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The map label for this gene is ybjY [C]

Identifier: 119356456

GI number: 119356456

Start: 696754

End: 697689

Strand: Direct

Name: ybjY [C]

Synonym: Cpha266_0621

Alternate gene names: 119356456

Gene position: 696754-697689 (Clockwise)

Preceding gene: 119356455

Following gene: 119356457

Centisome position: 22.23

GC content: 46.9

Gene sequence:

>936_bases
ATGGTTATGCTCGCCGTTTTCGGGGTGGGAGGGTTTATTTATTTCAATGCAAACAAGAGCACGACGAAAAGTTATGAAGA
GCTCCGTGTATCAAGAGGTACCATCAGTTCATCCGTATCGACAACCGGAGCGGTAGAGCCGAAAACCCGTGTTAAAATAC
AGTCATCTGTCGCAGGCAGAATTGAGGAAATTCTTGTTGCGGAAGGGGAGTATGTAACGAGAGGAGCGGTTCTTGCCATG
CTGAGTTCGACCGAACGAGCCGCCTTGCTTGATGCTGCAAAGTTACAGGGAAAAAGCGAACAGGCTTACTGGAACAACGT
GTATAAAAAGACAGCAGTCATAGCTCCGATGGATGGGCAGGTTATCGTAAGCAGTGTTGACCCTGGTCAGACGGTGACTA
CAAGTGATTCTCTTTTTGTCCTATCCGACAGGCTTATTGTCAAGGCCTATGTTGATGAAACAGATATAGGAAGGGTTAAG
GTTGGCCAGAAGGCAGTGATTGGTCTTGATGCCTATCCCGATATTCGGGTGAACGGGGTAGTTGGACATATCTACTATGA
GTCACATCTGCAGAATAATGTCAATATCTATAATGTCGATGTTCTCCCTGAGCGTATTCCCGATGTTTTCCGATCCGGTA
TGAGTGCTAATATTGAAATTATTGTTCAGCAAAAGAGCAATGTTCTGCTTTTGCCGGTCGGCGCAGTGCAGACGAGAAAT
GGCAAAACGGTGGTTATGCAGAGTAACGGCAACAAACAGGATGCGGTTCGATATACGGCTGTAGAGACCGGTTTGCAGGA
TGAACGTCATGTCGAGATTCTCAAAGGCTTGTCGGAAAACGCTGTTGTACTGATTGCCGATACATCCTTTGTTCTGCCGG
GAAAAAAGGGTGGGACAAATCCGTTTATGCCTCAGCGCAACAGGACGCAGAAATGA

Upstream 100 bases:

>100_bases
CTCAATGCCGGAGCAGATATGCTGATTGCCGAGGCTCAATGGATTCAGGCAAAAGGAGAAGGATTTGATGGTTAACAGGA
AAAAGATGGTATGGGGAGTT

Downstream 100 bases:

>100_bases
ATCCATTGCTTGAACTTCTTGATGTTCACCGGACGTATCAGATAGGTGAAACCACCGTTAATGCGTTGCGTGGTGTTTCC
CTGACCATAGATCGAGGAGA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Membrane-Fusion Protein; Membrane Fusion Protein; Periplasmic Component Of Efflux System; Efflux Transporter Rnd Family Mfp Subunit; Macrolide-Specific Efflux Protein; Biotin/Lipoyl Attachment Domain-Containing Protein; Secretion Protein HlyD Family Protein; Acriflavin Resistance Periplasmic Protein; Permease; ABC-Type Macrolide Exporter Membrane Component; Macrolide-Specific ABC-Type Efflux Protein; Transmembrane Efflux Protein; Membrane Permease Cation Efflux Pumps; Protein Secretion Protein HylD Family; AcrA/AcrE Family Protein; Efflux Transporter; RND Efflux Transporter; PAS/PAC Sensor Protein

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MVMLAVFGVGGFIYFNANKSTTKSYEELRVSRGTISSSVSTTGAVEPKTRVKIQSSVAGRIEEILVAEGEYVTRGAVLAM
LSSTERAALLDAAKLQGKSEQAYWNNVYKKTAVIAPMDGQVIVSSVDPGQTVTTSDSLFVLSDRLIVKAYVDETDIGRVK
VGQKAVIGLDAYPDIRVNGVVGHIYYESHLQNNVNIYNVDVLPERIPDVFRSGMSANIEIIVQQKSNVLLLPVGAVQTRN
GKTVVMQSNGNKQDAVRYTAVETGLQDERHVEILKGLSENAVVLIADTSFVLPGKKGGTNPFMPQRNRTQK

Sequences:

>Translated_311_residues
MVMLAVFGVGGFIYFNANKSTTKSYEELRVSRGTISSSVSTTGAVEPKTRVKIQSSVAGRIEEILVAEGEYVTRGAVLAM
LSSTERAALLDAAKLQGKSEQAYWNNVYKKTAVIAPMDGQVIVSSVDPGQTVTTSDSLFVLSDRLIVKAYVDETDIGRVK
VGQKAVIGLDAYPDIRVNGVVGHIYYESHLQNNVNIYNVDVLPERIPDVFRSGMSANIEIIVQQKSNVLLLPVGAVQTRN
GKTVVMQSNGNKQDAVRYTAVETGLQDERHVEILKGLSENAVVLIADTSFVLPGKKGGTNPFMPQRNRTQK
>Mature_311_residues
MVMLAVFGVGGFIYFNANKSTTKSYEELRVSRGTISSSVSTTGAVEPKTRVKIQSSVAGRIEEILVAEGEYVTRGAVLAM
LSSTERAALLDAAKLQGKSEQAYWNNVYKKTAVIAPMDGQVIVSSVDPGQTVTTSDSLFVLSDRLIVKAYVDETDIGRVK
VGQKAVIGLDAYPDIRVNGVVGHIYYESHLQNNVNIYNVDVLPERIPDVFRSGMSANIEIIVQQKSNVLLLPVGAVQTRN
GKTVVMQSNGNKQDAVRYTAVETGLQDERHVEILKGLSENAVVLIADTSFVLPGKKGGTNPFMPQRNRTQK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33781; Mature: 33781

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMLAVFGVGGFIYFNANKSTTKSYEELRVSRGTISSSVSTTGAVEPKTRVKIQSSVAGR
CEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHH
IEEILVAEGEYVTRGAVLAMLSSTERAALLDAAKLQGKSEQAYWNNVYKKTAVIAPMDGQ
HHHHEEECCCEEECHHEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCC
VIVSSVDPGQTVTTSDSLFVLSDRLIVKAYVDETDIGRVKVGQKAVIGLDAYPDIRVNGV
EEEEECCCCCEEECCCCEEEEECCEEEEEECCCCCCCEEEECCEEEEEECCCCCEEEEEE
VGHIYYESHLQNNVNIYNVDVLPERIPDVFRSGMSANIEIIVQQKSNVLLLPVGAVQTRN
EEEEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCEEECC
GKTVVMQSNGNKQDAVRYTAVETGLQDERHVEILKGLSENAVVLIADTSFVLPGKKGGTN
CCEEEEECCCCCCHHEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCC
PFMPQRNRTQK
CCCCCCCCCCC
>Mature Secondary Structure
MVMLAVFGVGGFIYFNANKSTTKSYEELRVSRGTISSSVSTTGAVEPKTRVKIQSSVAGR
CEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHH
IEEILVAEGEYVTRGAVLAMLSSTERAALLDAAKLQGKSEQAYWNNVYKKTAVIAPMDGQ
HHHHEEECCCEEECHHEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCC
VIVSSVDPGQTVTTSDSLFVLSDRLIVKAYVDETDIGRVKVGQKAVIGLDAYPDIRVNGV
EEEEECCCCCEEECCCCEEEEECCEEEEEECCCCCCCEEEECCEEEEEECCCCCEEEEEE
VGHIYYESHLQNNVNIYNVDVLPERIPDVFRSGMSANIEIIVQQKSNVLLLPVGAVQTRN
EEEEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCEEECC
GKTVVMQSNGNKQDAVRYTAVETGLQDERHVEILKGLSENAVVLIADTSFVLPGKKGGTN
CCEEEEECCCCCCHHEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCC
PFMPQRNRTQK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA