| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ilvB [H]
Identifier: 119356684
GI number: 119356684
Start: 975704
End: 977425
Strand: Reverse
Name: ilvB [H]
Synonym: Cpha266_0853
Alternate gene names: 119356684
Gene position: 977425-975704 (Counterclockwise)
Preceding gene: 119356685
Following gene: 119356683
Centisome position: 31.19
GC content: 50.41
Gene sequence:
>1722_bases ATGAATGTACCAGGTCAAACACTGAACGGTTCAGAAATATTTTTTGAATGTCTGAGAAGAGAAAACGTTGAATATATCTT CGGGTATCCCGGAGGAGCCCTGCTCAAGGTTTATGAAACGCTCTACGATATCAAGGATATCAAGCACATCCTTGTCCGCC ATGAACAGGGTGCGGCACACATGGCTGAAGGCTATGCCCGCGCCACCGGAAAACCCGGTATCGTGCTGGTAACGTCAGGA CCGGGAGCAACCAATACCGTTACGGGCATTGCCAATGCCTACATGGACTCTTCGCCAATGGTGGTTTTTACCGGTCAGGT ACCCAGTTCGCTTATCGGCAATGACGCATTCCAGGAAGCTGATATCGTGGGCATCACCCGTCCGATCACCAAACACAACT TCCTTGTCAGGGATGTCAGAGAACTTGCGTTAACAATCCGCAAGGCCTTTTACCTTGCTACAAACGGCCGTCCGGGACCG GTTCTTGTCGATATGCCCAAAGACATACTGAACGCTTCATGCGAATTTCAGTGGCCCGAAAACATAGAGATCCGGGGTTT CAAGCCGACAGTAAAATGTCACATGAACCAGGTTGAAAAAGCCGCTCTGAAAATATCGAAAGCTAAAAAACCGCTGTTCT ATATCGGTGGCGGCGTTATCAGTGCCAATGCATCGGAAGAGCTCCGCAAACTTGCCATTCAGCAGAACATTCCTGTCACC ATGACCCTTCAGGGCCTTGGCGCCTTTCCGGGAGACCATCCGCTCAGCATGGGAATGCTCGGCATGCATGGCACCTACTG GGCCAACCAGGCCGTTAACAACTGCGATCTGTTGATTGCTGTCGGAGCACGCTTTGACGACAGGGTTACCGGTAAAGTCG AAACATTCGCCACACAGGCATACAAGATTCATAATGACATAGACCCGACCAACGTCGATAAAAACATAAAAGTCGATCTT CCGATTGTCGGTGATGCGAAGCATTTTCTTTCCGCTCTTCTTGACGAGATGCCCGAAGCGACCGAAAACAGGGAGCCCTG GCTTCAGGAAATCCATAAATGGCAAGAGCAGTGTCCGCTTGCCTATGAAACCGGTGATGAGTTACTGAGAACCGAGTTTG TCATTGAAGAGACATCAAAACAAACCAAAGGAAATGCGGTCGTCGTAACCGACGTCGGGCAGCATCAGATGTGGACATCC CAGTACTACAAGTTCAATAACCCCCGTTCCATCATCACCAGCGGAGGACTCGGAACCATGGGCTATGGCCTGCCGGCGTC TATCGGCGCAGCATTCGGCGTCACAGACCGCCCGATAATCCTGTTCTGCGGAGATGGCGGATTTATGATGAACGTACAGG AACTCGTCACCGCCGTCCACTATAAAATACCGGTGAAAATTTTCCTCATCAACAACACATTCCTCGGTATGGTTCGACAG TGGCAGGAACTTTTTCACAAGGAACAGTACTCCTTTACCGATCTTGGTAACAGCAATCCCGACTTCGTCAAGGTTGCCGA TGCCTTCGGCTGCAGAACGTCCTGCGCAGAAACGCCGGATCAGGCCCGTCAGGCGATAAAGGAGGCTCTTGCATGGAACG AAGGACCGTTCCTTGTCGAATTCAAGGTTATCAAAAAAGATATGGTATTTCCCATGGTCCCTGCGGGCGGCTCTATTTCA GACATGATGCTTGCCCGGTTAAACCCAAAAACAATGGTTTGA
Upstream 100 bases:
>100_bases AAAAAAGGGTATCTGGCAAGATATGCGCAACTTGTCACGTCAGCCTGCACCGGCGCTATACTGAAAACATCTCCTTACTG TGAACCAAAATAAACCGAAC
Downstream 100 bases:
>100_bases ACAACACTCATGAAACACATTATATCCGTTTTGGTTGAGAACAAGTTCGGCTCCCTGAACAGGGTGGCCTCCATGTTCAG CGCCCGAGGGTTCAACCTCG
Product: acetolactate synthase, large subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS; Vegetative protein 105; VEG105 [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MNVPGQTLNGSEIFFECLRRENVEYIFGYPGGALLKVYETLYDIKDIKHILVRHEQGAAHMAEGYARATGKPGIVLVTSG PGATNTVTGIANAYMDSSPMVVFTGQVPSSLIGNDAFQEADIVGITRPITKHNFLVRDVRELALTIRKAFYLATNGRPGP VLVDMPKDILNASCEFQWPENIEIRGFKPTVKCHMNQVEKAALKISKAKKPLFYIGGGVISANASEELRKLAIQQNIPVT MTLQGLGAFPGDHPLSMGMLGMHGTYWANQAVNNCDLLIAVGARFDDRVTGKVETFATQAYKIHNDIDPTNVDKNIKVDL PIVGDAKHFLSALLDEMPEATENREPWLQEIHKWQEQCPLAYETGDELLRTEFVIEETSKQTKGNAVVVTDVGQHQMWTS QYYKFNNPRSIITSGGLGTMGYGLPASIGAAFGVTDRPIILFCGDGGFMMNVQELVTAVHYKIPVKIFLINNTFLGMVRQ WQELFHKEQYSFTDLGNSNPDFVKVADAFGCRTSCAETPDQARQAIKEALAWNEGPFLVEFKVIKKDMVFPMVPAGGSIS DMMLARLNPKTMV
Sequences:
>Translated_573_residues MNVPGQTLNGSEIFFECLRRENVEYIFGYPGGALLKVYETLYDIKDIKHILVRHEQGAAHMAEGYARATGKPGIVLVTSG PGATNTVTGIANAYMDSSPMVVFTGQVPSSLIGNDAFQEADIVGITRPITKHNFLVRDVRELALTIRKAFYLATNGRPGP VLVDMPKDILNASCEFQWPENIEIRGFKPTVKCHMNQVEKAALKISKAKKPLFYIGGGVISANASEELRKLAIQQNIPVT MTLQGLGAFPGDHPLSMGMLGMHGTYWANQAVNNCDLLIAVGARFDDRVTGKVETFATQAYKIHNDIDPTNVDKNIKVDL PIVGDAKHFLSALLDEMPEATENREPWLQEIHKWQEQCPLAYETGDELLRTEFVIEETSKQTKGNAVVVTDVGQHQMWTS QYYKFNNPRSIITSGGLGTMGYGLPASIGAAFGVTDRPIILFCGDGGFMMNVQELVTAVHYKIPVKIFLINNTFLGMVRQ WQELFHKEQYSFTDLGNSNPDFVKVADAFGCRTSCAETPDQARQAIKEALAWNEGPFLVEFKVIKKDMVFPMVPAGGSIS DMMLARLNPKTMV >Mature_573_residues MNVPGQTLNGSEIFFECLRRENVEYIFGYPGGALLKVYETLYDIKDIKHILVRHEQGAAHMAEGYARATGKPGIVLVTSG PGATNTVTGIANAYMDSSPMVVFTGQVPSSLIGNDAFQEADIVGITRPITKHNFLVRDVRELALTIRKAFYLATNGRPGP VLVDMPKDILNASCEFQWPENIEIRGFKPTVKCHMNQVEKAALKISKAKKPLFYIGGGVISANASEELRKLAIQQNIPVT MTLQGLGAFPGDHPLSMGMLGMHGTYWANQAVNNCDLLIAVGARFDDRVTGKVETFATQAYKIHNDIDPTNVDKNIKVDL PIVGDAKHFLSALLDEMPEATENREPWLQEIHKWQEQCPLAYETGDELLRTEFVIEETSKQTKGNAVVVTDVGQHQMWTS QYYKFNNPRSIITSGGLGTMGYGLPASIGAAFGVTDRPIILFCGDGGFMMNVQELVTAVHYKIPVKIFLINNTFLGMVRQ WQELFHKEQYSFTDLGNSNPDFVKVADAFGCRTSCAETPDQARQAIKEALAWNEGPFLVEFKVIKKDMVFPMVPAGGSIS DMMLARLNPKTMV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=577, Percent_Identity=26.8630849220104, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI21361361, Length=572, Percent_Identity=24.6503496503496, Blast_Score=147, Evalue=2e-35, Organism=Escherichia coli, GI87081685, Length=570, Percent_Identity=44.9122807017544, Blast_Score=539, Evalue=1e-154, Organism=Escherichia coli, GI1790104, Length=558, Percent_Identity=42.831541218638, Blast_Score=445, Evalue=1e-126, Organism=Escherichia coli, GI1786717, Length=542, Percent_Identity=33.210332103321, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1787096, Length=546, Percent_Identity=26.007326007326, Blast_Score=173, Evalue=3e-44, Organism=Escherichia coli, GI1788716, Length=590, Percent_Identity=26.1016949152542, Blast_Score=155, Evalue=7e-39, Organism=Caenorhabditis elegans, GI17531299, Length=565, Percent_Identity=25.4867256637168, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17531301, Length=565, Percent_Identity=25.4867256637168, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17542570, Length=577, Percent_Identity=24.0901213171577, Blast_Score=136, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6323755, Length=573, Percent_Identity=46.5968586387435, Blast_Score=490, Evalue=1e-139, Organism=Saccharomyces cerevisiae, GI6320123, Length=534, Percent_Identity=25.0936329588015, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6320816, Length=499, Percent_Identity=23.6472945891784, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323163, Length=522, Percent_Identity=23.7547892720307, Blast_Score=100, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6321524, Length=527, Percent_Identity=23.719165085389, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6323073, Length=481, Percent_Identity=23.9085239085239, Blast_Score=95, Evalue=3e-20, Organism=Drosophila melanogaster, GI19922626, Length=482, Percent_Identity=26.7634854771784, Blast_Score=157, Evalue=1e-38,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 63310; Mature: 63310
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVPGQTLNGSEIFFECLRRENVEYIFGYPGGALLKVYETLYDIKDIKHILVRHEQGAAH CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MAEGYARATGKPGIVLVTSGPGATNTVTGIANAYMDSSPMVVFTGQVPSSLIGNDAFQEA HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCCHHCCC DIVGITRPITKHNFLVRDVRELALTIRKAFYLATNGRPGPVLVDMPKDILNASCEFQWPE CEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCHHHHCCCCEECCCC NIEIRGFKPTVKCHMNQVEKAALKISKAKKPLFYIGGGVISANASEELRKLAIQQNIPVT CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHCCCCEE MTLQGLGAFPGDHPLSMGMLGMHGTYWANQAVNNCDLLIAVGARFDDRVTGKVETFATQA EEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH YKIHNDIDPTNVDKNIKVDLPIVGDAKHFLSALLDEMPEATENREPWLQEIHKWQEQCPL EEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC AYETGDELLRTEFVIEETSKQTKGNAVVVTDVGQHQMWTSQYYKFNNPRSIITSGGLGTM EECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHEEECCCCEEEECCCCCCC GYGLPASIGAAFGVTDRPIILFCGDGGFMMNVQELVTAVHYKIPVKIFLINNTFLGMVRQ CCCCCHHHCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHEECCEEEEEECCHHHHHHHH WQELFHKEQYSFTDLGNSNPDFVKVADAFGCRTSCAETPDQARQAIKEALAWNEGPFLVE HHHHHHHCCCCCCCCCCCCCCEEEEECHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE FKVIKKDMVFPMVPAGGSISDMMLARLNPKTMV EEEECCCCCCEECCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MNVPGQTLNGSEIFFECLRRENVEYIFGYPGGALLKVYETLYDIKDIKHILVRHEQGAAH CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MAEGYARATGKPGIVLVTSGPGATNTVTGIANAYMDSSPMVVFTGQVPSSLIGNDAFQEA HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCCHHCCC DIVGITRPITKHNFLVRDVRELALTIRKAFYLATNGRPGPVLVDMPKDILNASCEFQWPE CEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCHHHHCCCCEECCCC NIEIRGFKPTVKCHMNQVEKAALKISKAKKPLFYIGGGVISANASEELRKLAIQQNIPVT CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHCCCCEE MTLQGLGAFPGDHPLSMGMLGMHGTYWANQAVNNCDLLIAVGARFDDRVTGKVETFATQA EEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH YKIHNDIDPTNVDKNIKVDLPIVGDAKHFLSALLDEMPEATENREPWLQEIHKWQEQCPL EEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC AYETGDELLRTEFVIEETSKQTKGNAVVVTDVGQHQMWTSQYYKFNNPRSIITSGGLGTM EECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHEEECCCCEEEECCCCCCC GYGLPASIGAAFGVTDRPIILFCGDGGFMMNVQELVTAVHYKIPVKIFLINNTFLGMVRQ CCCCCHHHCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHEECCEEEEEECCHHHHHHHH WQELFHKEQYSFTDLGNSNPDFVKVADAFGCRTSCAETPDQARQAIKEALAWNEGPFLVE HHHHHHHCCCCCCCCCCCCCCEEEEECHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE FKVIKKDMVFPMVPAGGSISDMMLARLNPKTMV EEEECCCCCCEECCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377; 1577690; 9298659 [H]