| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356854
Identifier: 119356854
GI number: 119356854
Start: 1165302
End: 1165793
Strand: Reverse
Name: 119356854
Synonym: Cpha266_1027
Alternate gene names: NA
Gene position: 1165793-1165302 (Counterclockwise)
Preceding gene: 119356856
Following gene: 119356853
Centisome position: 37.2
GC content: 51.42
Gene sequence:
>492_bases ATGAAAAAAACATTCGCAACAATCCTGGTCGCCGCAGCGGTATTGGGATTTGGAAGCACATCGTTTGCCGGTAACGGAGG AAACATTAATCACGGAACACCTCTGGCTGATGACATTCTTGTCCTCCTCAATGATCAGTCGTCAACAACCACGAATACAC AGAATAACCCAAGCATTACTGTCGGTGACATTTCTGCGGCTATTGCCAGCGCAACGGCACCTGCGTTTCTGACTCAGGGC GATATCGCTTACGCTGTGGCCTCTGCAACACAGGAATCGTCATTTCCTGCACTTGAGTGGGTCGTAACACCGCTTGTCGC CGCTGGTGTAGGCGTAGGTGATGCGAATGGATCTGATGGTATGACCGTTGGCAATATTAATGTCTCCGGAGCAGTCGGAT CCGGTGTTGGCGTAAACCTTGGTGGCGCCGTATTTGAATCGATCAACTCTGCCACCGCAATTGCTATCAACGGCTCACTG GGCGGCAACTGA
Upstream 100 bases:
>100_bases AGAAAGAGTTGCTGTTGAGCAGGATTTCCGACAGGACTCTTTAGGCGTGTTGTTCTGATGAAAAAAAACCTCTCTTAACA AAAACAAAAGGAGTCGCATC
Downstream 100 bases:
>100_bases TAACAATCAGGTACTGCCCGGCACAGCATAGTCCAGGCTTTCTCCCCGGTCGAAAAAAAACATGTTCGACCGGGGAGCGG GCAAACAAGATAAATACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLADDILVLLNDQSSTTTNTQNNPSITVGDISAAIASATAPAFLTQG DIAYAVASATQESSFPALEWVVTPLVAAGVGVGDANGSDGMTVGNINVSGAVGSGVGVNLGGAVFESINSATAIAINGSL GGN
Sequences:
>Translated_163_residues MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLADDILVLLNDQSSTTTNTQNNPSITVGDISAAIASATAPAFLTQG DIAYAVASATQESSFPALEWVVTPLVAAGVGVGDANGSDGMTVGNINVSGAVGSGVGVNLGGAVFESINSATAIAINGSL GGN >Mature_163_residues MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLADDILVLLNDQSSTTTNTQNNPSITVGDISAAIASATAPAFLTQG DIAYAVASATQESSFPALEWVVTPLVAAGVGVGDANGSDGMTVGNINVSGAVGSGVGVNLGGAVFESINSATAIAINGSL GGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15770; Mature: 15770
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLADDILVLLNDQSSTTTNTQNNPSIT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEE VGDISAAIASATAPAFLTQGDIAYAVASATQESSFPALEWVVTPLVAAGVGVGDANGSDG ECHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC MTVGNINVSGAVGSGVGVNLGGAVFESINSATAIAINGSLGGN EEEECEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCC >Mature Secondary Structure MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLADDILVLLNDQSSTTTNTQNNPSIT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEE VGDISAAIASATAPAFLTQGDIAYAVASATQESSFPALEWVVTPLVAAGVGVGDANGSDG ECHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC MTVGNINVSGAVGSGVGVNLGGAVFESINSATAIAINGSLGGN EEEECEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA