| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yecA [C]
Identifier: 119356742
GI number: 119356742
Start: 1041943
End: 1042539
Strand: Direct
Name: yecA [C]
Synonym: Cpha266_0914
Alternate gene names: 119356742
Gene position: 1041943-1042539 (Clockwise)
Preceding gene: 119356740
Following gene: 119356743
Centisome position: 33.25
GC content: 44.56
Gene sequence:
>597_bases ATGAACCCATCTGATCGTTTACTTACACCCCTTTCCATCGAAGAGCTTGATGAGCTTGAAAGTTTTCTTGTCTCTGAATC GACTCCGGAAAACTGCCTCTCTTCAATTGAAATGCTTGACGGGTATATGACCGCACTTGTTGTCGGTCCTGAAATGCCTT CTGTTGACGTATGGATGTCGAATATCTGGGATCAGGAAACGAGTTCCGAGCCCGTTTTTTCTTCGGAAACAGAAGAAACA GTGATCAAAGAGTCTCTTGTTCGTCATATGAACACCATCGCTTTGCAATTCCAGACCGATCCTGATGAGTATCAGCCGAT ACATGAAAAGTTCAGCTATCCTGATGAGCAGCAAGCAGAGGTTGCTGTTGAAGAGTGGGCAATCGGGTTCACTATGGGAA TGGAGCTGCAATATGATGTATGGGAGCCGTTTTTTGTTGATGAAGAGACCTCCGCACTGATATTGCCGATGTTCATTCTC GGTAAAATAAGTGATGACTACGATGTTCTGTCAGAGGATGAGACCAACCAGTTGATCCGGATGTTGCCTGACATTGTCGT CAAACTGTACTATTACTGGAATGAGAATATCCGGTAA
Upstream 100 bases:
>100_bases TGAAAGAGATGAACATATTTTGGCTGTAATAGCAGAGCGGTTTTTATAAATTAAAAGAAACAGGGAGGCTTTTTTATCAC TTTTCCGGATTCTCTTATTT
Downstream 100 bases:
>100_bases TCGATATCCGATCGAAAGGGTTATTGGATTTTCCAGGGCAAGTCAGCCGTGTTTTCGGTTTTTTTAACAGCTCAACGTTC CCTGATATCGTGAAAACCCC
Product: yecA family protein
Products: NA
Alternate protein names: YgfB And YecA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MNPSDRLLTPLSIEELDELESFLVSESTPENCLSSIEMLDGYMTALVVGPEMPSVDVWMSNIWDQETSSEPVFSSETEET VIKESLVRHMNTIALQFQTDPDEYQPIHEKFSYPDEQQAEVAVEEWAIGFTMGMELQYDVWEPFFVDEETSALILPMFIL GKISDDYDVLSEDETNQLIRMLPDIVVKLYYYWNENIR
Sequences:
>Translated_198_residues MNPSDRLLTPLSIEELDELESFLVSESTPENCLSSIEMLDGYMTALVVGPEMPSVDVWMSNIWDQETSSEPVFSSETEET VIKESLVRHMNTIALQFQTDPDEYQPIHEKFSYPDEQQAEVAVEEWAIGFTMGMELQYDVWEPFFVDEETSALILPMFIL GKISDDYDVLSEDETNQLIRMLPDIVVKLYYYWNENIR >Mature_198_residues MNPSDRLLTPLSIEELDELESFLVSESTPENCLSSIEMLDGYMTALVVGPEMPSVDVWMSNIWDQETSSEPVFSSETEET VIKESLVRHMNTIALQFQTDPDEYQPIHEKFSYPDEQQAEVAVEEWAIGFTMGMELQYDVWEPFFVDEETSALILPMFIL GKISDDYDVLSEDETNQLIRMLPDIVVKLYYYWNENIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22960; Mature: 22960
Theoretical pI: Translated: 3.55; Mature: 3.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSDRLLTPLSIEELDELESFLVSESTPENCLSSIEMLDGYMTALVVGPEMPSVDVWMS CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH NIWDQETSSEPVFSSETEETVIKESLVRHMNTIALQFQTDPDEYQPIHEKFSYPDEQQAE HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHCCHHHHCCCCCHHHHH VAVEEWAIGFTMGMELQYDVWEPFFVDEETSALILPMFILGKISDDYDVLSEDETNQLIR HHHHHHHHHEEECCEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHHH MLPDIVVKLYYYWNENIR HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNPSDRLLTPLSIEELDELESFLVSESTPENCLSSIEMLDGYMTALVVGPEMPSVDVWMS CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH NIWDQETSSEPVFSSETEETVIKESLVRHMNTIALQFQTDPDEYQPIHEKFSYPDEQQAE HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHCCHHHHCCCCCHHHHH VAVEEWAIGFTMGMELQYDVWEPFFVDEETSALILPMFILGKISDDYDVLSEDETNQLIR HHHHHHHHHEEECCEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHHH MLPDIVVKLYYYWNENIR HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA