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The map label for this gene is yebC [C]

Identifier: 119356375

GI number: 119356375

Start: 593014

End: 593766

Strand: Direct

Name: yebC [C]

Synonym: Cpha266_0538

Alternate gene names: 119356375

Gene position: 593014-593766 (Clockwise)

Preceding gene: 119356368

Following gene: 119356376

Centisome position: 18.92

GC content: 44.22

Gene sequence:

>753_bases
ATGTCAGGACACAGTAAATGGGCTACCATTAAGAGGAAAAAAGCAGCAACCGATCAGAAGAGAGGTAATCTTTTTACCAA
ACTGGTCAAGGAAATTACCATAGCCGCTAAAATGGGCGGGGCTGATCCTGGCGGAAATCCGCGATTGCGTCTGGCGATTG
ATACTGCTCGATCGAATTCTATGCCGATGGAGAACATTCTGCGGGCTGTTAAAAAAGGAACGGGTGAACTGGAAGGCGTA
ACCTATGATGAAATAACCTATGAGGGTTATGGTCCGGCCGGCATTGCGCTGATCATTGAAACTGCGACGGATAACAGAAA
CCGTACGGTTGCCGATATTCGTCATATCATGAGCAGGAACAATGGTTCACTTGGAGAGAGTGGCAGCGTGAGCTGGATGT
TTCATCGCAAAGGGAGCCTTGATGTCTCGAAAAGTGCAGTAAGCGAGGATATGCTTCTGGAGATTCTTCTTGACGCAGGT
CTTGAAGATCTCGAGAGTGATGATGCAATCTATTATACCGTTATCACTGATTTGAAGGATCTTGAAACGGTAAAAAAGGC
TCTTGATGCTGCCGCAATTCCTTTTGAAAATGCACGGATTGATATGATTCCTGAAAATTATATCGAACTTGAAGCTGAAG
ATGCCTCAAAAGTTATCAGGATTATTGATGCCCTTGAAAATAACGATGATGTTCAGGCCGTATACAGTAACATGGAGATC
AGCGAAAAAGCCATGAACAGTTTAAATGAGTAG

Upstream 100 bases:

>100_bases
CTTGCAATATTGCAGTTGGATTTGATTTTATTTAAAGAAAATAAATCTATTATCACAATCAGGACTTTTTCAGACAATAC
TCAATCAGTAAAATTTTATC

Downstream 100 bases:

>100_bases
CTAATGGTTGTGCTTGGGGTTGATCCGGGAAGCCTGAAAACCGGCTATGGAGTTGTGAGACAGGACAGTTCAGGATTTTC
AGTGCTGACCTGCGGCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGADPGGNPRLRLAIDTARSNSMPMENILRAVKKGTGELEGV
TYDEITYEGYGPAGIALIIETATDNRNRTVADIRHIMSRNNGSLGESGSVSWMFHRKGSLDVSKSAVSEDMLLEILLDAG
LEDLESDDAIYYTVITDLKDLETVKKALDAAAIPFENARIDMIPENYIELEAEDASKVIRIIDALENNDDVQAVYSNMEI
SEKAMNSLNE

Sequences:

>Translated_250_residues
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGADPGGNPRLRLAIDTARSNSMPMENILRAVKKGTGELEGV
TYDEITYEGYGPAGIALIIETATDNRNRTVADIRHIMSRNNGSLGESGSVSWMFHRKGSLDVSKSAVSEDMLLEILLDAG
LEDLESDDAIYYTVITDLKDLETVKKALDAAAIPFENARIDMIPENYIELEAEDASKVIRIIDALENNDDVQAVYSNMEI
SEKAMNSLNE
>Mature_249_residues
SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGADPGGNPRLRLAIDTARSNSMPMENILRAVKKGTGELEGVT
YDEITYEGYGPAGIALIIETATDNRNRTVADIRHIMSRNNGSLGESGSVSWMFHRKGSLDVSKSAVSEDMLLEILLDAGL
EDLESDDAIYYTVITDLKDLETVKKALDAAAIPFENARIDMIPENYIELEAEDASKVIRIIDALENNDDVQAVYSNMEIS
EKAMNSLNE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=32.3886639676113, Blast_Score=129, Evalue=2e-30,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=45.1612903225806, Blast_Score=227, Evalue=6e-61,
Organism=Escherichia coli, GI1788294, Length=239, Percent_Identity=37.6569037656904, Blast_Score=134, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=25, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=30.0751879699248, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=27.3092369477912, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y538_CHLPD (A1BDW8)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_911019.1
- ProteinModelPortal:   A1BDW8
- SMR:   A1BDW8
- STRING:   A1BDW8
- GeneID:   4569075
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_0538
- NMPDR:   fig|290317.7.peg.562
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27456; Mature: 27325

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGADPGGNPRLRLAIDTARSNS
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCC
MPMENILRAVKKGTGELEGVTYDEITYEGYGPAGIALIIETATDNRNRTVADIRHIMSRN
CCHHHHHHHHHCCCCCCCCCEECCEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCC
NGSLGESGSVSWMFHRKGSLDVSKSAVSEDMLLEILLDAGLEDLESDDAIYYTVITDLKD
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCHHH
LETVKKALDAAAIPFENARIDMIPENYIELEAEDASKVIRIIDALENNDDVQAVYSNMEI
HHHHHHHHHHHCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHCCCH
SEKAMNSLNE
HHHHHHHCCC
>Mature Secondary Structure 
SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGADPGGNPRLRLAIDTARSNS
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCC
MPMENILRAVKKGTGELEGVTYDEITYEGYGPAGIALIIETATDNRNRTVADIRHIMSRN
CCHHHHHHHHHCCCCCCCCCEECCEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCC
NGSLGESGSVSWMFHRKGSLDVSKSAVSEDMLLEILLDAGLEDLESDDAIYYTVITDLKD
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCHHH
LETVKKALDAAAIPFENARIDMIPENYIELEAEDASKVIRIIDALENNDDVQAVYSNMEI
HHHHHHHHHHHCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHCCCH
SEKAMNSLNE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA