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The map label for this gene is yqjC [H]

Identifier: 119356984

GI number: 119356984

Start: 1316496

End: 1316903

Strand: Reverse

Name: yqjC [H]

Synonym: Cpha266_1167

Alternate gene names: 119356984

Gene position: 1316903-1316496 (Counterclockwise)

Preceding gene: 119356985

Following gene: 119356983

Centisome position: 42.02

GC content: 44.85

Gene sequence:

>408_bases
ATGATCAAAAAAATTGATCACATTGCCATAGCGGTTGAAAATCTTGAACGGGCAATTGAAACATTCAAAAGTGTTCTCGG
ATGCGCTTCGGAAACAATTATTATTGAAGAGGTCGCATCTGAAAACGTTCGGGTTGCCTTGATACCATTGGGGGAATCAC
GGATTGAACTCCTGCAACCTCTCGGAGATGATAATGCCATTGCGCGATTCCTTGCAAAAAACGGGGAGGGCATGCATCAT
ATTGCTTTGGAAACCGATGATATCAGTCATGAAACCGAAAGACTTGAATCTTCCGGCCTGAAACCACTCGGTTCGCAAAA
AGAAGGCGCAGGTGGAAAACAGATTATTTTTCTCCACCCTAAACAGACCAACCGGGTGCTGCTGGAAATCACACAAGAGC
CCCATTGA

Upstream 100 bases:

>100_bases
AGTATGTCATGCCGGCAACCATTGACGACCCGGCAATTCTGGATGAGATAAAAATCGCACTTCAAACCATCGGATACGCA
AAACAAAAAAAACAGAATCG

Downstream 100 bases:

>100_bases
CAAGCAGGAACAATAAGTAATCCATTTTTCTGTGGAACATTTTTATCTGCCTTTTGAAAAACGGGAAGGGTTCAGTTATT
CGCATGAAGGAATTGAACAG

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MIKKIDHIAIAVENLERAIETFKSVLGCASETIIIEEVASENVRVALIPLGESRIELLQPLGDDNAIARFLAKNGEGMHH
IALETDDISHETERLESSGLKPLGSQKEGAGGKQIIFLHPKQTNRVLLEITQEPH

Sequences:

>Translated_135_residues
MIKKIDHIAIAVENLERAIETFKSVLGCASETIIIEEVASENVRVALIPLGESRIELLQPLGDDNAIARFLAKNGEGMHH
IALETDDISHETERLESSGLKPLGSQKEGAGGKQIIFLHPKQTNRVLLEITQEPH
>Mature_135_residues
MIKKIDHIAIAVENLERAIETFKSVLGCASETIIIEEVASENVRVALIPLGESRIELLQPLGDDNAIARFLAKNGEGMHH
IALETDDISHETERLESSGLKPLGSQKEGAGGKQIIFLHPKQTNRVLLEITQEPH

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=132, Percent_Identity=42.4242424242424, Blast_Score=97, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17506387, Length=135, Percent_Identity=37.7777777777778, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14836; Mature: 14836

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKIDHIAIAVENLERAIETFKSVLGCASETIIIEEVASENVRVALIPLGESRIELLQP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHC
LGDDNAIARFLAKNGEGMHHIALETDDISHETERLESSGLKPLGSQKEGAGGKQIIFLHP
CCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC
KQTNRVLLEITQEPH
CCCCEEEEEEECCCC
>Mature Secondary Structure
MIKKIDHIAIAVENLERAIETFKSVLGCASETIIIEEVASENVRVALIPLGESRIELLQP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHC
LGDDNAIARFLAKNGEGMHHIALETDDISHETERLESSGLKPLGSQKEGAGGKQIIFLHP
CCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC
KQTNRVLLEITQEPH
CCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]