| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356585
Identifier: 119356585
GI number: 119356585
Start: 854326
End: 855699
Strand: Reverse
Name: 119356585
Synonym: Cpha266_0752
Alternate gene names: NA
Gene position: 855699-854326 (Counterclockwise)
Preceding gene: 119356589
Following gene: 119356581
Centisome position: 27.3
GC content: 54.29
Gene sequence:
>1374_bases ATGGCGCGAAAAATCGTGAGCAGCTATGCCGTCTTCGAAAACCTCGGAGGCACAAGAGACATTGCGTTTTATTACGAGTC GGGAGGTGCCGATTCGGTTTCAGGCGTCAGCGCCGCTGAAGCGGATTATATCGTCGGTCTTTTACGTAACGAAAAACCTG TTTCGTATGACCACAGCCTGAAAAGGCTCTCAACCGGCAGCATTGAGTCTGTCGGCGAATCGGAGGAGCCTGTGCCGAAT ATCGATACATGGCTATCCTCACGTCCGCTGATTGCCGGATCGATAGTCTGGGAAGATACGACGGGTGCGCATGCCTGGAG TTCATGGAGCGAATCGCAGAAAGCTGAGCTTCGACTGGCGTTCACTCTTGCCTGGAACCGCAATACCATAGCGGTTGCAG ATGTTCCTCTGAATCAGGCTGTCATGGGAGACGAAGATCAGTCAGCGACTGTGCTTTCGCAGGGCGATGCCCGGGCTTAT TTCACGGCAAGTGTCGCCCACTCGCTGGTTGTAGAGATACAACGGCAGGTTGGCTGGTCGATAGAAGGGTACAATACAGC GCTGCTTGCCCAACTGTTCGACAGCCGTGAGATGTTCCGCTGGAATGGCTCTCCTGCGGGGTATCGAATCGATCATATGC ATGGTCATCTGGTTCCCGCTTCTCCGTCGTTCAGTTATGCTTTTCTTGGTTCAAACTCACTTATAGCACCTGCCAGAATC GACACCATAGGGCGTCTTGTCGGATGGTGCCGCGACAATCTGGTGCATTTTTCGGGAGGAACGACTGCGGCAAATATGGA AGACCAGTGGCAGTACCGGGGATATCCCCCATTGAGCAGGGTTATCAATGGTACCCTTCAGTTATCACATCCTCAATTCG GCATGCGGCACCGGACCGCCGGATGCTGGGGCACGGTGGGTCTGTTCAGGACTCTGCTGCGCGTGGTAAACATACCGGTG AAACTGGTTACGAATGCCGGGCATGCCCAGCCATGGTTCATGGCCGACAGCCGTTACCTGAGCCATGGCGACGATCCCTA TAACGCGTTGACCAGATCGACACCTCCTTATGCCGCTGATGAACTTTTTATCGACCAGGCCCGGTTCGACGCATGGTTTG GTGCAGGCGTAAGTAATGAAAAGAAAGAGGATAATATCGGCAGGCGCCCCCGTGAACTGGCCATCGTGCATCTGCCGAAC TATCTGCTTCATGCCCGCTGCGATGATCTGCATGACAGCAAGTCTCATAGTGCCGGCAAGGTGTATGAGATTTTTTCCCG TGACTACACGGTCGCCGAGCTCGAGGCGCAGAACCTGTGGATGAGGATGGATGCAAAAATCGCCAGCTTTGGCGGCTGTT CGCATCTTCCCTGA
Upstream 100 bases:
>100_bases CGTCGATCTGCTGCGCAATGAAAAACCGATGTCTTACGACCACGCTCTCAAGCGTCTTTCCACCTACAGTTTGGAACCTG TCGGTGAGGAGGAATAAGCT
Downstream 100 bases:
>100_bases GCCAGCAATCCTGCCGGCATGACAGTTTTTCTGATCATGCCGGTTTTCTTTTTTTCCGCAACAGGAACTCCCATAAGCTG AATCCATACAGGAGTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MARKIVSSYAVFENLGGTRDIAFYYESGGADSVSGVSAAEADYIVGLLRNEKPVSYDHSLKRLSTGSIESVGESEEPVPN IDTWLSSRPLIAGSIVWEDTTGAHAWSSWSESQKAELRLAFTLAWNRNTIAVADVPLNQAVMGDEDQSATVLSQGDARAY FTASVAHSLVVEIQRQVGWSIEGYNTALLAQLFDSREMFRWNGSPAGYRIDHMHGHLVPASPSFSYAFLGSNSLIAPARI DTIGRLVGWCRDNLVHFSGGTTAANMEDQWQYRGYPPLSRVINGTLQLSHPQFGMRHRTAGCWGTVGLFRTLLRVVNIPV KLVTNAGHAQPWFMADSRYLSHGDDPYNALTRSTPPYAADELFIDQARFDAWFGAGVSNEKKEDNIGRRPRELAIVHLPN YLLHARCDDLHDSKSHSAGKVYEIFSRDYTVAELEAQNLWMRMDAKIASFGGCSHLP
Sequences:
>Translated_457_residues MARKIVSSYAVFENLGGTRDIAFYYESGGADSVSGVSAAEADYIVGLLRNEKPVSYDHSLKRLSTGSIESVGESEEPVPN IDTWLSSRPLIAGSIVWEDTTGAHAWSSWSESQKAELRLAFTLAWNRNTIAVADVPLNQAVMGDEDQSATVLSQGDARAY FTASVAHSLVVEIQRQVGWSIEGYNTALLAQLFDSREMFRWNGSPAGYRIDHMHGHLVPASPSFSYAFLGSNSLIAPARI DTIGRLVGWCRDNLVHFSGGTTAANMEDQWQYRGYPPLSRVINGTLQLSHPQFGMRHRTAGCWGTVGLFRTLLRVVNIPV KLVTNAGHAQPWFMADSRYLSHGDDPYNALTRSTPPYAADELFIDQARFDAWFGAGVSNEKKEDNIGRRPRELAIVHLPN YLLHARCDDLHDSKSHSAGKVYEIFSRDYTVAELEAQNLWMRMDAKIASFGGCSHLP >Mature_456_residues ARKIVSSYAVFENLGGTRDIAFYYESGGADSVSGVSAAEADYIVGLLRNEKPVSYDHSLKRLSTGSIESVGESEEPVPNI DTWLSSRPLIAGSIVWEDTTGAHAWSSWSESQKAELRLAFTLAWNRNTIAVADVPLNQAVMGDEDQSATVLSQGDARAYF TASVAHSLVVEIQRQVGWSIEGYNTALLAQLFDSREMFRWNGSPAGYRIDHMHGHLVPASPSFSYAFLGSNSLIAPARID TIGRLVGWCRDNLVHFSGGTTAANMEDQWQYRGYPPLSRVINGTLQLSHPQFGMRHRTAGCWGTVGLFRTLLRVVNIPVK LVTNAGHAQPWFMADSRYLSHGDDPYNALTRSTPPYAADELFIDQARFDAWFGAGVSNEKKEDNIGRRPRELAIVHLPNY LLHARCDDLHDSKSHSAGKVYEIFSRDYTVAELEAQNLWMRMDAKIASFGGCSHLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50564; Mature: 50433
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKIVSSYAVFENLGGTRDIAFYYESGGADSVSGVSAAEADYIVGLLRNEKPVSYDHSL CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCCCHHHHH KRLSTGSIESVGESEEPVPNIDTWLSSRPLIAGSIVWEDTTGAHAWSSWSESQKAELRLA HHHCCCCCHHCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEE FTLAWNRNTIAVADVPLNQAVMGDEDQSATVLSQGDARAYFTASVAHSLVVEIQRQVGWS EEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHCCE IEGYNTALLAQLFDSREMFRWNGSPAGYRIDHMHGHLVPASPSFSYAFLGSNSLIAPARI ECCCCHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEECCCCCEEEEECCCCEECCHHH DTIGRLVGWCRDNLVHFSGGTTAANMEDQWQYRGYPPLSRVINGTLQLSHPQFGMRHRTA HHHHHHHHHHHCCEEEECCCCEECCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCC GCWGTVGLFRTLLRVVNIPVKLVTNAGHAQPWFMADSRYLSHGDDPYNALTRSTPPYAAD CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCHHCCCCCHHHHHHCCCCCCCHH ELFIDQARFDAWFGAGVSNEKKEDNIGRRPRELAIVHLPNYLLHARCDDLHDSKSHSAGK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCH VYEIFSRDYTVAELEAQNLWMRMDAKIASFGGCSHLP HHHHHCCCCEEEEEEHHHEEEEECCHHHCCCCCCCCC >Mature Secondary Structure ARKIVSSYAVFENLGGTRDIAFYYESGGADSVSGVSAAEADYIVGLLRNEKPVSYDHSL CHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCCCHHHHH KRLSTGSIESVGESEEPVPNIDTWLSSRPLIAGSIVWEDTTGAHAWSSWSESQKAELRLA HHHCCCCCHHCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEE FTLAWNRNTIAVADVPLNQAVMGDEDQSATVLSQGDARAYFTASVAHSLVVEIQRQVGWS EEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHCCE IEGYNTALLAQLFDSREMFRWNGSPAGYRIDHMHGHLVPASPSFSYAFLGSNSLIAPARI ECCCCHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEECCCCCEEEEECCCCEECCHHH DTIGRLVGWCRDNLVHFSGGTTAANMEDQWQYRGYPPLSRVINGTLQLSHPQFGMRHRTA HHHHHHHHHHHCCEEEECCCCEECCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCC GCWGTVGLFRTLLRVVNIPVKLVTNAGHAQPWFMADSRYLSHGDDPYNALTRSTPPYAAD CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCHHCCCCCHHHHHHCCCCCCCHH ELFIDQARFDAWFGAGVSNEKKEDNIGRRPRELAIVHLPNYLLHARCDDLHDSKSHSAGK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCH VYEIFSRDYTVAELEAQNLWMRMDAKIASFGGCSHLP HHHHHCCCCEEEEEEHHHEEEEECCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA