| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356308
Identifier: 119356308
GI number: 119356308
Start: 520419
End: 521084
Strand: Reverse
Name: 119356308
Synonym: Cpha266_0471
Alternate gene names: NA
Gene position: 521084-520419 (Counterclockwise)
Preceding gene: 119356309
Following gene: 119356307
Centisome position: 16.63
GC content: 49.4
Gene sequence:
>666_bases ATGATACCAGTTCTCCGAACGAAGCTCGACCGGCAAACGCCGTTCGGCTTCTCCTGCAAGCAGTGCCTGCAATGCTGCAC TGCAAAAAAAATCCAGGTTAACCCCTATGAGATTGCACGTCTTGCACGAAATCTCGACATTTCGACAACCGCTTTTATTG CACGTTACACCGTTCATAACGGTTCGTTCCTGCAAACCACCCATAACAAAACCTGTCTCTTTCTTGGTGCTGAGGGGTGT CTTGTACACGCCGATCGTCCGCTTGTCTGCCGCCTCTATCCTCTGGCCAGACATGTGAACCACAAAGGAGACGAGTGGTT TTCAGAACTGCAGCCTGAGCAAGGATGCAGAGGAATCCATAAAAAAACCGGTACCATTGAAAACTATCTTGAAGAACAGG GCGCAACCCCGTACATGCTGGCAGCAAACAGCTATCTGAACCTGCTCTGGGAGATGATGACAATCCTTGAAAGCACCACA CAGGACGATAAAGATGGTACTGAAGAGCCGGAAAACACGATGGTTGAAAACGGTCAGTTAATGGATATGGACGCGGCTCT CAACATTTACTGCCAGGAGAGAGAACTTCGGGTACCCCGCTCCGTTGAAAAAAAAATGCAGATGCACCTTGAGGCGCTGT ACCTATGGACGAAAGAGAAACCCTGA
Upstream 100 bases:
>100_bases GAATTAATCGGCAACTGCCATGCAAAATCCCTGAAAACCTTGTAACTTCAATGGTGACATGATCGAGTTCTTTTCATGTT CACAACAAGAATAAGACTTT
Downstream 100 bases:
>100_bases ATACCTGTTAACAGGAGATCCATCATGAACAAAAAAACAACCAAAGCCCTCACCCTTGCCGCTGCCGTTACCTCTCTGGG CGCATCACTTGGCGTTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MIPVLRTKLDRQTPFGFSCKQCLQCCTAKKIQVNPYEIARLARNLDISTTAFIARYTVHNGSFLQTTHNKTCLFLGAEGC LVHADRPLVCRLYPLARHVNHKGDEWFSELQPEQGCRGIHKKTGTIENYLEEQGATPYMLAANSYLNLLWEMMTILESTT QDDKDGTEEPENTMVENGQLMDMDAALNIYCQERELRVPRSVEKKMQMHLEALYLWTKEKP
Sequences:
>Translated_221_residues MIPVLRTKLDRQTPFGFSCKQCLQCCTAKKIQVNPYEIARLARNLDISTTAFIARYTVHNGSFLQTTHNKTCLFLGAEGC LVHADRPLVCRLYPLARHVNHKGDEWFSELQPEQGCRGIHKKTGTIENYLEEQGATPYMLAANSYLNLLWEMMTILESTT QDDKDGTEEPENTMVENGQLMDMDAALNIYCQERELRVPRSVEKKMQMHLEALYLWTKEKP >Mature_221_residues MIPVLRTKLDRQTPFGFSCKQCLQCCTAKKIQVNPYEIARLARNLDISTTAFIARYTVHNGSFLQTTHNKTCLFLGAEGC LVHADRPLVCRLYPLARHVNHKGDEWFSELQPEQGCRGIHKKTGTIENYLEEQGATPYMLAANSYLNLLWEMMTILESTT QDDKDGTEEPENTMVENGQLMDMDAALNIYCQERELRVPRSVEKKMQMHLEALYLWTKEKP
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25420; Mature: 25420
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVLRTKLDRQTPFGFSCKQCLQCCTAKKIQVNPYEIARLARNLDISTTAFIARYTVHN CCCCHHHHHCCCCCCCCCHHHHHHHHCCCCEECCHHHHHHHHHCCCCCHHHHEEEEEECC GSFLQTTHNKTCLFLGAEGCLVHADRPLVCRLYPLARHVNHKGDEWFSELQPEQGCRGIH CCEEEECCCCEEEEEECCCEEEECCCCEEEEHHHHHHHCCCCCHHHHHHCCHHHHHHHHH KKTGTIENYLEEQGATPYMLAANSYLNLLWEMMTILESTTQDDKDGTEEPENTMVENGQL HCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEE MDMDAALNIYCQERELRVPRSVEKKMQMHLEALYLWTKEKP EEHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCC >Mature Secondary Structure MIPVLRTKLDRQTPFGFSCKQCLQCCTAKKIQVNPYEIARLARNLDISTTAFIARYTVHN CCCCHHHHHCCCCCCCCCHHHHHHHHCCCCEECCHHHHHHHHHCCCCCHHHHEEEEEECC GSFLQTTHNKTCLFLGAEGCLVHADRPLVCRLYPLARHVNHKGDEWFSELQPEQGCRGIH CCEEEECCCCEEEEEECCCEEEECCCCEEEEHHHHHHHCCCCCHHHHHHCCHHHHHHHHH KKTGTIENYLEEQGATPYMLAANSYLNLLWEMMTILESTTQDDKDGTEEPENTMVENGQL HCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEE MDMDAALNIYCQERELRVPRSVEKKMQMHLEALYLWTKEKP EEHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA