| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356485
Identifier: 119356485
GI number: 119356485
Start: 742563
End: 742838
Strand: Direct
Name: 119356485
Synonym: Cpha266_0650
Alternate gene names: NA
Gene position: 742563-742838 (Clockwise)
Preceding gene: 119356484
Following gene: 119356487
Centisome position: 23.69
GC content: 48.55
Gene sequence:
>276_bases ATGGATGATCTTGAACGATACATTAAGAAGCGGAAAGATGAGTCCCCGGATTTCGCAAAAACTTTTGAACAGGGTTACGA ACAATTCCGGATCGGGGAGTTACTGCGCCAGGCAAGAAAACGTGCAGGCCTGACCCAGGAAGATCTGGCTGAAAAACTGC ACACCAAAAAATCGGCAGTCTCCCGCATCGAGAACCATTCGGAAGACATCCGGCTCTCGACGCTGAGCCATTATGCCGAA GCTCTGGGTAAAAAGCTTACCGTAGTGATTCAATAA
Upstream 100 bases:
>100_bases GTTCTGACCAATGGTTTCTCAAAGAAAACTCAGAAAACCCCGGCATCAGAAATTGTACTCGCTGAAAAGCGGAAAATAGA ATATCTATCGAGGAAAAACC
Downstream 100 bases:
>100_bases TTCTATTCGAGCATGGAGATTTTCCTCTATAGTCTGTGAGAAAAAGGGAGGTTTTCTGAAGATATGGTGTAATTGTTGTT ACTATTTGGGCACTGATTTT
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Xin-Antitoxin System Antitoxin Component Xre Family; Transcriptional Regulator Xre Family
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MDDLERYIKKRKDESPDFAKTFEQGYEQFRIGELLRQARKRAGLTQEDLAEKLHTKKSAVSRIENHSEDIRLSTLSHYAE ALGKKLTVVIQ
Sequences:
>Translated_91_residues MDDLERYIKKRKDESPDFAKTFEQGYEQFRIGELLRQARKRAGLTQEDLAEKLHTKKSAVSRIENHSEDIRLSTLSHYAE ALGKKLTVVIQ >Mature_91_residues MDDLERYIKKRKDESPDFAKTFEQGYEQFRIGELLRQARKRAGLTQEDLAEKLHTKKSAVSRIENHSEDIRLSTLSHYAE ALGKKLTVVIQ
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10605; Mature: 10605
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLERYIKKRKDESPDFAKTFEQGYEQFRIGELLRQARKRAGLTQEDLAEKLHTKKSAV CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SRIENHSEDIRLSTLSHYAEALGKKLTVVIQ HHHHHCHHHHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure MDDLERYIKKRKDESPDFAKTFEQGYEQFRIGELLRQARKRAGLTQEDLAEKLHTKKSAV CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SRIENHSEDIRLSTLSHYAEALGKKLTVVIQ HHHHHCHHHHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA