Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is ubiE [H]

Identifier: 119356285

GI number: 119356285

Start: 494843

End: 495475

Strand: Direct

Name: ubiE [H]

Synonym: Cpha266_0447

Alternate gene names: 119356285

Gene position: 494843-495475 (Clockwise)

Preceding gene: 119356284

Following gene: 119356286

Centisome position: 15.79

GC content: 51.5

Gene sequence:

>633_bases
ATGTACAGCATGGACGCAAAGGAGTTTAACGACAAGATCATGAACGGTCATTTCCGGAAAATCTATCCGGTTATTGCCCG
TCAGATTGTCGATCGTACCGGAATTTCCGAAGGGTGCTGCGTTGATCTTGGCGGAGGTCCGGGACTGCTTGGAATCTCGC
TTGCCAAAATCACCCGCCTGCAGGTAACGGTGTATGATCTTATGCCGGAATGCGTTGCTCTGGCTCTGCAGAACAGCGTG
GAGCACGGGGTTGATGATCAGGTTACGGCACAGCAGGGGATTGCCGAATGTATGCCGTTCGACGAGAACTCACTTGATCT
TGTTGTCAGCAGGGGATCGATTTTTTTCTGGGAGAATCAGATGCAGGGTCTTGCGGAAGTCTATCGAGTGCTTAAACCCG
GGGGTTGGGCCTATCTCGGCGGAGGGTTCGGCACTTCTGAACTGCTTCGGGAGATTGAACTGCTTATGGCTGACGAAGCT
GACTGGAACCGCAAACGTCAGGAGCGGATGGTAAAAAATCCACCCGAACAGTTTGAGTCGATGCTTCGGCAACTTGGAAT
TGAGGGTCGTGTTGAGCAGGACGATGCAGGCATGTGGGTCGTTTTTTGTAAACAAAAATCCGCAAAAGCATGA

Upstream 100 bases:

>100_bases
ACGGTGTTGATGTTCGGATTTTCGATACCCCGTTTGATGGCCATGCCGGACGAAAGGTCTGCGCTCCGGTTCTTGACTGA
AACCATAAAAAGATATCGCG

Downstream 100 bases:

>100_bases
GCGGCGGTTTTATCGGCAGCTATATCGCAGTGGTGCGGATCGCAGCGGTTTTGATCCTCTTTTTTACCACGGCATGCAGT
CCGCATGAAGATCGGCGGTA

Product: methyltransferase type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MYSMDAKEFNDKIMNGHFRKIYPVIARQIVDRTGISEGCCVDLGGGPGLLGISLAKITRLQVTVYDLMPECVALALQNSV
EHGVDDQVTAQQGIAECMPFDENSLDLVVSRGSIFFWENQMQGLAEVYRVLKPGGWAYLGGGFGTSELLREIELLMADEA
DWNRKRQERMVKNPPEQFESMLRQLGIEGRVEQDDAGMWVVFCKQKSAKA

Sequences:

>Translated_210_residues
MYSMDAKEFNDKIMNGHFRKIYPVIARQIVDRTGISEGCCVDLGGGPGLLGISLAKITRLQVTVYDLMPECVALALQNSV
EHGVDDQVTAQQGIAECMPFDENSLDLVVSRGSIFFWENQMQGLAEVYRVLKPGGWAYLGGGFGTSELLREIELLMADEA
DWNRKRQERMVKNPPEQFESMLRQLGIEGRVEQDDAGMWVVFCKQKSAKA
>Mature_210_residues
MYSMDAKEFNDKIMNGHFRKIYPVIARQIVDRTGISEGCCVDLGGGPGLLGISLAKITRLQVTVYDLMPECVALALQNSV
EHGVDDQVTAQQGIAECMPFDENSLDLVVSRGSIFFWENQMQGLAEVYRVLKPGGWAYLGGGFGTSELLREIELLMADEA
DWNRKRQERMVKNPPEQFESMLRQLGIEGRVEQDDAGMWVVFCKQKSAKA

Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004033 [H]

Pfam domain/function: PF01209 Ubie_methyltran [H]

EC number: NA

Molecular weight: Translated: 23499; Mature: 23499

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSMDAKEFNDKIMNGHFRKIYPVIARQIVDRTGISEGCCVDLGGGPGLLGISLAKITRL
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHH
QVTVYDLMPECVALALQNSVEHGVDDQVTAQQGIAECMPFDENSLDLVVSRGSIFFWENQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEHHH
MQGLAEVYRVLKPGGWAYLGGGFGTSELLREIELLMADEADWNRKRQERMVKNPPEQFES
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH
MLRQLGIEGRVEQDDAGMWVVFCKQKSAKA
HHHHCCCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MYSMDAKEFNDKIMNGHFRKIYPVIARQIVDRTGISEGCCVDLGGGPGLLGISLAKITRL
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHH
QVTVYDLMPECVALALQNSVEHGVDDQVTAQQGIAECMPFDENSLDLVVSRGSIFFWENQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEHHH
MQGLAEVYRVLKPGGWAYLGGGFGTSELLREIELLMADEADWNRKRQERMVKNPPEQFES
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH
MLRQLGIEGRVEQDDAGMWVVFCKQKSAKA
HHHHCCCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]