| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356479
Identifier: 119356479
GI number: 119356479
Start: 737689
End: 738519
Strand: Direct
Name: 119356479
Synonym: Cpha266_0644
Alternate gene names: NA
Gene position: 737689-738519 (Clockwise)
Preceding gene: 119356478
Following gene: 119356480
Centisome position: 23.54
GC content: 48.13
Gene sequence:
>831_bases ATGAATAATGCAGCGCACATCTATATGAAGCAGAAGCATATTTACGGCTTTCTTGCCGGCGTTGTTATCGGAGTTCTTGG TGGTTTGATCGGTTTGGGTGGGGCCGAATTTCGCCTTCCGCTTTTGATAGGTTTGTTTGCCTTTCCTGCTCTTGATGCCG TGATTCTCAATAAAGCAATGAGCCTGGTTGTTGTGACTTCCGCTTTACCGTTTAGAGCAAGTACGGTTTCCTGGCAAGCC ATTGCTGATAATTGGCAAGTGATTCTCAACCTGCTTGCCGGCAGCCTTATTGGAGCCTGGCTCGGAGCTGGCTGGGCAAC TATTCTCCGTTCCGAAGGGCTTTACAAGATCATTGCCTTTCTTCTGCTTGCAATTGCCTGTGTCCTTGCTGGCAGCCATA TGGTGCATGGCTCTGGTAAGCCTTTGCTGGAAAATGTCATTGCTTTGGCAGTAAGCGGGGTACTTGCAGGCTTTATAATT GGTATCGTTGCTGCGCTGCTTGGTGTGGCAGGTGGAGAACTGCTGATTCCAACGCTGGTCATTTTATTTGGTGTCAATAT CAAGTTGGCTGGCAGTCTCTCCCTTGCTATCAGCTTGCCAACCATGTTGGTCAGTTTTGCTCGTTATAGCCGTGACAGCA GCTTTTCTGTTCTCGGTGCCAACCGATCCTTCCTCTTTATTATGGCTGCCGGATCGTTATGCGGTACCTGGATCGGTGGA ATGCTGCTTGGTATTGTTTCTGAGTCTATACTCATCCCGATGCTTGTTTTGCTTCTGATTTTATCAGCAATTAAAGTATG GCGCCATACTTTAATTGGTGGGGCCAGGTGA
Upstream 100 bases:
>100_bases TTTGAAATCCGTTTTATAATGTGAAACAATGATAACATATATATTAATTGATGTTTAAGGAGTCGAGACTTTTTGAAAAT CGACTTTCTGGTAATCTTTC
Downstream 100 bases:
>100_bases ACTTGAAGCTTGTTTTCTCAATAGTGATTGATGTCGATTAGCTCAGATCAGAAAATGTTTAACGTGCTATTTTGCTTTTT ATAAGATTAGTTCTCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MNNAAHIYMKQKHIYGFLAGVVIGVLGGLIGLGGAEFRLPLLIGLFAFPALDAVILNKAMSLVVVTSALPFRASTVSWQA IADNWQVILNLLAGSLIGAWLGAGWATILRSEGLYKIIAFLLLAIACVLAGSHMVHGSGKPLLENVIALAVSGVLAGFII GIVAALLGVAGGELLIPTLVILFGVNIKLAGSLSLAISLPTMLVSFARYSRDSSFSVLGANRSFLFIMAAGSLCGTWIGG MLLGIVSESILIPMLVLLLILSAIKVWRHTLIGGAR
Sequences:
>Translated_276_residues MNNAAHIYMKQKHIYGFLAGVVIGVLGGLIGLGGAEFRLPLLIGLFAFPALDAVILNKAMSLVVVTSALPFRASTVSWQA IADNWQVILNLLAGSLIGAWLGAGWATILRSEGLYKIIAFLLLAIACVLAGSHMVHGSGKPLLENVIALAVSGVLAGFII GIVAALLGVAGGELLIPTLVILFGVNIKLAGSLSLAISLPTMLVSFARYSRDSSFSVLGANRSFLFIMAAGSLCGTWIGG MLLGIVSESILIPMLVLLLILSAIKVWRHTLIGGAR >Mature_276_residues MNNAAHIYMKQKHIYGFLAGVVIGVLGGLIGLGGAEFRLPLLIGLFAFPALDAVILNKAMSLVVVTSALPFRASTVSWQA IADNWQVILNLLAGSLIGAWLGAGWATILRSEGLYKIIAFLLLAIACVLAGSHMVHGSGKPLLENVIALAVSGVLAGFII GIVAALLGVAGGELLIPTLVILFGVNIKLAGSLSLAISLPTMLVSFARYSRDSSFSVLGANRSFLFIMAAGSLCGTWIGG MLLGIVSESILIPMLVLLLILSAIKVWRHTLIGGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28753; Mature: 28753
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNAAHIYMKQKHIYGFLAGVVIGVLGGLIGLGGAEFRLPLLIGLFAFPALDAVILNKAM CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLVVVTSALPFRASTVSWQAIADNWQVILNLLAGSLIGAWLGAGWATILRSEGLYKIIAF HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLLAIACVLAGSHMVHGSGKPLLENVIALAVSGVLAGFIIGIVAALLGVAGGELLIPTLV HHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILFGVNIKLAGSLSLAISLPTMLVSFARYSRDSSFSVLGANRSFLFIMAAGSLCGTWIGG HHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHH MLLGIVSESILIPMLVLLLILSAIKVWRHTLIGGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNNAAHIYMKQKHIYGFLAGVVIGVLGGLIGLGGAEFRLPLLIGLFAFPALDAVILNKAM CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLVVVTSALPFRASTVSWQAIADNWQVILNLLAGSLIGAWLGAGWATILRSEGLYKIIAF HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLLAIACVLAGSHMVHGSGKPLLENVIALAVSGVLAGFIIGIVAALLGVAGGELLIPTLV HHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILFGVNIKLAGSLSLAISLPTMLVSFARYSRDSSFSVLGANRSFLFIMAAGSLCGTWIGG HHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHH MLLGIVSESILIPMLVLLLILSAIKVWRHTLIGGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA