| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356720
Identifier: 119356720
GI number: 119356720
Start: 1016994
End: 1017809
Strand: Reverse
Name: 119356720
Synonym: Cpha266_0892
Alternate gene names: NA
Gene position: 1017809-1016994 (Counterclockwise)
Preceding gene: 119356721
Following gene: 119356719
Centisome position: 32.48
GC content: 44.0
Gene sequence:
>816_bases ATGAGGAGAGTCAAGACAGAGCGGTTTATCGAGCAAATTTCTACAAATGGCAGTGTTCCTTGCCGGTTTGAATGCAGCGA TGGAGCGACTTACTTCGTTAAACATTATGGCAACAATCGGTTACATGTAATCAACGAGCTGATTGGTTCATTGCTTCTGC AACTGCTTGAACTCCCGACTCCGGAAATTGCCCTTGTCGAGGTTGTTCCGGAAAGTATTGAAGGTCTGAATTTTGATCGA AAAGCGCCTTGTGGAGTAGCGTTTGGTTCCAGACAACTACAGGGCCAATCCAAGTCACTTGACAGGGGTGATTTGTACGA TGGGTTGGAAATTCGTAAATTCACCGCTTCTCAATCCTTGACAGGGATTGTTTTGTTCGATATTTGGGTTTATAACACAG ATCGTACTCAGCTCAACCCGAATGTTCTTGTTGAGCAAATCCCTAACAACAGGTTCCGGTTTGTGGCAATAGACCATGCC ATGATTTTTGATGGCATGGAGTACAGGTATCTCGATCGTAGCGAAAAAATCTTGTCGCCTACCATTGAAGATTCCCTCAT AGCTCATCCGCTGTATCGACAAATTCATGACTCGCTTGGTTTATTTTATTCAGAAGAAGCTGACCGGGTTCTTGGTCGGA TAGAGAGCATAAAGGAAGAAGAGCTTCGCGGTGTACTGGAGGAAATCCCGGATGAATGGGAAGTTACAGAGACAGAAAAA GATTCGATTATAAAATACTATCTGTTGCCCCGTAAGCATTGTGTTCGCGGGTTCTATCAACAGCTTTTAGTGGACGCAAA TATCAAGATACCATGA
Upstream 100 bases:
>100_bases GTGAAAGTTCACCGTTCAACCGGCAGCATACGTGAGGCAAATGGTGTATATTCATGCTATACGGAATTGATACAGTACCA CCTGTAGATGCCAGCAATGC
Downstream 100 bases:
>100_bases AAACCTGGTTCACTACCGTAAAATACGCGCCGAATCCTGATCGTGAGGAGTACTTTGGCATCGGATTAATTATGGTTAGC CCTGAGAGCGGTGCTGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRRVKTERFIEQISTNGSVPCRFECSDGATYFVKHYGNNRLHVINELIGSLLLQLLELPTPEIALVEVVPESIEGLNFDR KAPCGVAFGSRQLQGQSKSLDRGDLYDGLEIRKFTASQSLTGIVLFDIWVYNTDRTQLNPNVLVEQIPNNRFRFVAIDHA MIFDGMEYRYLDRSEKILSPTIEDSLIAHPLYRQIHDSLGLFYSEEADRVLGRIESIKEEELRGVLEEIPDEWEVTETEK DSIIKYYLLPRKHCVRGFYQQLLVDANIKIP
Sequences:
>Translated_271_residues MRRVKTERFIEQISTNGSVPCRFECSDGATYFVKHYGNNRLHVINELIGSLLLQLLELPTPEIALVEVVPESIEGLNFDR KAPCGVAFGSRQLQGQSKSLDRGDLYDGLEIRKFTASQSLTGIVLFDIWVYNTDRTQLNPNVLVEQIPNNRFRFVAIDHA MIFDGMEYRYLDRSEKILSPTIEDSLIAHPLYRQIHDSLGLFYSEEADRVLGRIESIKEEELRGVLEEIPDEWEVTETEK DSIIKYYLLPRKHCVRGFYQQLLVDANIKIP >Mature_271_residues MRRVKTERFIEQISTNGSVPCRFECSDGATYFVKHYGNNRLHVINELIGSLLLQLLELPTPEIALVEVVPESIEGLNFDR KAPCGVAFGSRQLQGQSKSLDRGDLYDGLEIRKFTASQSLTGIVLFDIWVYNTDRTQLNPNVLVEQIPNNRFRFVAIDHA MIFDGMEYRYLDRSEKILSPTIEDSLIAHPLYRQIHDSLGLFYSEEADRVLGRIESIKEEELRGVLEEIPDEWEVTETEK DSIIKYYLLPRKHCVRGFYQQLLVDANIKIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31254; Mature: 31254
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVKTERFIEQISTNGSVPCRFECSDGATYFVKHYGNNRLHVINELIGSLLLQLLELPT CCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PEIALVEVVPESIEGLNFDRKAPCGVAFGSRQLQGQSKSLDRGDLYDGLEIRKFTASQSL CCEEEEEECHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEECCCCCC TGIVLFDIWVYNTDRTQLNPNVLVEQIPNNRFRFVAIDHAMIFDGMEYRYLDRSEKILSP CEEEEEEEEEEECCCCCCCCCHHEECCCCCCEEEEEECHHHHHCCCCEEECCCCHHHCCC TIEDSLIAHPLYRQIHDSLGLFYSEEADRVLGRIESIKEEELRGVLEEIPDEWEVTETEK CHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DSIIKYYLLPRKHCVRGFYQQLLVDANIKIP CCEEEEEECCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRRVKTERFIEQISTNGSVPCRFECSDGATYFVKHYGNNRLHVINELIGSLLLQLLELPT CCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PEIALVEVVPESIEGLNFDRKAPCGVAFGSRQLQGQSKSLDRGDLYDGLEIRKFTASQSL CCEEEEEECHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEECCCCCC TGIVLFDIWVYNTDRTQLNPNVLVEQIPNNRFRFVAIDHAMIFDGMEYRYLDRSEKILSP CEEEEEEEEEEECCCCCCCCCHHEECCCCCCEEEEEECHHHHHCCCCEEECCCCHHHCCC TIEDSLIAHPLYRQIHDSLGLFYSEEADRVLGRIESIKEEELRGVLEEIPDEWEVTETEK CHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DSIIKYYLLPRKHCVRGFYQQLLVDANIKIP CCEEEEEECCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA