| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356470
Identifier: 119356470
GI number: 119356470
Start: 719415
End: 722333
Strand: Direct
Name: 119356470
Synonym: Cpha266_0635
Alternate gene names: NA
Gene position: 719415-722333 (Clockwise)
Preceding gene: 119356469
Following gene: 119356471
Centisome position: 22.96
GC content: 48.99
Gene sequence:
>2919_bases ATGATATCAGACTATCCAATAAAATCACCCCGCAAGCTTATTGAGGTTGCGCTTCCGCTGGATGCTATCAATGCAGCTTG TGCCTATGAGAAAATGCCAGGGATAGGTGCTCATCCACGCGGAATCCATCTTTGGTGGGCAAGGCGACCTCTTGCAGCCG CACGAGCGGTTCTGTTTGCGCAACTTGTCAACGACCCTGGTTACCAACAGGGTTGTGGTTTCAAATATGGCAAGAATAAA AAGGAAGCTGCTATTGAACGAAAGCGACTGTTCAAGATTATCGAAGAGCTTGTATTGTGGGAAAATACCACCAACGAGGA AGTTCTGGAACGCGCCAGGGTTGAGATTCGCCGATCCTGGCGGGAGGTGTGCGAACTGAATAAAGAGCATCCGCAGGCTG CCGAGTTGTTCAACCCGGAAAAGATGCCTGCGTTTCATGACCCTTTTGCTGGTGGTGGAGCTATTCCACTTGAAGCACAG CGATTGGGACTCGAAGCCTACGCCTCCGATCTGAATCCAGTTGCAGTGCTGATTAACAAAGCAATGATTGAGATTCCGCC CAAGTTCGCTGGACGACCTCCGGTCGGACCAGAGATTGAGAACAAACAGGGCAAAAGTCTCGAACTTCCAAAAATTTGGC CGGGAGCTACCGGACTGGCAGAGGATGTTCGCCGCTATGGGTCGTGGATGCGTGATGAAGCACAAAAACGTATTGGACAC CTTTATCCACCTGTTGAAGTCACTGAGGAGATGGCGAGGGAACGGTCTGACCTCAAACCGCTTGTTGGCAAGAAACTTAC CGTCATTGCATGGTTGTGGACAAGAACTGTCAAAAGTCCGAATCCTGCTTTTACCCATGTAAACGTTCCACTTGTTTCGT CCTATATATTGGCAAATAAAGATGGTAAAGAAGTATACGTAAAGCCAGTTATCGAGGGTGATAAGTATTATTTTTTGATT AAAAATGGTACTCCAACAACTGAAGCTAAAGATGGGACAAAAGCAACTGTGCGAGGGGCAAACTTCAGATGTATAGTTTC AGGCGCTGTAATTGGAAGCGACTATATAAAAACAGAAGGTAAAGCGGGAAGAATCGGCCAAAGACTCATGGCTATTGTTG CCGAGGGTACCCGAGGCCGGGTTTATCTCCCCCCAACATTGGATGCGGAAACTGTTGCAAAAGATGCTGCTCCAACGTGG CGTCCATCCGGTGATGTACCAGAGAGATTGACAGGTGGGACTTGTGTTCCTTATGGATTGAAAGAATGGGGAGATATTTT TACTCCTCGGCAGTTGGTCGCATTGACAATATTAAGCGATTTACTTTCTGAAGTGCGTGAACTTGTCAGAGAAGATGCTT TAGCTTCTGGCTTATCTGACAGCGAAAAAGGACTTGGTGATGGAGGCTCTGGTGTGATTGCTTATGCGGAAGCAGTTAGC GTGTATCTTGCTTTTGCCATCAATCGCTGTGCGGATTTTTGTAATTCAGTTACACGATGGGTTCCAGGAAATCAGAAGGT GATGAATCTTTTTGGGAAACAAGCCATTCCTATGACATGGGATTATCCAGAAGCTGCTATTCTTGCTGATACGGTCGGTG GCTTTGCTCCCGCTTCGAAATACGTTGCTGATTGCATTGGGAAGTTGTCTCCTGCCGCTGTCGGTTTTGCCTCTCAAGCT GATGCGCAAACACAGAGTATTTCCATGGCTAAAATAATTTCAACTGATCCACCCTATTATGACAACATTGCCTATGCTGA TCTTTCTGATTTTTTTTACGTGTGGCTGAGGAAATCCTTGCGTCTATTTCTTCCAGGCTTGTTTTCCACAATTACAGTCC CTAAGGTTGAAGAACTCGTAGCGGCTCCTTATCGTCATGGCACAAAACAGAAAGCTGAAACGTTTTTTCTTACGGGCATG ACTGAGGCCATCCATAATCTTGCCGAACAAGCACATCCCGAGGGCCCGGTTACAATTTACTACGCATTTAAGCAGTCGGA GACAAGTGGACAAGATGGCACATCTTCTCCAGGATGGGTAACGTTTTTGTCGGCAGTGTTAAGTGCCGGTTTTGCTATTG TTGGTACATGGCCGTTACGCAGCGAACAGGAATTCCGGATGATTGGCATGGGAGCAAATGCCCTTGCATCCAGCATCGTC CTTGTTTGCCGCAAACGTTCTGCTGACGCTCCCTCCGTTTCCCGCCGTGAGTTCATTCGCGAGTTGAACGGCGTATTGCC CGAGGCACTTGACGAAATGACCAAAGGTTCCGGCGAGGAACGTTCGCCCGTTGCTCCGGTGGATTTGTCGCAGGCTATCA TTGGCCCCGGCATGGCGGTTTTTTCCAAATACTCAGCAGTGCTGGAAGCAGACGGCACACCGATGAGCGTCAGAACGGCT CTCCAGCTCATCAACCGTTTTCTTGCCGAGGATGATTTCGATCCAGATACCCAGTTCTGCCTTCACTGGTTTGAGCAATA CGGATGGAATGAAAACCTTTTCGGTGAAGCTGATGTATTAGCCCGCTCAAAATCGACAAGTGTTGACGCCATGAAGGAGG CCGGTGTGCTCCAGAGTGGCAGCGGCAAAGTCCGTCTGCTCAAATGGGCGGAGTATCCCAGCGATTGGGATCCGCGTACT GACAAGCGAATGCCTGTATGGGAAGCACTGCACCAGCTTATCCGCGCATTGAAGCAAGGAGGCGAATCTGCATCCGGAGC ACTTCTTGCTGCTCTCGGCGGCAAAGCTGAAGCGGTACGTCAACTCGCATACCGCCTCTATACGCTCTGCGAACGACTCG GCCAGGCCGAAGATGCACGAGCCTATAACGAACTGATCACAAGCTGGACAGGTATCGAATCTGTTGCCAACAGCATACCA AAACCGTCCGATCCGCAACTGTCACTTTTTGATAACTGA
Upstream 100 bases:
>100_bases CCGGATTGATTGAAATGACCATTCCGGATAAACCACGAAGCAGCCTGCAAAAGTACAGAATAACTGAAAAAGGTAGAACC TGGCTTACAGAAATAAAGGA
Downstream 100 bases:
>100_bases AGGATATAACTCATGAGCCTGAAACCCTGGCGTGAAATCATTATACCTCACTCGGATGTGCTGAATGGCATCTTTCAGCA ATCCGAGTTTGCCGCAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Methylase Containing A Zn-Ribbon Module; DNA Methylase; Adenine-Specific DNA Methylase Containing A Zn-Ribbon
Number of amino acids: Translated: 972; Mature: 972
Protein sequence:
>972_residues MISDYPIKSPRKLIEVALPLDAINAACAYEKMPGIGAHPRGIHLWWARRPLAAARAVLFAQLVNDPGYQQGCGFKYGKNK KEAAIERKRLFKIIEELVLWENTTNEEVLERARVEIRRSWREVCELNKEHPQAAELFNPEKMPAFHDPFAGGGAIPLEAQ RLGLEAYASDLNPVAVLINKAMIEIPPKFAGRPPVGPEIENKQGKSLELPKIWPGATGLAEDVRRYGSWMRDEAQKRIGH LYPPVEVTEEMARERSDLKPLVGKKLTVIAWLWTRTVKSPNPAFTHVNVPLVSSYILANKDGKEVYVKPVIEGDKYYFLI KNGTPTTEAKDGTKATVRGANFRCIVSGAVIGSDYIKTEGKAGRIGQRLMAIVAEGTRGRVYLPPTLDAETVAKDAAPTW RPSGDVPERLTGGTCVPYGLKEWGDIFTPRQLVALTILSDLLSEVRELVREDALASGLSDSEKGLGDGGSGVIAYAEAVS VYLAFAINRCADFCNSVTRWVPGNQKVMNLFGKQAIPMTWDYPEAAILADTVGGFAPASKYVADCIGKLSPAAVGFASQA DAQTQSISMAKIISTDPPYYDNIAYADLSDFFYVWLRKSLRLFLPGLFSTITVPKVEELVAAPYRHGTKQKAETFFLTGM TEAIHNLAEQAHPEGPVTIYYAFKQSETSGQDGTSSPGWVTFLSAVLSAGFAIVGTWPLRSEQEFRMIGMGANALASSIV LVCRKRSADAPSVSRREFIRELNGVLPEALDEMTKGSGEERSPVAPVDLSQAIIGPGMAVFSKYSAVLEADGTPMSVRTA LQLINRFLAEDDFDPDTQFCLHWFEQYGWNENLFGEADVLARSKSTSVDAMKEAGVLQSGSGKVRLLKWAEYPSDWDPRT DKRMPVWEALHQLIRALKQGGESASGALLAALGGKAEAVRQLAYRLYTLCERLGQAEDARAYNELITSWTGIESVANSIP KPSDPQLSLFDN
Sequences:
>Translated_972_residues MISDYPIKSPRKLIEVALPLDAINAACAYEKMPGIGAHPRGIHLWWARRPLAAARAVLFAQLVNDPGYQQGCGFKYGKNK KEAAIERKRLFKIIEELVLWENTTNEEVLERARVEIRRSWREVCELNKEHPQAAELFNPEKMPAFHDPFAGGGAIPLEAQ RLGLEAYASDLNPVAVLINKAMIEIPPKFAGRPPVGPEIENKQGKSLELPKIWPGATGLAEDVRRYGSWMRDEAQKRIGH LYPPVEVTEEMARERSDLKPLVGKKLTVIAWLWTRTVKSPNPAFTHVNVPLVSSYILANKDGKEVYVKPVIEGDKYYFLI KNGTPTTEAKDGTKATVRGANFRCIVSGAVIGSDYIKTEGKAGRIGQRLMAIVAEGTRGRVYLPPTLDAETVAKDAAPTW RPSGDVPERLTGGTCVPYGLKEWGDIFTPRQLVALTILSDLLSEVRELVREDALASGLSDSEKGLGDGGSGVIAYAEAVS VYLAFAINRCADFCNSVTRWVPGNQKVMNLFGKQAIPMTWDYPEAAILADTVGGFAPASKYVADCIGKLSPAAVGFASQA DAQTQSISMAKIISTDPPYYDNIAYADLSDFFYVWLRKSLRLFLPGLFSTITVPKVEELVAAPYRHGTKQKAETFFLTGM TEAIHNLAEQAHPEGPVTIYYAFKQSETSGQDGTSSPGWVTFLSAVLSAGFAIVGTWPLRSEQEFRMIGMGANALASSIV LVCRKRSADAPSVSRREFIRELNGVLPEALDEMTKGSGEERSPVAPVDLSQAIIGPGMAVFSKYSAVLEADGTPMSVRTA LQLINRFLAEDDFDPDTQFCLHWFEQYGWNENLFGEADVLARSKSTSVDAMKEAGVLQSGSGKVRLLKWAEYPSDWDPRT DKRMPVWEALHQLIRALKQGGESASGALLAALGGKAEAVRQLAYRLYTLCERLGQAEDARAYNELITSWTGIESVANSIP KPSDPQLSLFDN >Mature_972_residues MISDYPIKSPRKLIEVALPLDAINAACAYEKMPGIGAHPRGIHLWWARRPLAAARAVLFAQLVNDPGYQQGCGFKYGKNK KEAAIERKRLFKIIEELVLWENTTNEEVLERARVEIRRSWREVCELNKEHPQAAELFNPEKMPAFHDPFAGGGAIPLEAQ RLGLEAYASDLNPVAVLINKAMIEIPPKFAGRPPVGPEIENKQGKSLELPKIWPGATGLAEDVRRYGSWMRDEAQKRIGH LYPPVEVTEEMARERSDLKPLVGKKLTVIAWLWTRTVKSPNPAFTHVNVPLVSSYILANKDGKEVYVKPVIEGDKYYFLI KNGTPTTEAKDGTKATVRGANFRCIVSGAVIGSDYIKTEGKAGRIGQRLMAIVAEGTRGRVYLPPTLDAETVAKDAAPTW RPSGDVPERLTGGTCVPYGLKEWGDIFTPRQLVALTILSDLLSEVRELVREDALASGLSDSEKGLGDGGSGVIAYAEAVS VYLAFAINRCADFCNSVTRWVPGNQKVMNLFGKQAIPMTWDYPEAAILADTVGGFAPASKYVADCIGKLSPAAVGFASQA DAQTQSISMAKIISTDPPYYDNIAYADLSDFFYVWLRKSLRLFLPGLFSTITVPKVEELVAAPYRHGTKQKAETFFLTGM TEAIHNLAEQAHPEGPVTIYYAFKQSETSGQDGTSSPGWVTFLSAVLSAGFAIVGTWPLRSEQEFRMIGMGANALASSIV LVCRKRSADAPSVSRREFIRELNGVLPEALDEMTKGSGEERSPVAPVDLSQAIIGPGMAVFSKYSAVLEADGTPMSVRTA LQLINRFLAEDDFDPDTQFCLHWFEQYGWNENLFGEADVLARSKSTSVDAMKEAGVLQSGSGKVRLLKWAEYPSDWDPRT DKRMPVWEALHQLIRALKQGGESASGALLAALGGKAEAVRQLAYRLYTLCERLGQAEDARAYNELITSWTGIESVANSIP KPSDPQLSLFDN
Specific function: Unknown
COG id: COG1743
COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106648; Mature: 106648
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISDYPIKSPRKLIEVALPLDAINAACAYEKMPGIGAHPRGIHLWWARRPLAAARAVLFA CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHH QLVNDPGYQQGCGFKYGKNKKEAAIERKRLFKIIEELVLWENTTNEEVLERARVEIRRSW HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH REVCELNKEHPQAAELFNPEKMPAFHDPFAGGGAIPLEAQRLGLEAYASDLNPVAVLINK HHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH AMIEIPPKFAGRPPVGPEIENKQGKSLELPKIWPGATGLAEDVRRYGSWMRDEAQKRIGH HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC LYPPVEVTEEMARERSDLKPLVGKKLTVIAWLWTRTVKSPNPAFTHVNVPLVSSYILANK CCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCC DGKEVYVKPVIEGDKYYFLIKNGTPTTEAKDGTKATVRGANFRCIVSGAVIGSDYIKTEG CCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCEECCHHHHCCC KAGRIGQRLMAIVAEGTRGRVYLPPTLDAETVAKDAAPTWRPSGDVPERLTGGTCVPYGL CCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCH KEWGDIFTPRQLVALTILSDLLSEVRELVREDALASGLSDSEKGLGDGGSGVIAYAEAVS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH VYLAFAINRCADFCNSVTRWVPGNQKVMNLFGKQAIPMTWDYPEAAILADTVGGFAPASK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHH YVADCIGKLSPAAVGFASQADAQTQSISMAKIISTDPPYYDNIAYADLSDFFYVWLRKSL HHHHHHHCCCHHHHCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH RLFLPGLFSTITVPKVEELVAAPYRHGTKQKAETFFLTGMTEAIHNLAEQAHPEGPVTIY HHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHEEEEHHHHHHHHHHHHHHCCCCCEEEE YAFKQSETSGQDGTSSPGWVTFLSAVLSAGFAIVGTWPLRSEQEFRMIGMGANALASSIV EEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCHHHHHHHHH LVCRKRSADAPSVSRREFIRELNGVLPEALDEMTKGSGEERSPVAPVDLSQAIIGPGMAV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHH FSKYSAVLEADGTPMSVRTALQLINRFLAEDDFDPDTQFCLHWFEQYGWNENLFGEADVL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH ARSKSTSVDAMKEAGVLQSGSGKVRLLKWAEYPSDWDPRTDKRMPVWEALHQLIRALKQG HCCCCCCHHHHHHCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GESASGALLAALGGKAEAVRQLAYRLYTLCERLGQAEDARAYNELITSWTGIESVANSIP CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC KPSDPQLSLFDN CCCCCCEECCCC >Mature Secondary Structure MISDYPIKSPRKLIEVALPLDAINAACAYEKMPGIGAHPRGIHLWWARRPLAAARAVLFA CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHH QLVNDPGYQQGCGFKYGKNKKEAAIERKRLFKIIEELVLWENTTNEEVLERARVEIRRSW HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH REVCELNKEHPQAAELFNPEKMPAFHDPFAGGGAIPLEAQRLGLEAYASDLNPVAVLINK HHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH AMIEIPPKFAGRPPVGPEIENKQGKSLELPKIWPGATGLAEDVRRYGSWMRDEAQKRIGH HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC LYPPVEVTEEMARERSDLKPLVGKKLTVIAWLWTRTVKSPNPAFTHVNVPLVSSYILANK CCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCC DGKEVYVKPVIEGDKYYFLIKNGTPTTEAKDGTKATVRGANFRCIVSGAVIGSDYIKTEG CCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCEECCHHHHCCC KAGRIGQRLMAIVAEGTRGRVYLPPTLDAETVAKDAAPTWRPSGDVPERLTGGTCVPYGL CCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCH KEWGDIFTPRQLVALTILSDLLSEVRELVREDALASGLSDSEKGLGDGGSGVIAYAEAVS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH VYLAFAINRCADFCNSVTRWVPGNQKVMNLFGKQAIPMTWDYPEAAILADTVGGFAPASK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHH YVADCIGKLSPAAVGFASQADAQTQSISMAKIISTDPPYYDNIAYADLSDFFYVWLRKSL HHHHHHHCCCHHHHCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH RLFLPGLFSTITVPKVEELVAAPYRHGTKQKAETFFLTGMTEAIHNLAEQAHPEGPVTIY HHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHEEEEHHHHHHHHHHHHHHCCCCCEEEE YAFKQSETSGQDGTSSPGWVTFLSAVLSAGFAIVGTWPLRSEQEFRMIGMGANALASSIV EEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCHHHHHHHHH LVCRKRSADAPSVSRREFIRELNGVLPEALDEMTKGSGEERSPVAPVDLSQAIIGPGMAV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHH FSKYSAVLEADGTPMSVRTALQLINRFLAEDDFDPDTQFCLHWFEQYGWNENLFGEADVL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH ARSKSTSVDAMKEAGVLQSGSGKVRLLKWAEYPSDWDPRTDKRMPVWEALHQLIRALKQG HCCCCCCHHHHHHCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GESASGALLAALGGKAEAVRQLAYRLYTLCERLGQAEDARAYNELITSWTGIESVANSIP CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC KPSDPQLSLFDN CCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA