| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356726
Identifier: 119356726
GI number: 119356726
Start: 1026183
End: 1027124
Strand: Direct
Name: 119356726
Synonym: Cpha266_0898
Alternate gene names: NA
Gene position: 1026183-1027124 (Clockwise)
Preceding gene: 119356725
Following gene: 119356727
Centisome position: 32.74
GC content: 42.46
Gene sequence:
>942_bases ATGACCGTTGTGACTGTTGAAGAGATCATCAGGATGTTCGATAATCCGGCAATTCTTGGCGAAGCTTTGCTCGAAGCGGA GAAGTTACCTTTTGTGGGTGACGACAGGATACGGTTCAAGCAAAAACAACAGCGGTACATTGATGGATTGAGTGATCATG AACGGCCTCAATGGGTCGGCGAAATGAAAAACTTTCTGCATCTCTATGACGCTGCAGGCCACGAATCATCAGTGCACCAA TCCGGCAATTATATAGCCGATACCTTCAATCGATGGCATTACCTTGATAAACAGTATTTCAGAAAGCAGTTAAAAGAGAT ATGCAGGGACAGGGATAACCCTGTTAAAGTGCTTTTTATAGAGGAGGATACCGATGCATTTTCAGATTATACGGATGAAA TTCTGAGATCATTTATCAAGGCGGATCATGGATCGATTCATGAAACTATGACGGCAACAAAAGGTGAAATGAGTCATGTC GTTTACCTCGAAAACAGGGATCAGTTGAGAGAGGAGTGGACTGATTTTATGGCAAAGTTTTTTGATTTGTCAGCATCATG TGAAAAAATACCTGAAGAGTTCCGGCGAAAAGGCTTTCATAGGGAGTCGCATATTATTGTCCATTCGGTTGATCAGCTTT CTGAAACTTTTCTTGAAGAATTTCAGCTTTACTACAATTTCTGGACAGAGTTGTCACCTCAGCAGCCGATTTTCCTCTGT CTGTATCTGCCAGAGCATTCATTACCGAGGGAGGTCACCCCGTTAACTTACTGGATACTCTGTTATTGTGATCAATACGA AACCGTCGAGCATCGTCATTTTACCCGTTTTTTCAGAGACTTCAAATGCTACAGGAGAGATGACGAACTTTGTAGATGCA ACACCCCGATGTGCTTCAGCGACGCGGTAAATAAATTGCACTATTGTCAACCATCAAATTGA
Upstream 100 bases:
>100_bases TTGAGCGATCATGAAAGACCTCGCTGGGTTGGCGAAATGAAAAATTTCCTTGCACAGTACCTTTGATTGTATCCCATAAT ATTCAGAAGAGGCAAAACGA
Downstream 100 bases:
>100_bases GCAATGGAAAAATATAATTTCTACGCGAACAGGGACGAAGAGAACAGGAACTGCCATCCATCTGAAAAGAACATAAATCC GTTCGAGCTGAGTCCGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTVVTVEEIIRMFDNPAILGEALLEAEKLPFVGDDRIRFKQKQQRYIDGLSDHERPQWVGEMKNFLHLYDAAGHESSVHQ SGNYIADTFNRWHYLDKQYFRKQLKEICRDRDNPVKVLFIEEDTDAFSDYTDEILRSFIKADHGSIHETMTATKGEMSHV VYLENRDQLREEWTDFMAKFFDLSASCEKIPEEFRRKGFHRESHIIVHSVDQLSETFLEEFQLYYNFWTELSPQQPIFLC LYLPEHSLPREVTPLTYWILCYCDQYETVEHRHFTRFFRDFKCYRRDDELCRCNTPMCFSDAVNKLHYCQPSN
Sequences:
>Translated_313_residues MTVVTVEEIIRMFDNPAILGEALLEAEKLPFVGDDRIRFKQKQQRYIDGLSDHERPQWVGEMKNFLHLYDAAGHESSVHQ SGNYIADTFNRWHYLDKQYFRKQLKEICRDRDNPVKVLFIEEDTDAFSDYTDEILRSFIKADHGSIHETMTATKGEMSHV VYLENRDQLREEWTDFMAKFFDLSASCEKIPEEFRRKGFHRESHIIVHSVDQLSETFLEEFQLYYNFWTELSPQQPIFLC LYLPEHSLPREVTPLTYWILCYCDQYETVEHRHFTRFFRDFKCYRRDDELCRCNTPMCFSDAVNKLHYCQPSN >Mature_312_residues TVVTVEEIIRMFDNPAILGEALLEAEKLPFVGDDRIRFKQKQQRYIDGLSDHERPQWVGEMKNFLHLYDAAGHESSVHQS GNYIADTFNRWHYLDKQYFRKQLKEICRDRDNPVKVLFIEEDTDAFSDYTDEILRSFIKADHGSIHETMTATKGEMSHVV YLENRDQLREEWTDFMAKFFDLSASCEKIPEEFRRKGFHRESHIIVHSVDQLSETFLEEFQLYYNFWTELSPQQPIFLCL YLPEHSLPREVTPLTYWILCYCDQYETVEHRHFTRFFRDFKCYRRDDELCRCNTPMCFSDAVNKLHYCQPSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37588; Mature: 37456
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVTVEEIIRMFDNPAILGEALLEAEKLPFVGDDRIRFKQKQQRYIDGLSDHERPQWVG CCEEEHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH EMKNFLHLYDAAGHESSVHQSGNYIADTFNRWHYLDKQYFRKQLKEICRDRDNPVKVLFI HHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE EEDTDAFSDYTDEILRSFIKADHGSIHETMTATKGEMSHVVYLENRDQLREEWTDFMAKF ECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH FDLSASCEKIPEEFRRKGFHRESHIIVHSVDQLSETFLEEFQLYYNFWTELSPQQPIFLC HCCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LYLPEHSLPREVTPLTYWILCYCDQYETVEHRHFTRFFRDFKCYRRDDELCRCNTPMCFS EECCCCCCCCCCCHHHEEEHEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHH DAVNKLHYCQPSN HHHHHHCCCCCCC >Mature Secondary Structure TVVTVEEIIRMFDNPAILGEALLEAEKLPFVGDDRIRFKQKQQRYIDGLSDHERPQWVG CEEEHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH EMKNFLHLYDAAGHESSVHQSGNYIADTFNRWHYLDKQYFRKQLKEICRDRDNPVKVLFI HHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE EEDTDAFSDYTDEILRSFIKADHGSIHETMTATKGEMSHVVYLENRDQLREEWTDFMAKF ECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH FDLSASCEKIPEEFRRKGFHRESHIIVHSVDQLSETFLEEFQLYYNFWTELSPQQPIFLC HCCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LYLPEHSLPREVTPLTYWILCYCDQYETVEHRHFTRFFRDFKCYRRDDELCRCNTPMCFS EECCCCCCCCCCCHHHEEEHEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHH DAVNKLHYCQPSN HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA