| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is pkn1 [H]
Identifier: 119356728
GI number: 119356728
Start: 1028207
End: 1030687
Strand: Direct
Name: pkn1 [H]
Synonym: Cpha266_0900
Alternate gene names: 119356728
Gene position: 1028207-1030687 (Clockwise)
Preceding gene: 119356727
Following gene: 119356729
Centisome position: 32.81
GC content: 50.42
Gene sequence:
>2481_bases ATGATGACCGAACCCCTGGCAACATATATTTCAGCCAATCACCAGTATCCGTTCGATGAGTTGTTTGAACTCCTTCGGGA ACAGGGCTTCAGTTTTGGAGTTGACACCTGTGAAACAGCACATTATGTGATCATGAAAGCCATTGAGTCGGGTGACCTTG AACGGCTCGATATGTGGTTATGTCCGGTGCTGGCCCATTCCGCAGAACAGCAGGCGACATTTTTTGAACTCTATAAACGG CTTTTTATTCCCTTTATCGAAAAACAGTCAACGGCTATTGACAAAAAAGAGAAGCTGCCGGTTTCATCCGGAACAGGCGA TACGGCAACAGTACGAAAACAGGAGCGGGAAACAGATAAAAAGGGCAGGGAGGAGAGTGAGAAAATCGTGGCCTCTCTGA AAGCCCGAAGCGGCGGTTCATATACGATCGACCGCTTTGTACAATCAACGGAGATTGAGAGCGACCCGGTGCTGCTCAGG GTGGTGCGTCAACTTCGCTATACGGAACAGTCCGGCCGCTACTCTTTTGATATTGAAAAAACAATTCATAAAACCATTCA TGACGGCGGCATGGCCAGGCCGGTTTTTACCCCGTCCCGTCTCCATGTCGAGTATCTGATGCTCATTGACCGCCACAATT CCCGTGACCCTCAGGCACATCTCCACAACAACCTCTATGAGACACTGAAAGCAAACAATATTTTTGTTGAACGCTTCTGG TTCGACAATTCCCCACTCCTTTGCCGCAATCATCGTCATCCCGGTGGCATTGCGCTGTCGGAAATTCTCGGCATTCATGA ACATGCCGCTCTTCTTCTCTTTACCGACGGCTTGCAATGTATCGATACCGGGCACGAAAGCCTGTTTGCTTGGACAGGGA TCTTCAAACATTGGCAGCACCGATATTTTTTCAGTTCCGTGCCCCCGGTACTCTGGGGAGAGCGCGAGCGATTGCTGCAA GGAGTGTTTCCGTTTGTTTTGCCACTTTCAGTTGAAGGAATGCAGGTTATGGCGGCCGACCTTTCGCAGATGGCCAGTGC CGATTGCGATTGGCTGCGTTACTGGCCTGATAAAGCCGATTATGCGCGGGTTCCGATACAAACCGGGGGCAGAAAACTTG ATTATATCGGGTTGTTTTTCACGACCGGGATAAAACGCTGGATTGCTGCCTGTGCGGTCTATCCGGAACTTGACTGGAAT CTGACCCTCGCATTGGGCAAAATGTTTTCAACGGAAAAAAACGTTTTGCCTTCATACAACAATATCAGCCAGTTGCTCCG TCTTGGATGGTTTATAAAGGGGAACATTCCCGACGTTTTTCGTCTTGCTCTCCTGAAAGAGTGGCTGAGCCATGAAGAGC GTGTCCGTGTGTATCAGTTTCTTTACGACCAGCTCAGCCAGAACCTCCCTCTGGAAAGTGAACCTGATTACAGTCGCCGT ACCCTGCAACTTGCCGTTTACGACCTGCTTGCCCAGACAAACAAAGAGCTGTTCGAAGAAAAGGCAAAACAACTGGCGAG TATCCACGAACCGAATAGCCGCCTGCCCGATATGGTGAGCATTCATCTGATCAATGAGCATGAATACAGTCCGGTATTTT TTGAAATCCCTGACGCTGTTTTAAAACGTATGGGCCTTGATCCTGCGCAAACCAGAAAGGCAGAAAAGGTGCCTCTGAAC TTTGTTCGCATACCTGAAGGCGAATTTACCATGGGAAGTCCGGCAAGTGAAATTGACAGATCTGGTGATGAGACTCAGCA CCAGGTGAAGGTGAGTGACTTTTATCTGTGTAAATATGCGGTTACTCTTGCCGGGTTCAAGGAATTTATCGAAGCATCGG GCTATCGCACTGATGCTGAAAAAGGGGATGGCAGTTATGTGTGGGATGGTAAAAGCTGGGAGAAGAGAGCGGGAATAAAC TGGCGCTTTGGCATATCGGGCGGTGTGCGACCTCAAAGTGAGGAGAACCACCCTGTTGTGCATGTGAGCTGGAATGACGC TGTGGCCTATTGCAAGTGGATATCGGAAAAAACAGGACAGCAGTTTCGATTGCCAACGGAAGCTGAGTGGGAATATGCGT GTCGAGCAGGAACAACCACACCGTTCCATACTGGCGATAACCTGACAACCGGGGAGGCGAACTATAACGGTAATTATCCG TATAACAAAAATCCGAAAGGGGAGTACCGGGAGAACACGGTTCCGGTTGACAGTCTGGCGCCGAACGCGTGGGGGTTATA CCATATGCATGGCAATGTGTGGGAGTGGTGTGGCGACAGGTATGGGGATAAGTATTATGATGAATGCAAAGCCAAAGGGG TTGTTGAAAATCCGGTTGGTCCGGAAACCGGTTCGATCCGTGTGCTTCGTGGTGGTAGCTGGGGCAACTATGCGGGGTAC TGTCGGTCGGCTAATCGCAACAGCGACACCCCCGGCGACCGCGGCAGCGACGCCGGCTTCCGCCTGGCCTTCGTCCCGTA G
Upstream 100 bases:
>100_bases AAAATGCGAAAACCCTTTTGAGCGGAATCTCTGTATTGGCCAAGGAAGATAGCGACTGGAAAACGGTTACCGAGGCCATA ACAGGTCATAACATCAAGGG
Downstream 100 bases:
>100_bases TCAGTTGGCAGCTCATGCCGACCTTTACTTTGAGCAGGAGGGGGTGCCAACATTGAGGTGAGCGGCAGCAAGGGACGCAG CGCCGCACGCCTCAATGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 826; Mature: 826
Protein sequence:
>826_residues MMTEPLATYISANHQYPFDELFELLREQGFSFGVDTCETAHYVIMKAIESGDLERLDMWLCPVLAHSAEQQATFFELYKR LFIPFIEKQSTAIDKKEKLPVSSGTGDTATVRKQERETDKKGREESEKIVASLKARSGGSYTIDRFVQSTEIESDPVLLR VVRQLRYTEQSGRYSFDIEKTIHKTIHDGGMARPVFTPSRLHVEYLMLIDRHNSRDPQAHLHNNLYETLKANNIFVERFW FDNSPLLCRNHRHPGGIALSEILGIHEHAALLLFTDGLQCIDTGHESLFAWTGIFKHWQHRYFFSSVPPVLWGERERLLQ GVFPFVLPLSVEGMQVMAADLSQMASADCDWLRYWPDKADYARVPIQTGGRKLDYIGLFFTTGIKRWIAACAVYPELDWN LTLALGKMFSTEKNVLPSYNNISQLLRLGWFIKGNIPDVFRLALLKEWLSHEERVRVYQFLYDQLSQNLPLESEPDYSRR TLQLAVYDLLAQTNKELFEEKAKQLASIHEPNSRLPDMVSIHLINEHEYSPVFFEIPDAVLKRMGLDPAQTRKAEKVPLN FVRIPEGEFTMGSPASEIDRSGDETQHQVKVSDFYLCKYAVTLAGFKEFIEASGYRTDAEKGDGSYVWDGKSWEKRAGIN WRFGISGGVRPQSEENHPVVHVSWNDAVAYCKWISEKTGQQFRLPTEAEWEYACRAGTTTPFHTGDNLTTGEANYNGNYP YNKNPKGEYRENTVPVDSLAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAKGVVENPVGPETGSIRVLRGGSWGNYAGY CRSANRNSDTPGDRGSDAGFRLAFVP
Sequences:
>Translated_826_residues MMTEPLATYISANHQYPFDELFELLREQGFSFGVDTCETAHYVIMKAIESGDLERLDMWLCPVLAHSAEQQATFFELYKR LFIPFIEKQSTAIDKKEKLPVSSGTGDTATVRKQERETDKKGREESEKIVASLKARSGGSYTIDRFVQSTEIESDPVLLR VVRQLRYTEQSGRYSFDIEKTIHKTIHDGGMARPVFTPSRLHVEYLMLIDRHNSRDPQAHLHNNLYETLKANNIFVERFW FDNSPLLCRNHRHPGGIALSEILGIHEHAALLLFTDGLQCIDTGHESLFAWTGIFKHWQHRYFFSSVPPVLWGERERLLQ GVFPFVLPLSVEGMQVMAADLSQMASADCDWLRYWPDKADYARVPIQTGGRKLDYIGLFFTTGIKRWIAACAVYPELDWN LTLALGKMFSTEKNVLPSYNNISQLLRLGWFIKGNIPDVFRLALLKEWLSHEERVRVYQFLYDQLSQNLPLESEPDYSRR TLQLAVYDLLAQTNKELFEEKAKQLASIHEPNSRLPDMVSIHLINEHEYSPVFFEIPDAVLKRMGLDPAQTRKAEKVPLN FVRIPEGEFTMGSPASEIDRSGDETQHQVKVSDFYLCKYAVTLAGFKEFIEASGYRTDAEKGDGSYVWDGKSWEKRAGIN WRFGISGGVRPQSEENHPVVHVSWNDAVAYCKWISEKTGQQFRLPTEAEWEYACRAGTTTPFHTGDNLTTGEANYNGNYP YNKNPKGEYRENTVPVDSLAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAKGVVENPVGPETGSIRVLRGGSWGNYAGY CRSANRNSDTPGDRGSDAGFRLAFVP >Mature_826_residues MMTEPLATYISANHQYPFDELFELLREQGFSFGVDTCETAHYVIMKAIESGDLERLDMWLCPVLAHSAEQQATFFELYKR LFIPFIEKQSTAIDKKEKLPVSSGTGDTATVRKQERETDKKGREESEKIVASLKARSGGSYTIDRFVQSTEIESDPVLLR VVRQLRYTEQSGRYSFDIEKTIHKTIHDGGMARPVFTPSRLHVEYLMLIDRHNSRDPQAHLHNNLYETLKANNIFVERFW FDNSPLLCRNHRHPGGIALSEILGIHEHAALLLFTDGLQCIDTGHESLFAWTGIFKHWQHRYFFSSVPPVLWGERERLLQ GVFPFVLPLSVEGMQVMAADLSQMASADCDWLRYWPDKADYARVPIQTGGRKLDYIGLFFTTGIKRWIAACAVYPELDWN LTLALGKMFSTEKNVLPSYNNISQLLRLGWFIKGNIPDVFRLALLKEWLSHEERVRVYQFLYDQLSQNLPLESEPDYSRR TLQLAVYDLLAQTNKELFEEKAKQLASIHEPNSRLPDMVSIHLINEHEYSPVFFEIPDAVLKRMGLDPAQTRKAEKVPLN FVRIPEGEFTMGSPASEIDRSGDETQHQVKVSDFYLCKYAVTLAGFKEFIEASGYRTDAEKGDGSYVWDGKSWEKRAGIN WRFGISGGVRPQSEENHPVVHVSWNDAVAYCKWISEKTGQQFRLPTEAEWEYACRAGTTTPFHTGDNLTTGEANYNGNYP YNKNPKGEYRENTVPVDSLAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAKGVVENPVGPETGSIRVLRGGSWGNYAGY CRSANRNSDTPGDRGSDAGFRLAFVP
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI38202250, Length=288, Percent_Identity=35.7638888888889, Blast_Score=157, Evalue=5e-38, Organism=Homo sapiens, GI257470975, Length=271, Percent_Identity=36.1623616236162, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI257470977, Length=288, Percent_Identity=32.9861111111111, Blast_Score=134, Evalue=4e-31, Organism=Homo sapiens, GI194248087, Length=278, Percent_Identity=32.7338129496403, Blast_Score=103, Evalue=9e-22, Organism=Homo sapiens, GI194248088, Length=293, Percent_Identity=30.3754266211604, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI226437577, Length=190, Percent_Identity=35.2631578947368, Blast_Score=85, Evalue=4e-16, Organism=Homo sapiens, GI194248090, Length=157, Percent_Identity=32.484076433121, Blast_Score=74, Evalue=6e-13, Organism=Drosophila melanogaster, GI20130397, Length=292, Percent_Identity=33.9041095890411, Blast_Score=127, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 94411; Mature: 94411
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00616 HIS_ACID_PHOSPHAT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTEPLATYISANHQYPFDELFELLREQGFSFGVDTCETAHYVIMKAIESGDLERLDMWL CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH CPVLAHSAEQQATFFELYKRLFIPFIEKQSTAIDKKEKLPVSSGTGDTATVRKQERETDK HHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHH KGREESEKIVASLKARSGGSYTIDRFVQSTEIESDPVLLRVVRQLRYTEQSGRYSFDIEK CCHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHH TIHKTIHDGGMARPVFTPSRLHVEYLMLIDRHNSRDPQAHLHNNLYETLKANNIFVERFW HHHHHHHCCCCCCCCCCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEE FDNSPLLCRNHRHPGGIALSEILGIHEHAALLLFTDGLQCIDTGHESLFAWTGIFKHWQH ECCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHH RYFFSSVPPVLWGERERLLQGVFPFVLPLSVEGMQVMAADLSQMASADCDWLRYWPDKAD HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC YARVPIQTGGRKLDYIGLFFTTGIKRWIAACAVYPELDWNLTLALGKMFSTEKNVLPSYN EEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCHH NISQLLRLGWFIKGNIPDVFRLALLKEWLSHEERVRVYQFLYDQLSQNLPLESEPDYSRR HHHHHHHHCCEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH TLQLAVYDLLAQTNKELFEEKAKQLASIHEPNSRLPDMVSIHLINEHEYSPVFFEIPDAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEECCHHH LKRMGLDPAQTRKAEKVPLNFVRIPEGEFTMGSPASEIDRSGDETQHQVKVSDFYLCKYA HHHCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCHHEEEEHHHHHHHHH VTLAGFKEFIEASGYRTDAEKGDGSYVWDGKSWEKRAGINWRFGISGGVRPQSEENHPVV HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHCCCCEEEECCCCCCCCCCCCCCEE HVSWNDAVAYCKWISEKTGQQFRLPTEAEWEYACRAGTTTPFHTGDNLTTGEANYNGNYP EEECCCHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YNKNPKGEYRENTVPVDSLAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAKGVVENPVG CCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHCCCCCCCCCC PETGSIRVLRGGSWGNYAGYCRSANRNSDTPGDRGSDAGFRLAFVP CCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MMTEPLATYISANHQYPFDELFELLREQGFSFGVDTCETAHYVIMKAIESGDLERLDMWL CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH CPVLAHSAEQQATFFELYKRLFIPFIEKQSTAIDKKEKLPVSSGTGDTATVRKQERETDK HHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHH KGREESEKIVASLKARSGGSYTIDRFVQSTEIESDPVLLRVVRQLRYTEQSGRYSFDIEK CCHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHH TIHKTIHDGGMARPVFTPSRLHVEYLMLIDRHNSRDPQAHLHNNLYETLKANNIFVERFW HHHHHHHCCCCCCCCCCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEE FDNSPLLCRNHRHPGGIALSEILGIHEHAALLLFTDGLQCIDTGHESLFAWTGIFKHWQH ECCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHH RYFFSSVPPVLWGERERLLQGVFPFVLPLSVEGMQVMAADLSQMASADCDWLRYWPDKAD HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC YARVPIQTGGRKLDYIGLFFTTGIKRWIAACAVYPELDWNLTLALGKMFSTEKNVLPSYN EEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCHH NISQLLRLGWFIKGNIPDVFRLALLKEWLSHEERVRVYQFLYDQLSQNLPLESEPDYSRR HHHHHHHHCCEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH TLQLAVYDLLAQTNKELFEEKAKQLASIHEPNSRLPDMVSIHLINEHEYSPVFFEIPDAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEECCHHH LKRMGLDPAQTRKAEKVPLNFVRIPEGEFTMGSPASEIDRSGDETQHQVKVSDFYLCKYA HHHCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCHHEEEEHHHHHHHHH VTLAGFKEFIEASGYRTDAEKGDGSYVWDGKSWEKRAGINWRFGISGGVRPQSEENHPVV HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHCCCCEEEECCCCCCCCCCCCCCEE HVSWNDAVAYCKWISEKTGQQFRLPTEAEWEYACRAGTTTPFHTGDNLTTGEANYNGNYP EEECCCHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YNKNPKGEYRENTVPVDSLAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAKGVVENPVG CCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHCCCCCCCCCC PETGSIRVLRGGSWGNYAGYCRSANRNSDTPGDRGSDAGFRLAFVP CCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]