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The map label for this gene is cfa [H]

Identifier: 119356896

GI number: 119356896

Start: 1216871

End: 1218034

Strand: Reverse

Name: cfa [H]

Synonym: Cpha266_1075

Alternate gene names: 119356896

Gene position: 1218034-1216871 (Counterclockwise)

Preceding gene: 119356897

Following gene: 119356893

Centisome position: 38.87

GC content: 47.59

Gene sequence:

>1164_bases
ATGGAATATCCATTGAACTCCATTCAGACACAGCATCGCACAGCAATGCTTGACAGCTTTTTCAAAAAGCAGCTCGAACT
CATTTTCAGCAACGCAGATATCCATATCAACGGCAATAGACCCTGGGATATTCGTGTTCATGACAGCCGTTTTTTCAAGC
GGGTAATCACACAGGGAAGTCTGGGACTTGGCGAGTCATACATGGAAGGATGGTGGAACTGTGACGACCTTGAGGAGTTC
TTTTTTCGTCTGCTCTTATCAGGATGCGATGAAAAAGTCGTTACCCCCGAGTGGATTATCGGTAAATTGATCGGCAAAAC
ATGCAATCTCCAGCGACCGTCAAGAGCCTTTATCGTCGGAGAACATCATTACAATACAGGAAACGATCTGTTTGAATGCA
TGCTTGACAAACGAATGATTTACAGTTGCGGCTACTGGAAAGATGCAAATACCCTTGATGAAGCTCAAGAGAAGAAACTC
CGGCTGGTCTTTGATAAACTTGGTCTTAAGGAGGGGATGAAGGTTCTCGACATCGGATGCGGCTGGGGGGGAGCGGCCCG
ATTCGCTGCTGAACACTATAACGTTTCTGTAACGGCAATAACGATATCTTCCGAACAGGCCAGAATAGCCATAGACCAAT
GCGCAGGTCTGCCTGTCAGTATCGAACTCTGCGACTACCGTACACTGCAAGGGATGTTTGACAGAATATACTCGATTGGC
ATGTTCGAGCATGTCGGGCACAAAAACTATCGCACCTATTTCGAGCTGATCAGCCGCTGTCTTAAACCCGACGGGTTATC
ACTCCTGCACACGATAGGCGGAAACACGACCACCACCAATGGTGATCCCTGGAGCTGCAAATACATCTTTCCGAACTCCA
TGCTTCCAAGTGCAAACCAGATCACCGAAAACTACGAAGGTCTTCTGAAACTCGAAGACTGGCACGTCTTCAGCTACGAC
TACTCTCTGACGCTGAAGGCCTGGCATGAAAATGTCGAAAAACACTGGAAGAACCTGCAATCCCGCTACAGCGAAACGTT
TCACCGTATGTGGCAATACTACCTTCTCAGCTTTTCAGGAGCTTTCAGATCACGATCTATCGAGCTCTGGCAGATTCTGC
TTTCAAAACAGGGTATTATGGGAGAATACCGCGTTCAGCGCTGA

Upstream 100 bases:

>100_bases
GGCGCATTTGATGTTCCCAGATAAACTCTAATCGTTGCTCAGGATTCAATATAATCCCTCTTGTTTCTGTAGTAGTGACA
ATCGATAATGACCATCAGCC

Downstream 100 bases:

>100_bases
ACGACAATATCATAAAGCACCCGGGATCCTCAATTAATTATGATACGCGGTTCGAGCTGAAGCTTCGCTCCTAAACACAA
TTTGAAAAGCGCGAACGGAG

Product: cyclopropane fatty acyl phospholipid synthase

Products: NA

Alternate protein names: CFA synthase; Cyclopropane fatty acid synthase [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MEYPLNSIQTQHRTAMLDSFFKKQLELIFSNADIHINGNRPWDIRVHDSRFFKRVITQGSLGLGESYMEGWWNCDDLEEF
FFRLLLSGCDEKVVTPEWIIGKLIGKTCNLQRPSRAFIVGEHHYNTGNDLFECMLDKRMIYSCGYWKDANTLDEAQEKKL
RLVFDKLGLKEGMKVLDIGCGWGGAARFAAEHYNVSVTAITISSEQARIAIDQCAGLPVSIELCDYRTLQGMFDRIYSIG
MFEHVGHKNYRTYFELISRCLKPDGLSLLHTIGGNTTTTNGDPWSCKYIFPNSMLPSANQITENYEGLLKLEDWHVFSYD
YSLTLKAWHENVEKHWKNLQSRYSETFHRMWQYYLLSFSGAFRSRSIELWQILLSKQGIMGEYRVQR

Sequences:

>Translated_387_residues
MEYPLNSIQTQHRTAMLDSFFKKQLELIFSNADIHINGNRPWDIRVHDSRFFKRVITQGSLGLGESYMEGWWNCDDLEEF
FFRLLLSGCDEKVVTPEWIIGKLIGKTCNLQRPSRAFIVGEHHYNTGNDLFECMLDKRMIYSCGYWKDANTLDEAQEKKL
RLVFDKLGLKEGMKVLDIGCGWGGAARFAAEHYNVSVTAITISSEQARIAIDQCAGLPVSIELCDYRTLQGMFDRIYSIG
MFEHVGHKNYRTYFELISRCLKPDGLSLLHTIGGNTTTTNGDPWSCKYIFPNSMLPSANQITENYEGLLKLEDWHVFSYD
YSLTLKAWHENVEKHWKNLQSRYSETFHRMWQYYLLSFSGAFRSRSIELWQILLSKQGIMGEYRVQR
>Mature_387_residues
MEYPLNSIQTQHRTAMLDSFFKKQLELIFSNADIHINGNRPWDIRVHDSRFFKRVITQGSLGLGESYMEGWWNCDDLEEF
FFRLLLSGCDEKVVTPEWIIGKLIGKTCNLQRPSRAFIVGEHHYNTGNDLFECMLDKRMIYSCGYWKDANTLDEAQEKKL
RLVFDKLGLKEGMKVLDIGCGWGGAARFAAEHYNVSVTAITISSEQARIAIDQCAGLPVSIELCDYRTLQGMFDRIYSIG
MFEHVGHKNYRTYFELISRCLKPDGLSLLHTIGGNTTTTNGDPWSCKYIFPNSMLPSANQITENYEGLLKLEDWHVFSYD
YSLTLKAWHENVEKHWKNLQSRYSETFHRMWQYYLLSFSGAFRSRSIELWQILLSKQGIMGEYRVQR

Specific function: Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge [H]

COG id: COG2230

COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CFA/CMAS family [H]

Homologues:

Organism=Escherichia coli, GI1787951, Length=371, Percent_Identity=51.7520215633423, Blast_Score=385, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI133904226, Length=386, Percent_Identity=28.7564766839378, Blast_Score=134, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003333 [H]

Pfam domain/function: PF02353 CMAS [H]

EC number: =2.1.1.79 [H]

Molecular weight: Translated: 45035; Mature: 45035

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYPLNSIQTQHRTAMLDSFFKKQLELIFSNADIHINGNRPWDIRVHDSRFFKRVITQGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCEEEEECHHHHHHHHHHCCC
LGLGESYMEGWWNCDDLEEFFFRLLLSGCDEKVVTPEWIIGKLIGKTCNLQRPSRAFIVG
CCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEE
EHHYNTGNDLFECMLDKRMIYSCGYWKDANTLDEAQEKKLRLVFDKLGLKEGMKVLDIGC
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCEEEEECC
GWGGAARFAAEHYNVSVTAITISSEQARIAIDQCAGLPVSIELCDYRTLQGMFDRIYSIG
CCCHHHHHHHHHCEEEEEEEEEECCCCEEEHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
MFEHVGHKNYRTYFELISRCLKPDGLSLLHTIGGNTTTTNGDPWSCKYIFPNSMLPSANQ
HHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHH
ITENYEGLLKLEDWHVFSYDYSLTLKAWHENVEKHWKNLQSRYSETFHRMWQYYLLSFSG
HHHCCCCEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFRSRSIELWQILLSKQGIMGEYRVQR
HHHCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEYPLNSIQTQHRTAMLDSFFKKQLELIFSNADIHINGNRPWDIRVHDSRFFKRVITQGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCEEEEECHHHHHHHHHHCCC
LGLGESYMEGWWNCDDLEEFFFRLLLSGCDEKVVTPEWIIGKLIGKTCNLQRPSRAFIVG
CCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEE
EHHYNTGNDLFECMLDKRMIYSCGYWKDANTLDEAQEKKLRLVFDKLGLKEGMKVLDIGC
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCEEEEECC
GWGGAARFAAEHYNVSVTAITISSEQARIAIDQCAGLPVSIELCDYRTLQGMFDRIYSIG
CCCHHHHHHHHHCEEEEEEEEEECCCCEEEHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
MFEHVGHKNYRTYFELISRCLKPDGLSLLHTIGGNTTTTNGDPWSCKYIFPNSMLPSANQ
HHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHH
ITENYEGLLKLEDWHVFSYDYSLTLKAWHENVEKHWKNLQSRYSETFHRMWQYYLLSFSG
HHHCCCCEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFRSRSIELWQILLSKQGIMGEYRVQR
HHHCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]