| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356752
Identifier: 119356752
GI number: 119356752
Start: 1052621
End: 1053034
Strand: Direct
Name: 119356752
Synonym: Cpha266_0924
Alternate gene names: NA
Gene position: 1052621-1053034 (Clockwise)
Preceding gene: 119356747
Following gene: 119356753
Centisome position: 33.59
GC content: 46.86
Gene sequence:
>414_bases ATGGGTGAGCGGATAAAAAAAATTTTCAGACAATCAGGAGTTATTCCGGTTATGGATAATCGACTGGTACTGATAACCTC CAGAAAGACGAATCGGTGGACTATTCCCAAGGGATATGTCGAAAAAGGGCTTTCAGCGGCTGAATCCGCAGCAAAGGAGG CCTATGAGGAGGCTGGTCTCATAGGTGTTGTGCATCATGAAGAGGCAGGAGCGTACCGTTACAGCAAATTCGGCAAGCTG TTTTCAGTTCAGGTTTTTCCGCTCTATATCGAAACGCTGCTTGACGACTGGGATGAAATGCATGTCCGACAGCGAAAAAT CGTATCTCCCCTCGAAGCTTTTGATCTTTTGTATCATGACCAGCTCAAGGACGTTATTGCCGGGTATTTCGGCATCAAAC GGAACGGCAGATGA
Upstream 100 bases:
>100_bases ACTCTCTTTCTTGCATGAAAAAAAGAGAAATCGGTTGTATTTTCGGGTGGCTTTTCTTTTAATATGCAGTATGAGTTCGG GAAAACAGGATTGTGGCTTT
Downstream 100 bases:
>100_bases TGAGCGCTTGTCTTTTACTTTCGCGCTCTCTTGGAGGTTCGTAGACAGCAGGGTGGAAAAGTATTATTTTTTTTGGAGGT AATGATTCTTGTGATATATT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX/MutT Family Protein; Nudix/MutT Family Protein; Hydroxylase NUDIX Family Protein
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MGERIKKIFRQSGVIPVMDNRLVLITSRKTNRWTIPKGYVEKGLSAAESAAKEAYEEAGLIGVVHHEEAGAYRYSKFGKL FSVQVFPLYIETLLDDWDEMHVRQRKIVSPLEAFDLLYHDQLKDVIAGYFGIKRNGR
Sequences:
>Translated_137_residues MGERIKKIFRQSGVIPVMDNRLVLITSRKTNRWTIPKGYVEKGLSAAESAAKEAYEEAGLIGVVHHEEAGAYRYSKFGKL FSVQVFPLYIETLLDDWDEMHVRQRKIVSPLEAFDLLYHDQLKDVIAGYFGIKRNGR >Mature_136_residues GERIKKIFRQSGVIPVMDNRLVLITSRKTNRWTIPKGYVEKGLSAAESAAKEAYEEAGLIGVVHHEEAGAYRYSKFGKLF SVQVFPLYIETLLDDWDEMHVRQRKIVSPLEAFDLLYHDQLKDVIAGYFGIKRNGR
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15731; Mature: 15600
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERIKKIFRQSGVIPVMDNRLVLITSRKTNRWTIPKGYVEKGLSAAESAAKEAYEEAGL CCHHHHHHHHHCCCCEEECCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCE IGVVHHEEAGAYRYSKFGKLFSVQVFPLYIETLLDDWDEMHVRQRKIVSPLEAFDLLYHD EEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHH QLKDVIAGYFGIKRNGR HHHHHHHHHHCCCCCCC >Mature Secondary Structure GERIKKIFRQSGVIPVMDNRLVLITSRKTNRWTIPKGYVEKGLSAAESAAKEAYEEAGL CHHHHHHHHHCCCCEEECCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCE IGVVHHEEAGAYRYSKFGKLFSVQVFPLYIETLLDDWDEMHVRQRKIVSPLEAFDLLYHD EEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHH QLKDVIAGYFGIKRNGR HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA