Click here to switch to the map view.

The map label for this gene is 119356508

Identifier: 119356508

GI number: 119356508

Start: 767535

End: 769052

Strand: Reverse

Name: 119356508

Synonym: Cpha266_0673

Alternate gene names: NA

Gene position: 769052-767535 (Counterclockwise)

Preceding gene: 119356516

Following gene: 119356507

Centisome position: 24.54

GC content: 49.67

Gene sequence:

>1518_bases
ATGAACTGTTCCGTTTTCAGCGAAGGAGTTGCTATATTCAGGACAGAACTTCAGCATCCATCATACCAACTGCTCATGTT
TCCTCTGGTCTTCGAAATCAACACAAGAATCTGGCTGCAAAAACTCAGCGATCAGCATCAAAAAAACATAACGCTCGCCA
CTGTTCCCGACACAGAATTCACGTTTTTCAGCGAGTGCGGTTTTGATATTGTCTGGCTGATGGGCGTCTGGACACCAAGT
CGATACAGTAAAGCCATCGCAACGGCACATCCGGGACTGCGCAGCTCATTTCTGAGCTATCATGATCCTCTCGACCCTGA
CACGATTGTCTCTTCGCCCTACGCCATACCCTCATACACCGTTCATGACAAGCTTGGAGGGAAAGACGAGCTCCTTGCCT
TCCGTGAAAAACTCAATGCGCTGGGCATTCTGCTCATGCTTGACTTTGTGCCGAACCATCTTGCCCTTGATAACGACTGG
CTCCCGAATCATCCGGAGTATTTCATCCCGGTCTCGAAAGATGAACAAAGCCAGGACCCTGAATCCTGTTTTGAATACGC
CGCGGGAAAGTACCTCGCCCACGGAAAAGATCCCTACTTCCCCTCATGGACTGACACGCTTCAACTCAATTATGCAAACC
CTGCAACACGGGAGATGATGAGAGAGAACCTGCTCATGATCAGCTCGCTTTGCGATGGCGTCCGGTGCGATGTCGCCATG
CTCATCCTTAAAGAGATATTCAACACCACATGGAGTAACCTCAGCGGCCACATGGAAGATGAGTTCTGGCTCGAGGCAAT
AGCCGCAGTTAAAAACCGCTTTCCCGATTTTATCTTTCTTGCGGAAGCATACTGGAACAAAGAGTGGGATTTGCAGCAGC
TTGGATTTGATTTCACCTATGACATGCCGTTTTATGATCACCTCACCCACGCTCCGGTCAATGTCGAAAAACTCATGGGC
CATATGCAGGCTCAATGGGAGTACCAGCAACACCTCTGCCGCTTTATTGAAAACCATGACGAGCCCCGCGCAGCGGAAAA
GATCGGTCTGAATAACGCTGTTGCCGCTCTGGTTCTTCTTACGGCGCCTGGCATGCACCTCATTCATGAAAACCAGATGG
ATGGGTACAAAAAGAAAATCCCCGTACAGCTTAATCGTCAGGAACCCGAAGCGGGCGATGCCGAGCTTCACCTGCTCTAC
CGACGCCTGTTTCAATTGCAGAAAAAAGCGGTGTTCCGGGAAGGTAACATTGAGTGGTTGCATCTGAATATCATCCGTGC
CGCGCACTGTTTCGGTTATCACCGCTATCGGAATGAAGAACACGCGTTTATTCTTGCCAATTTCAGCGCCACAGGTATAA
GCATTGCCTTCAGTCATCCGTTTCTTCTGAACAAGAACAACAATAATCTCACTATCCTGTGCACTTCATGCAGAGATAAA
ACGCCGGAGATCCTTCTCGATGGAGAGACCATGCACATCCGTCTCGCACCGCATGAAGGAGTGGTCGTAACCTGCTGA

Upstream 100 bases:

>100_bases
TCGTATAAGTTTGTCCGAATTACAAACTCCCCGAAACAAAAATCCCTGCCATCCCTGCCTGCTGTCAAGTTACCGTCCAG
ATAAACCGATCATATACGAT

Downstream 100 bases:

>100_bases
TCGTCATACAAACAAGGCATTCCGCATCCTCTCTCTTGACTGCGGAGTGCCGGGAACTGTTCGTTCATTATACTCTTTTC
GTTCATCTGACGTCGACATG

Product: alpha amylase, catalytic region

Products: NA

Alternate protein names: Alpha Amylase; Alpha-Amylase Family Protein; Alpha Amylase Domain-Containing Protein; Alpha-Amylase; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain-Containing Protein; Alpha Amylase Family Protein; Glycosidase; Alpha Amylase Domain Protein; Glycoside Hydrolase

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MNCSVFSEGVAIFRTELQHPSYQLLMFPLVFEINTRIWLQKLSDQHQKNITLATVPDTEFTFFSECGFDIVWLMGVWTPS
RYSKAIATAHPGLRSSFLSYHDPLDPDTIVSSPYAIPSYTVHDKLGGKDELLAFREKLNALGILLMLDFVPNHLALDNDW
LPNHPEYFIPVSKDEQSQDPESCFEYAAGKYLAHGKDPYFPSWTDTLQLNYANPATREMMRENLLMISSLCDGVRCDVAM
LILKEIFNTTWSNLSGHMEDEFWLEAIAAVKNRFPDFIFLAEAYWNKEWDLQQLGFDFTYDMPFYDHLTHAPVNVEKLMG
HMQAQWEYQQHLCRFIENHDEPRAAEKIGLNNAVAALVLLTAPGMHLIHENQMDGYKKKIPVQLNRQEPEAGDAELHLLY
RRLFQLQKKAVFREGNIEWLHLNIIRAAHCFGYHRYRNEEHAFILANFSATGISIAFSHPFLLNKNNNNLTILCTSCRDK
TPEILLDGETMHIRLAPHEGVVVTC

Sequences:

>Translated_505_residues
MNCSVFSEGVAIFRTELQHPSYQLLMFPLVFEINTRIWLQKLSDQHQKNITLATVPDTEFTFFSECGFDIVWLMGVWTPS
RYSKAIATAHPGLRSSFLSYHDPLDPDTIVSSPYAIPSYTVHDKLGGKDELLAFREKLNALGILLMLDFVPNHLALDNDW
LPNHPEYFIPVSKDEQSQDPESCFEYAAGKYLAHGKDPYFPSWTDTLQLNYANPATREMMRENLLMISSLCDGVRCDVAM
LILKEIFNTTWSNLSGHMEDEFWLEAIAAVKNRFPDFIFLAEAYWNKEWDLQQLGFDFTYDMPFYDHLTHAPVNVEKLMG
HMQAQWEYQQHLCRFIENHDEPRAAEKIGLNNAVAALVLLTAPGMHLIHENQMDGYKKKIPVQLNRQEPEAGDAELHLLY
RRLFQLQKKAVFREGNIEWLHLNIIRAAHCFGYHRYRNEEHAFILANFSATGISIAFSHPFLLNKNNNNLTILCTSCRDK
TPEILLDGETMHIRLAPHEGVVVTC
>Mature_505_residues
MNCSVFSEGVAIFRTELQHPSYQLLMFPLVFEINTRIWLQKLSDQHQKNITLATVPDTEFTFFSECGFDIVWLMGVWTPS
RYSKAIATAHPGLRSSFLSYHDPLDPDTIVSSPYAIPSYTVHDKLGGKDELLAFREKLNALGILLMLDFVPNHLALDNDW
LPNHPEYFIPVSKDEQSQDPESCFEYAAGKYLAHGKDPYFPSWTDTLQLNYANPATREMMRENLLMISSLCDGVRCDVAM
LILKEIFNTTWSNLSGHMEDEFWLEAIAAVKNRFPDFIFLAEAYWNKEWDLQQLGFDFTYDMPFYDHLTHAPVNVEKLMG
HMQAQWEYQQHLCRFIENHDEPRAAEKIGLNNAVAALVLLTAPGMHLIHENQMDGYKKKIPVQLNRQEPEAGDAELHLLY
RRLFQLQKKAVFREGNIEWLHLNIIRAAHCFGYHRYRNEEHAFILANFSATGISIAFSHPFLLNKNNNNLTILCTSCRDK
TPEILLDGETMHIRLAPHEGVVVTC

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58218; Mature: 58218

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCSVFSEGVAIFRTELQHPSYQLLMFPLVFEINTRIWLQKLSDQHQKNITLATVPDTEF
CCCCCHHCCHHHHHHHHCCCCCEEEEEEHHHHHCHHHHHHHHHHHHHCCEEEEECCCCCC
TFFSECGFDIVWLMGVWTPSRYSKAIATAHPGLRSSFLSYHDPLDPDTIVSSPYAIPSYT
EEHHHCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEE
VHDKLGGKDELLAFREKLNALGILLMLDFVPNHLALDNDWLPNHPEYFIPVSKDEQSQDP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCCCCCH
ESCFEYAAGKYLAHGKDPYFPSWTDTLQLNYANPATREMMRENLLMISSLCDGVRCDVAM
HHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LILKEIFNTTWSNLSGHMEDEFWLEAIAAVKNRFPDFIFLAEAYWNKEWDLQQLGFDFTY
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHCCCCEEE
DMPFYDHLTHAPVNVEKLMGHMQAQWEYQQHLCRFIENHDEPRAAEKIGLNNAVAALVLL
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHH
TAPGMHLIHENQMDGYKKKIPVQLNRQEPEAGDAELHLLYRRLFQLQKKAVFREGNIEWL
HCCCCEEEECCCCCCHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
HLNIIRAAHCFGYHRYRNEEHAFILANFSATGISIAFSHPFLLNKNNNNLTILCTSCRDK
EEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCEEEECCCCEEEEEEECCCCC
TPEILLDGETMHIRLAPHEGVVVTC
CCCEEECCCEEEEEECCCCCEEEEC
>Mature Secondary Structure
MNCSVFSEGVAIFRTELQHPSYQLLMFPLVFEINTRIWLQKLSDQHQKNITLATVPDTEF
CCCCCHHCCHHHHHHHHCCCCCEEEEEEHHHHHCHHHHHHHHHHHHHCCEEEEECCCCCC
TFFSECGFDIVWLMGVWTPSRYSKAIATAHPGLRSSFLSYHDPLDPDTIVSSPYAIPSYT
EEHHHCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEE
VHDKLGGKDELLAFREKLNALGILLMLDFVPNHLALDNDWLPNHPEYFIPVSKDEQSQDP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCCCCCH
ESCFEYAAGKYLAHGKDPYFPSWTDTLQLNYANPATREMMRENLLMISSLCDGVRCDVAM
HHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LILKEIFNTTWSNLSGHMEDEFWLEAIAAVKNRFPDFIFLAEAYWNKEWDLQQLGFDFTY
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHCCCCEEE
DMPFYDHLTHAPVNVEKLMGHMQAQWEYQQHLCRFIENHDEPRAAEKIGLNNAVAALVLL
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHH
TAPGMHLIHENQMDGYKKKIPVQLNRQEPEAGDAELHLLYRRLFQLQKKAVFREGNIEWL
HCCCCEEEECCCCCCHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
HLNIIRAAHCFGYHRYRNEEHAFILANFSATGISIAFSHPFLLNKNNNNLTILCTSCRDK
EEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCEEEECCCCEEEEEEECCCCC
TPEILLDGETMHIRLAPHEGVVVTC
CCCEEECCCEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA