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The map label for this gene is glcD [H]

Identifier: 119356647

GI number: 119356647

Start: 928975

End: 930462

Strand: Reverse

Name: glcD [H]

Synonym: Cpha266_0816

Alternate gene names: 119356647

Gene position: 930462-928975 (Counterclockwise)

Preceding gene: 119356648

Following gene: 119356646

Centisome position: 29.69

GC content: 48.86

Gene sequence:

>1488_bases
ATGATCTTTAAAAATGACCCTGCTTCCATTCAGAGTTTTCTTGAGGATACCAGCAATATCAGAACGGGCGCTACCCCCGG
AGTCTATTTTCCTGAAAACGCTGCCGACATCGCAGGTCTTCTCAAAGAGGCTGCGCATCTTCAGCGACGCTATACCATAG
CCGGAAACGGAACAGGAACAACCGGCGGAAGAATTCCTGACGGCAGTTATGTCATCTCCATGCAGAACCTCAGGAGTATC
GGCGAAATCAGAGAATTGACACCGACTGAAGCCCTTATTACCGTCGAAGCTGGAGCACTGCTTGAGGATATTCAGAAAAA
AACTCAGCATACGGGGTGGTTATACCCTCCCGACCCGACCGAAACGCTCTGCTTTATCGGAAGCACCATTGCCAACAACT
CCTCCGGTTCACGCTCGTTCAAATACGGACCGACACGAAACCATATCCGCAGAATTCTTGCGGTTCTTCCCGAAGGGGAT
ATCCTGAATCTTACCCGCGGGGAGATAGTTGCCGACCGGAACGGCATGTTTCACCTTGACCTCCCTGTTGCAGGACAAGT
CACCTTCAGCCGTCCTGACTACCCGATGCCCGCAACCTCCAAGCACAACGCCGGGTATTATTCCCGCGAAGGCATGGATC
TTGTCGATCTGTTCATCGGATCGGAGGGAACGCTCGGCGTCATTATCGAGGCTGACCTGATACTGATCCGCGAACCTGAA
AAATTTTTTTCGTGCATGATTTTTTTTCAGGATATCGACGATCTTTTCCGTTTTGTTGCCGCAATCAAACAACCCGAAGC
AATCGTTTCGCCAAGAGTTGTTGAACTGTTCGACGAAAACTCCCTGCTCTTTCTGCAGAAACAGTATCCGAATATTCCAC
ACGATGTAAAGGGGGCGATCTTTATTGAACAGGAGACAACGCGAAACGATGAAGATCACCACCTCGAAGCATGGCTTGAA
CTCATGGAACGGCATCGCGCGCTTTCGGATGCATCATGGGTAGCGCTTGACCGGAAAGCGCAGCAGGAACTCACCGCATT
CCGCCATGCATTGCCGATTCTGGTTAATGAGTGGCTAAGCAAGCAGCAGGAGAGCAAAATCAGTACCGACATGGCCGTCC
CGGACAGCGTATTTCGCGAGCTTTTCGATTTCTATACTGAAACTTGCAGGAAGAACGGCTTCGCCTATATTATTTTCGGA
CATATCGGCAACGCCCATGTTCACCTGAATATTCTGCCCCGCAACAGAGATGAGTTTATGCATGCAAAAAAGCTTTATCT
TGACTTTGTCGATAAAGTACTTAAACTCGGGGGCACGCTTTCTGCCGAACACGGTATCGGAAAACTCAAAGCGGAATATC
TTGTCAGAATGTATGGCGAAAAAGGAATACAGGAGATGGCGACAATAAAAAAAAGTCTCGATCCCTTTCTGGTACTCAAT
ATCGGAAATCTTATCCCGGTATCGTATCTGAAAACAGCAAACCATTGA

Upstream 100 bases:

>100_bases
TCGATATCGACAGCGCCGAAAGTTCAGACCGACACCCCGCCAGTCCCGCATGAACCGGAAGATAATGGCACTGTTGAACC
GCAAAGTGAGGGGGCCACGA

Downstream 100 bases:

>100_bases
TAATAAGGTGTCAAAAAAACAACAGCCGCAAACCTTTGTGCAGGCGATCCATAATCGAAAAGCCCGCTTTGAATTTCATA
TTCTCGAAACCATGGTGGCC

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MIFKNDPASIQSFLEDTSNIRTGATPGVYFPENAADIAGLLKEAAHLQRRYTIAGNGTGTTGGRIPDGSYVISMQNLRSI
GEIRELTPTEALITVEAGALLEDIQKKTQHTGWLYPPDPTETLCFIGSTIANNSSGSRSFKYGPTRNHIRRILAVLPEGD
ILNLTRGEIVADRNGMFHLDLPVAGQVTFSRPDYPMPATSKHNAGYYSREGMDLVDLFIGSEGTLGVIIEADLILIREPE
KFFSCMIFFQDIDDLFRFVAAIKQPEAIVSPRVVELFDENSLLFLQKQYPNIPHDVKGAIFIEQETTRNDEDHHLEAWLE
LMERHRALSDASWVALDRKAQQELTAFRHALPILVNEWLSKQQESKISTDMAVPDSVFRELFDFYTETCRKNGFAYIIFG
HIGNAHVHLNILPRNRDEFMHAKKLYLDFVDKVLKLGGTLSAEHGIGKLKAEYLVRMYGEKGIQEMATIKKSLDPFLVLN
IGNLIPVSYLKTANH

Sequences:

>Translated_495_residues
MIFKNDPASIQSFLEDTSNIRTGATPGVYFPENAADIAGLLKEAAHLQRRYTIAGNGTGTTGGRIPDGSYVISMQNLRSI
GEIRELTPTEALITVEAGALLEDIQKKTQHTGWLYPPDPTETLCFIGSTIANNSSGSRSFKYGPTRNHIRRILAVLPEGD
ILNLTRGEIVADRNGMFHLDLPVAGQVTFSRPDYPMPATSKHNAGYYSREGMDLVDLFIGSEGTLGVIIEADLILIREPE
KFFSCMIFFQDIDDLFRFVAAIKQPEAIVSPRVVELFDENSLLFLQKQYPNIPHDVKGAIFIEQETTRNDEDHHLEAWLE
LMERHRALSDASWVALDRKAQQELTAFRHALPILVNEWLSKQQESKISTDMAVPDSVFRELFDFYTETCRKNGFAYIIFG
HIGNAHVHLNILPRNRDEFMHAKKLYLDFVDKVLKLGGTLSAEHGIGKLKAEYLVRMYGEKGIQEMATIKKSLDPFLVLN
IGNLIPVSYLKTANH
>Mature_495_residues
MIFKNDPASIQSFLEDTSNIRTGATPGVYFPENAADIAGLLKEAAHLQRRYTIAGNGTGTTGGRIPDGSYVISMQNLRSI
GEIRELTPTEALITVEAGALLEDIQKKTQHTGWLYPPDPTETLCFIGSTIANNSSGSRSFKYGPTRNHIRRILAVLPEGD
ILNLTRGEIVADRNGMFHLDLPVAGQVTFSRPDYPMPATSKHNAGYYSREGMDLVDLFIGSEGTLGVIIEADLILIREPE
KFFSCMIFFQDIDDLFRFVAAIKQPEAIVSPRVVELFDENSLLFLQKQYPNIPHDVKGAIFIEQETTRNDEDHHLEAWLE
LMERHRALSDASWVALDRKAQQELTAFRHALPILVNEWLSKQQESKISTDMAVPDSVFRELFDFYTETCRKNGFAYIIFG
HIGNAHVHLNILPRNRDEFMHAKKLYLDFVDKVLKLGGTLSAEHGIGKLKAEYLVRMYGEKGIQEMATIKKSLDPFLVLN
IGNLIPVSYLKTANH

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595754, Length=493, Percent_Identity=26.5720081135903, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI37595756, Length=483, Percent_Identity=26.7080745341615, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1787977, Length=494, Percent_Identity=25.5060728744939, Blast_Score=112, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17534361, Length=508, Percent_Identity=24.8031496062992, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71992373, Length=483, Percent_Identity=23.1884057971014, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71992381, Length=428, Percent_Identity=23.1308411214953, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71992392, Length=384, Percent_Identity=23.6979166666667, Blast_Score=96, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6320023, Length=487, Percent_Identity=23.8193018480493, Blast_Score=119, Evalue=9e-28,
Organism=Saccharomyces cerevisiae, GI6320027, Length=483, Percent_Identity=24.4306418219462, Blast_Score=110, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6320764, Length=492, Percent_Identity=22.7642276422764, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI18921117, Length=468, Percent_Identity=26.4957264957265, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24639277, Length=468, Percent_Identity=26.4957264957265, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24639275, Length=468, Percent_Identity=26.4957264957265, Blast_Score=133, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 55612; Mature: 55612

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKNDPASIQSFLEDTSNIRTGATPGVYFPENAADIAGLLKEAAHLQRRYTIAGNGTGT
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCC
TGGRIPDGSYVISMQNLRSIGEIRELTPTEALITVEAGALLEDIQKKTQHTGWLYPPDPT
CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCC
ETLCFIGSTIANNSSGSRSFKYGPTRNHIRRILAVLPEGDILNLTRGEIVADRNGMFHLD
CCEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEECCCCEEEEC
LPVAGQVTFSRPDYPMPATSKHNAGYYSREGMDLVDLFIGSEGTLGVIIEADLILIREPE
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEECCH
KFFSCMIFFQDIDDLFRFVAAIKQPEAIVSPRVVELFDENSLLFLQKQYPNIPHDVKGAI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEEECCCCEEEEEECCCCCCCCCCCEE
FIEQETTRNDEDHHLEAWLELMERHRALSDASWVALDRKAQQELTAFRHALPILVNEWLS
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHH
KQQESKISTDMAVPDSVFRELFDFYTETCRKNGFAYIIFGHIGNAHVHLNILPRNRDEFM
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCHHHHH
HAKKLYLDFVDKVLKLGGTLSAEHGIGKLKAEYLVRMYGEKGIQEMATIKKSLDPFLVLN
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IGNLIPVSYLKTANH
CCCCCCHHHHHCCCC
>Mature Secondary Structure
MIFKNDPASIQSFLEDTSNIRTGATPGVYFPENAADIAGLLKEAAHLQRRYTIAGNGTGT
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCC
TGGRIPDGSYVISMQNLRSIGEIRELTPTEALITVEAGALLEDIQKKTQHTGWLYPPDPT
CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCC
ETLCFIGSTIANNSSGSRSFKYGPTRNHIRRILAVLPEGDILNLTRGEIVADRNGMFHLD
CCEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEECCCCEEEEC
LPVAGQVTFSRPDYPMPATSKHNAGYYSREGMDLVDLFIGSEGTLGVIIEADLILIREPE
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEECCH
KFFSCMIFFQDIDDLFRFVAAIKQPEAIVSPRVVELFDENSLLFLQKQYPNIPHDVKGAI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEEECCCCEEEEEECCCCCCCCCCCEE
FIEQETTRNDEDHHLEAWLELMERHRALSDASWVALDRKAQQELTAFRHALPILVNEWLS
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHH
KQQESKISTDMAVPDSVFRELFDFYTETCRKNGFAYIIFGHIGNAHVHLNILPRNRDEFM
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCHHHHH
HAKKLYLDFVDKVLKLGGTLSAEHGIGKLKAEYLVRMYGEKGIQEMATIKKSLDPFLVLN
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IGNLIPVSYLKTANH
CCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]