| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356963
Identifier: 119356963
GI number: 119356963
Start: 1294393
End: 1294629
Strand: Reverse
Name: 119356963
Synonym: Cpha266_1146
Alternate gene names: NA
Gene position: 1294629-1294393 (Counterclockwise)
Preceding gene: 119356964
Following gene: 119356933
Centisome position: 41.31
GC content: 46.84
Gene sequence:
>237_bases ATGCAACGTAAAATTGAGGATATTACCGCCGAATTAATCAGACTTCCAAAGCAGGATCGTCTGGAGATTGTAAGATTTCT CCTTTTTCTCGACAACCGCCCGTCAGATGCCGATGATGCCGAGTCTGCCTGGGAAAAGGAAATTGCCGACAGGGTTCTTG CTGTGAAGGACGGAACGGCTATTGGTATTGACTATGATGAGGCGATGAGGAAAATCGATGAACGCTTTGCGTCATGA
Upstream 100 bases:
>100_bases GATTTGCAGGACTGGATGCGGAGAATATCTCTTTTCCGTAGTATCGGTGTTAAGATTGAATGCAGAACAGACGGACTGAT CTTAAAGTGGAGATGGATAA
Downstream 100 bases:
>100_bases AGAAGCATCAGGATGCTGCTGCAGATAACGCTATGTACCCTTCAATAACAAGGGTGAAGGCGTAAAATGATTTACAGGAT ACGCCCTGCATGCCGCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MQRKIEDITAELIRLPKQDRLEIVRFLLFLDNRPSDADDAESAWEKEIADRVLAVKDGTAIGIDYDEAMRKIDERFAS
Sequences:
>Translated_78_residues MQRKIEDITAELIRLPKQDRLEIVRFLLFLDNRPSDADDAESAWEKEIADRVLAVKDGTAIGIDYDEAMRKIDERFAS >Mature_78_residues MQRKIEDITAELIRLPKQDRLEIVRFLLFLDNRPSDADDAESAWEKEIADRVLAVKDGTAIGIDYDEAMRKIDERFAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9037; Mature: 9037
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKIEDITAELIRLPKQDRLEIVRFLLFLDNRPSDADDAESAWEKEIADRVLAVKDGTA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE IGIDYDEAMRKIDERFAS ECCCHHHHHHHHHHHHCC >Mature Secondary Structure MQRKIEDITAELIRLPKQDRLEIVRFLLFLDNRPSDADDAESAWEKEIADRVLAVKDGTA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE IGIDYDEAMRKIDERFAS ECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA