Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356763

Identifier: 119356763

GI number: 119356763

Start: 1076649

End: 1077113

Strand: Direct

Name: 119356763

Synonym: Cpha266_0935

Alternate gene names: NA

Gene position: 1076649-1077113 (Clockwise)

Preceding gene: 119356762

Following gene: 119356764

Centisome position: 34.35

GC content: 40.0

Gene sequence:

>465_bases
TTGACCAAGATGGAGTTAATTCCTATATTTCGACAAGAAAACCCAACATTATACGCAGTCAAATATAATGGGGAATCTGA
AGACGAATACCACCGGCTGTTCGATCTATGGAGTGATATTGAGTACCTTGAAACGTTTTTTCAGGATAATTGGGAAGATC
TTTTAAAAGGTTTCTACCGTTACCCATCTGTCGAAGATGCAATAGAAAAAACCATAAACGACGCCGAGTCTCTTGAGGAT
TATTTACAGAGTCTTGCAAAATGTTCACTCATTGATCGTTTCAGTTTGCAGACTCTTTTTCAACCACTTAACGCTCGTGA
AACACATTTGTCGAGTATGCAGAAAAGTAAGGCGAGATACAAAAAGAGCCCTTGGCTTCGTTTGTATGCAATTCGCATTG
CTTCTGACCTGGGCTCTTTGCAGATTATCGTGGAAAAATGTGGGTCAATGGGTAACTTGGCGTAA

Upstream 100 bases:

>100_bases
AAGTACGAATTTGGCCGATGGCACTTCATCGAAGTAGCCAACGACATCCGCGACATCAGGACACAGTTGCTCAATAAAAT
TCAGGAAATAAACTTATAGG

Downstream 100 bases:

>100_bases
TTCTGATTCCTATCCAAAAAAAGCGATTCTCTTTGCTTATGCCCCCTTTGCCAAGTCTTACGAGCCACTACCACCAATTG
TTGGGTCTTCCTCCAAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTKMELIPIFRQENPTLYAVKYNGESEDEYHRLFDLWSDIEYLETFFQDNWEDLLKGFYRYPSVEDAIEKTINDAESLED
YLQSLAKCSLIDRFSLQTLFQPLNARETHLSSMQKSKARYKKSPWLRLYAIRIASDLGSLQIIVEKCGSMGNLA

Sequences:

>Translated_154_residues
MTKMELIPIFRQENPTLYAVKYNGESEDEYHRLFDLWSDIEYLETFFQDNWEDLLKGFYRYPSVEDAIEKTINDAESLED
YLQSLAKCSLIDRFSLQTLFQPLNARETHLSSMQKSKARYKKSPWLRLYAIRIASDLGSLQIIVEKCGSMGNLA
>Mature_153_residues
TKMELIPIFRQENPTLYAVKYNGESEDEYHRLFDLWSDIEYLETFFQDNWEDLLKGFYRYPSVEDAIEKTINDAESLEDY
LQSLAKCSLIDRFSLQTLFQPLNARETHLSSMQKSKARYKKSPWLRLYAIRIASDLGSLQIIVEKCGSMGNLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18081; Mature: 17950

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKMELIPIFRQENPTLYAVKYNGESEDEYHRLFDLWSDIEYLETFFQDNWEDLLKGFYR
CCCCHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
YPSVEDAIEKTINDAESLEDYLQSLAKCSLIDRFSLQTLFQPLNARETHLSSMQKSKARY
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KKSPWLRLYAIRIASDLGSLQIIVEKCGSMGNLA
CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKMELIPIFRQENPTLYAVKYNGESEDEYHRLFDLWSDIEYLETFFQDNWEDLLKGFYR
CCCHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
YPSVEDAIEKTINDAESLEDYLQSLAKCSLIDRFSLQTLFQPLNARETHLSSMQKSKARY
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KKSPWLRLYAIRIASDLGSLQIIVEKCGSMGNLA
CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA