Click here to switch to the map view.

The map label for this gene is 119356343

Identifier: 119356343

GI number: 119356343

Start: 556504

End: 557556

Strand: Reverse

Name: 119356343

Synonym: Cpha266_0506

Alternate gene names: NA

Gene position: 557556-556504 (Counterclockwise)

Preceding gene: 119356344

Following gene: 119356342

Centisome position: 17.79

GC content: 51.19

Gene sequence:

>1053_bases
ATGGACAACGACCATAAACATGCCATGAACGGAACAAACCAATCAAGAGCGACTATCCTTGCCGAACAGAACTACCCGCT
GCACATCGCGCTATTTCTGCTTACGGCACTCTGCACCCTCTGGGCAGGCAGCTTCTGGAGCGGCCATCCCGTTCGTCTTG
ACAACGTCAACCTGTTTTTTTTCGATCTTTTCCGGGGCCTCCCCTATGCGGCCTCTCTTCTCCTCTTTTTAAGCGTCCAT
GAGTTTGGCCATTTTTTCACTGCGCTTCACTACCGTATGCGCGCAACACTGCCATACTACATTCCTGTCCCGCCCCTGCC
GTTTCTGCTGAGTCTGGGAACAATGGGAGCGGTCATTAAAATCAAAGACAGGATTCCCAACACCAACGCCCTTTTTGATA
CCGGTGTTTCAGGACCGCTCAGTGGATTTATCGTCAGTCTCGGGCTTTTGCTCTTTGGTTTTTACCATCTGCCTCCGGCT
TCATGGATTTTTACCGTTCACCCTGAGTACATTGCTTCCGGAGGCATCCCGAATCCGGCTCCCGAAGGTACGCTCACCCT
GGGGAAAAATCTGCTCTGGATAGTTCTGGAACAAGTTATCGCGCCAAAAAACCTGCCCCCCATGACCGAAATGTACCACT
ATCCATTCCTCTTTACCGGGTGGCTCGGCTGCTTTGTTACCGCGCTCAACCTCATACCTGTCGGACAGCTCGATGGCGGT
CATGTGACCTACGCCATGTTCGGAAAACAGGGCTATAAAAAAACCGCAAAAACTTTCATGTTTATCATTGGCATTCTCGG
GTTCCCATCACTTCTTGAACTTACGTTTTCACTGATCTTGCCTGCACAGACGATCCGTATCCCCGGGGAACTGCTCCAAT
GGTCATGGCCGGGGTGGATGCTCTGGTTTTTAATTCTCTCGCGGTTTATCGGCACAGACCATCCTCCAACCAGTCATGAT
TGCTCCCTTTCAGCTTCACGCCGGGCAATCGGCTGGGTTGCTATCGTCATTTTTATCATAACGTTCGTACCGGTACCATT
CGGCGTACAATGA

Upstream 100 bases:

>100_bases
TTTCCGGATTCAGAACCATCTTCGTCCCGAAAGAACGTCCAATCCCTTTCGTTTTATTTTTTTTCAGGAAAAAACATATA
CCTTATCACGAACCCGCACG

Downstream 100 bases:

>100_bases
AAAGTGTAACCGACAAGCCGGATCAATACCTGATCAACTGCTCAGGCGTCACGCTTGATCTCCGTAAAGCGCCTGTTGTC
ATGGGCATCGTCAACGTTAC

Product: peptidase M50

Products: NA

Alternate protein names: Peptidase; Membrane-Associated Zn-Dependent Protease; M50 Family Peptidase; Metalloprotease; Zinc Protease; Membrane-Associated Metallopeptidase; Zinc Metalloprotease; M50 Family Metallopeptidase; M50B Family Peptidase; Peptidase Family; Membrane Associated Metalloprotease; S2P Family Metalloprotease; Integral Membrane Protease

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MDNDHKHAMNGTNQSRATILAEQNYPLHIALFLLTALCTLWAGSFWSGHPVRLDNVNLFFFDLFRGLPYAASLLLFLSVH
EFGHFFTALHYRMRATLPYYIPVPPLPFLLSLGTMGAVIKIKDRIPNTNALFDTGVSGPLSGFIVSLGLLLFGFYHLPPA
SWIFTVHPEYIASGGIPNPAPEGTLTLGKNLLWIVLEQVIAPKNLPPMTEMYHYPFLFTGWLGCFVTALNLIPVGQLDGG
HVTYAMFGKQGYKKTAKTFMFIIGILGFPSLLELTFSLILPAQTIRIPGELLQWSWPGWMLWFLILSRFIGTDHPPTSHD
CSLSASRRAIGWVAIVIFIITFVPVPFGVQ

Sequences:

>Translated_350_residues
MDNDHKHAMNGTNQSRATILAEQNYPLHIALFLLTALCTLWAGSFWSGHPVRLDNVNLFFFDLFRGLPYAASLLLFLSVH
EFGHFFTALHYRMRATLPYYIPVPPLPFLLSLGTMGAVIKIKDRIPNTNALFDTGVSGPLSGFIVSLGLLLFGFYHLPPA
SWIFTVHPEYIASGGIPNPAPEGTLTLGKNLLWIVLEQVIAPKNLPPMTEMYHYPFLFTGWLGCFVTALNLIPVGQLDGG
HVTYAMFGKQGYKKTAKTFMFIIGILGFPSLLELTFSLILPAQTIRIPGELLQWSWPGWMLWFLILSRFIGTDHPPTSHD
CSLSASRRAIGWVAIVIFIITFVPVPFGVQ
>Mature_350_residues
MDNDHKHAMNGTNQSRATILAEQNYPLHIALFLLTALCTLWAGSFWSGHPVRLDNVNLFFFDLFRGLPYAASLLLFLSVH
EFGHFFTALHYRMRATLPYYIPVPPLPFLLSLGTMGAVIKIKDRIPNTNALFDTGVSGPLSGFIVSLGLLLFGFYHLPPA
SWIFTVHPEYIASGGIPNPAPEGTLTLGKNLLWIVLEQVIAPKNLPPMTEMYHYPFLFTGWLGCFVTALNLIPVGQLDGG
HVTYAMFGKQGYKKTAKTFMFIIGILGFPSLLELTFSLILPAQTIRIPGELLQWSWPGWMLWFLILSRFIGTDHPPTSHD
CSLSASRRAIGWVAIVIFIITFVPVPFGVQ

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39035; Mature: 39035

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNDHKHAMNGTNQSRATILAEQNYPLHIALFLLTALCTLWAGSFWSGHPVRLDNVNLFF
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHH
FDLFRGLPYAASLLLFLSVHEFGHFFTALHYRMRATLPYYIPVPPLPFLLSLGTMGAVIK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCEEEE
IKDRIPNTNALFDTGVSGPLSGFIVSLGLLLFGFYHLPPASWIFTVHPEYIASGGIPNPA
EECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCC
PEGTLTLGKNLLWIVLEQVIAPKNLPPMTEMYHYPFLFTGWLGCFVTALNLIPVGQLDGG
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
HVTYAMFGKQGYKKTAKTFMFIIGILGFPSLLELTFSLILPAQTIRIPGELLQWSWPGWM
EEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHEECCHHHHCCCCCHHH
LWFLILSRFIGTDHPPTSHDCSLSASRRAIGWVAIVIFIITFVPVPFGVQ
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDNDHKHAMNGTNQSRATILAEQNYPLHIALFLLTALCTLWAGSFWSGHPVRLDNVNLFF
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHH
FDLFRGLPYAASLLLFLSVHEFGHFFTALHYRMRATLPYYIPVPPLPFLLSLGTMGAVIK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCEEEE
IKDRIPNTNALFDTGVSGPLSGFIVSLGLLLFGFYHLPPASWIFTVHPEYIASGGIPNPA
EECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCC
PEGTLTLGKNLLWIVLEQVIAPKNLPPMTEMYHYPFLFTGWLGCFVTALNLIPVGQLDGG
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
HVTYAMFGKQGYKKTAKTFMFIIGILGFPSLLELTFSLILPAQTIRIPGELLQWSWPGWM
EEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHEECCHHHHCCCCCHHH
LWFLILSRFIGTDHPPTSHDCSLSASRRAIGWVAIVIFIITFVPVPFGVQ
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA