| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is aegA [H]
Identifier: 119356326
GI number: 119356326
Start: 536306
End: 537754
Strand: Reverse
Name: aegA [H]
Synonym: Cpha266_0489
Alternate gene names: 119356326
Gene position: 537754-536306 (Counterclockwise)
Preceding gene: 119356327
Following gene: 119356325
Centisome position: 17.16
GC content: 51.21
Gene sequence:
>1449_bases ATGAATGAAAAAACTATCTCAAACAAAGAGCGTCTTGCCATTCCCAGACAAAAAATGCCTGCACAGGACCCGAACGAACG GGTTACCAATTTCAGAGAGGTAAATCTCGGGTATACCCCTGAACTTGCACGGATGGAGGCGTTACGATGTATTCAGTGCA AGGACCCGGTCTGCATTGCGGGGTGCCCGGTCAACATCAAAATCGACCAGTTCATCAAGATGGTAGCCGATGGAGATTTT CTCGGCGCAGCAAAAAAAATAAAAGAGGACAACGTTTTGCCGGCAATCTGCGGAAGAGTCTGCCCGCAGGAAGACCAGTG CGAAAAAGTCTGTGTCATAGGAAAAAAACATGAACCGGTTGCCATCGGTCACCTTGAACGTTTTGTCGCCGACTACGAAC GCCAAACCGGCCATGTCGAGATCCCTGAAGTCAAACCGCCAACCGGCAAAAAAATCGCAATTATCGGCAGCGGTCCGGCA GGGCTGAGCTGTGCAAACGATCTGGTACGTCTTGGGCATGAGATAGTCGTATTTGAAGCGCTGCACGAACTTGGCGGCGT GCTCATGTACGGGATTCCCGAGTTTCGTCTTCCCAAAGAGATTGTCCGGCAGGAACTCGATGGCCTGAAACAGATGGGGG TCTCATTCCAGACCAATGTTGTGGTTGGACGATCGGTGACGATCGACGAGCTTATCGAAGAGGAGGGATTCAATGCCGTT TTCATCGGCGTCGGAGCCGGACTGCCCTGGTTTATGGGCATCCCGGGAGAAAACCTTGCAGGAGTACTTTCAGCCAATGA ATTCCTCACCAGGGTAAATCTCATGAAAGCTTACGATTTCCCGGAAAGCGACACCCCTGTATTCCAGTGCAAGAACAGAA ACATTGCTGTTTTCGGAGGAGGCAACACCGCTATGGATGCTGTCCGTACAGCCAAAAGACTGGGCGCTGAACACGCCTAT ATCATTTACCGCCGCTCCGAAGCCGAAATGCCTGCCCGCCACGAAGAGATTCACCATGCAAAAGAAGAGGGTGTTGAGTT CCTGCTTCTCATGAACCCCATTGCATTTATCGGTAATGACCAGCAGCAGTTAACCGGCGTACGCTGCCTCCGGATGGAAC TTGGCGAACCCGATGATTCGGGAAGAAGACGACCGGTTCCAATCGAGGGATCGGAATTTCTGCTTCCCCTCGATATGGCC GTCATCTCGATCGGCAACGGCTCAAATCCGCTTATCAAGCAGACAACTCCGGATATAGAGGTCAGCAAACGAGATACGGT TGTCGTTGACATCAACACCATGGCCACCTCAAAAAATATGGTTTATGCCGGTGGAGATATCGTTACCGGAGGAGCAACCG TTATTCTTGCCATGGGTGCAGGACGTACAGCGGCAAAAGCAATTCACGAAAAGCTCATGGGCGAATCACATGGTTTTGAC GAGTGGTAA
Upstream 100 bases:
>100_bases TTCCCTGGATGCTCTCTGCCATTGATTCCCGACAAAACGGAGATCAATGGCAGAGTTTATCATCGAAACAAGTTTTAACG CATAGTAAAACAGAATTATT
Downstream 100 bases:
>100_bases AAAGCATATAACTGCCAGACAATCAACCCCTATACCAGCAACAACATGAGTGAGATATACCGTTTCGGCGTATCCCTCGA CAAGTCCCTGATCGAAGCAT
Product: putative oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MNEKTISNKERLAIPRQKMPAQDPNERVTNFREVNLGYTPELARMEALRCIQCKDPVCIAGCPVNIKIDQFIKMVADGDF LGAAKKIKEDNVLPAICGRVCPQEDQCEKVCVIGKKHEPVAIGHLERFVADYERQTGHVEIPEVKPPTGKKIAIIGSGPA GLSCANDLVRLGHEIVVFEALHELGGVLMYGIPEFRLPKEIVRQELDGLKQMGVSFQTNVVVGRSVTIDELIEEEGFNAV FIGVGAGLPWFMGIPGENLAGVLSANEFLTRVNLMKAYDFPESDTPVFQCKNRNIAVFGGGNTAMDAVRTAKRLGAEHAY IIYRRSEAEMPARHEEIHHAKEEGVEFLLLMNPIAFIGNDQQQLTGVRCLRMELGEPDDSGRRRPVPIEGSEFLLPLDMA VISIGNGSNPLIKQTTPDIEVSKRDTVVVDINTMATSKNMVYAGGDIVTGGATVILAMGAGRTAAKAIHEKLMGESHGFD EW
Sequences:
>Translated_482_residues MNEKTISNKERLAIPRQKMPAQDPNERVTNFREVNLGYTPELARMEALRCIQCKDPVCIAGCPVNIKIDQFIKMVADGDF LGAAKKIKEDNVLPAICGRVCPQEDQCEKVCVIGKKHEPVAIGHLERFVADYERQTGHVEIPEVKPPTGKKIAIIGSGPA GLSCANDLVRLGHEIVVFEALHELGGVLMYGIPEFRLPKEIVRQELDGLKQMGVSFQTNVVVGRSVTIDELIEEEGFNAV FIGVGAGLPWFMGIPGENLAGVLSANEFLTRVNLMKAYDFPESDTPVFQCKNRNIAVFGGGNTAMDAVRTAKRLGAEHAY IIYRRSEAEMPARHEEIHHAKEEGVEFLLLMNPIAFIGNDQQQLTGVRCLRMELGEPDDSGRRRPVPIEGSEFLLPLDMA VISIGNGSNPLIKQTTPDIEVSKRDTVVVDINTMATSKNMVYAGGDIVTGGATVILAMGAGRTAAKAIHEKLMGESHGFD EW >Mature_482_residues MNEKTISNKERLAIPRQKMPAQDPNERVTNFREVNLGYTPELARMEALRCIQCKDPVCIAGCPVNIKIDQFIKMVADGDF LGAAKKIKEDNVLPAICGRVCPQEDQCEKVCVIGKKHEPVAIGHLERFVADYERQTGHVEIPEVKPPTGKKIAIIGSGPA GLSCANDLVRLGHEIVVFEALHELGGVLMYGIPEFRLPKEIVRQELDGLKQMGVSFQTNVVVGRSVTIDELIEEEGFNAV FIGVGAGLPWFMGIPGENLAGVLSANEFLTRVNLMKAYDFPESDTPVFQCKNRNIAVFGGGNTAMDAVRTAKRLGAEHAY IIYRRSEAEMPARHEEIHHAKEEGVEFLLLMNPIAFIGNDQQQLTGVRCLRMELGEPDDSGRRRPVPIEGSEFLLPLDMA VISIGNGSNPLIKQTTPDIEVSKRDTVVVDINTMATSKNMVYAGGDIVTGGATVILAMGAGRTAAKAIHEKLMGESHGFD EW
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=454, Percent_Identity=31.9383259911894, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI237757300, Length=90, Percent_Identity=41.1111111111111, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1788811, Length=452, Percent_Identity=38.2743362831858, Blast_Score=313, Evalue=2e-86, Organism=Escherichia coli, GI1789606, Length=450, Percent_Identity=36.8888888888889, Blast_Score=298, Evalue=4e-82, Organism=Escherichia coli, GI87082180, Length=449, Percent_Identity=37.1937639198218, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1788468, Length=446, Percent_Identity=32.0627802690583, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1789243, Length=455, Percent_Identity=31.4285714285714, Blast_Score=166, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17570289, Length=494, Percent_Identity=29.3522267206478, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71984108, Length=465, Percent_Identity=29.8924731182796, Blast_Score=174, Evalue=9e-44, Organism=Caenorhabditis elegans, GI17543860, Length=164, Percent_Identity=30.4878048780488, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320030, Length=482, Percent_Identity=29.4605809128631, Blast_Score=206, Evalue=6e-54, Organism=Drosophila melanogaster, GI24665547, Length=486, Percent_Identity=28.1893004115226, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24665543, Length=486, Percent_Identity=28.1893004115226, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI28574881, Length=486, Percent_Identity=28.1893004115226, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI24665539, Length=486, Percent_Identity=28.1893004115226, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI24640763, Length=444, Percent_Identity=31.5315315315315, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI18858217, Length=444, Percent_Identity=31.5315315315315, Blast_Score=196, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 52796; Mature: 52796
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKTISNKERLAIPRQKMPAQDPNERVTNFREVNLGYTPELARMEALRCIQCKDPVCIA CCCCCCCCCHHCCCCHHHCCCCCCHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEE GCPVNIKIDQFIKMVADGDFLGAAKKIKEDNVLPAICGRVCPQEDQCEKVCVIGKKHEPV CCCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCE AIGHLERFVADYERQTGHVEIPEVKPPTGKKIAIIGSGPAGLSCANDLVRLGHEIVVFEA EHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHH LHELGGVLMYGIPEFRLPKEIVRQELDGLKQMGVSFQTNVVVGRSVTIDELIEEEGFNAV HHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCCCEE FIGVGAGLPWFMGIPGENLAGVLSANEFLTRVNLMKAYDFPESDTPVFQCKNRNIAVFGG EEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEC GNTAMDAVRTAKRLGAEHAYIIYRRSEAEMPARHEEIHHAKEEGVEFLLLMNPIAFIGND CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHEECCC QQQLTGVRCLRMELGEPDDSGRRRPVPIEGSEFLLPLDMAVISIGNGSNPLIKQTTPDIE HHHHHHHHHEEHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEECCCCCCE VSKRDTVVVDINTMATSKNMVYAGGDIVTGGATVILAMGAGRTAAKAIHEKLMGESHGFD ECCCCEEEEEEEEEECCCCEEEECCCEEECCEEEEEEECCCHHHHHHHHHHHCCCCCCCC EW CC >Mature Secondary Structure MNEKTISNKERLAIPRQKMPAQDPNERVTNFREVNLGYTPELARMEALRCIQCKDPVCIA CCCCCCCCCHHCCCCHHHCCCCCCHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEE GCPVNIKIDQFIKMVADGDFLGAAKKIKEDNVLPAICGRVCPQEDQCEKVCVIGKKHEPV CCCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCE AIGHLERFVADYERQTGHVEIPEVKPPTGKKIAIIGSGPAGLSCANDLVRLGHEIVVFEA EHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHH LHELGGVLMYGIPEFRLPKEIVRQELDGLKQMGVSFQTNVVVGRSVTIDELIEEEGFNAV HHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCCCEE FIGVGAGLPWFMGIPGENLAGVLSANEFLTRVNLMKAYDFPESDTPVFQCKNRNIAVFGG EEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEC GNTAMDAVRTAKRLGAEHAYIIYRRSEAEMPARHEEIHHAKEEGVEFLLLMNPIAFIGND CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHEECCC QQQLTGVRCLRMELGEPDDSGRRRPVPIEGSEFLLPLDMAVISIGNGSNPLIKQTTPDIE HHHHHHHHHEEHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEECCCCCCE VSKRDTVVVDINTMATSKNMVYAGGDIVTGGATVILAMGAGRTAAKAIHEKLMGESHGFD ECCCCEEEEEEEEEECCCCEEEECCCEEECCEEEEEEECCCHHHHHHHHHHHCCCCCCCC EW CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]