVQLCIVHMVRNSTKYVSWKNRKELCADLKTIYGSNTLEEAELSLQAFGKKWDSKYPTVSQ LWHRHWENIVPFFAYPKQIRKVIYTTNAIESLNRSLRKVLKTKGAFPNDESIIKLMYLAMQNIAKKWTLPLRDWGSVINQ LSIKFEGRVPL
Sequences:
>Translated_411_residues MAKKKAPIPDAQKALIDQLIRESGGPQALFDKGGLLDQLKKRFIEQALEAEMDEHLGYPKHAPMVPNSGNARNGHGSKTI IVDSDQLEISPPRDRNSTFEPQLIPKRQKRFKGFDEKILAMYARGMSVRDMQAMLLELYEVEVSEALISSVTDTVLDDVR AWQSRPLDRVYPIVYFDCIVVKSRQDGKVSNRAVYLALTVTMEGHKELLGLWLSQNEGAKFWLGVMSELQNRGVQDILIA AVDGLVGFPDAIAAVFPATEVQLCIVHMVRNSTKYVSWKNRKELCADLKTIYGSNTLEEAELSLQAFGKKWDSKYPTVSQ LWHRHWENIVPFFAYPKQIRKVIYTTNAIESLNRSLRKVLKTKGAFPNDESIIKLMYLAMQNIAKKWTLPLRDWGSVINQ LSIKFEGRVPL >Mature_410_residues AKKKAPIPDAQKALIDQLIRESGGPQALFDKGGLLDQLKKRFIEQALEAEMDEHLGYPKHAPMVPNSGNARNGHGSKTII VDSDQLEISPPRDRNSTFEPQLIPKRQKRFKGFDEKILAMYARGMSVRDMQAMLLELYEVEVSEALISSVTDTVLDDVRA WQSRPLDRVYPIVYFDCIVVKSRQDGKVSNRAVYLALTVTMEGHKELLGLWLSQNEGAKFWLGVMSELQNRGVQDILIAA VDGLVGFPDAIAAVFPATEVQLCIVHMVRNSTKYVSWKNRKELCADLKTIYGSNTLEEAELSLQAFGKKWDSKYPTVSQL WHRHWENIVPFFAYPKQIRKVIYTTNAIESLNRSLRKVLKTKGAFPNDESIIKLMYLAMQNIAKKWTLPLRDWGSVINQL SIKFEGRVPL
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 46663; Mature: 46531
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKAPIPDAQKALIDQLIRESGGPQALFDKGGLLDQLKKRFIEQALEAEMDEHLGYPK CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC HAPMVPNSGNARNGHGSKTIIVDSDQLEISPPRDRNSTFEPQLIPKRQKRFKGFDEKILA CCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHH MYARGMSVRDMQAMLLELYEVEVSEALISSVTDTVLDDVRAWQSRPLDRVYPIVYFDCIV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEE VKSRQDGKVSNRAVYLALTVTMEGHKELLGLWLSQNEGAKFWLGVMSELQNRGVQDILIA EECCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH AVDGLVGFPDAIAAVFPATEVQLCIVHMVRNSTKYVSWKNRKELCADLKTIYGSNTLEEA HHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCHHHH ELSLQAFGKKWDSKYPTVSQLWHRHWENIVPFFAYPKQIRKVIYTTNAIESLNRSLRKVL HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KTKGAFPNDESIIKLMYLAMQNIAKKWTLPLRDWGSVINQLSIKFEGRVPL HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure AKKKAPIPDAQKALIDQLIRESGGPQALFDKGGLLDQLKKRFIEQALEAEMDEHLGYPK CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC HAPMVPNSGNARNGHGSKTIIVDSDQLEISPPRDRNSTFEPQLIPKRQKRFKGFDEKILA CCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHH MYARGMSVRDMQAMLLELYEVEVSEALISSVTDTVLDDVRAWQSRPLDRVYPIVYFDCIV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEE VKSRQDGKVSNRAVYLALTVTMEGHKELLGLWLSQNEGAKFWLGVMSELQNRGVQDILIA EECCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH AVDGLVGFPDAIAAVFPATEVQLCIVHMVRNSTKYVSWKNRKELCADLKTIYGSNTLEEA HHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCHHHH ELSLQAFGKKWDSKYPTVSQLWHRHWENIVPFFAYPKQIRKVIYTTNAIESLNRSLRKVL HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KTKGAFPNDESIIKLMYLAMQNIAKKWTLPLRDWGSVINQLSIKFEGRVPL HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]