| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356278
Identifier: 119356278
GI number: 119356278
Start: 486186
End: 488390
Strand: Direct
Name: 119356278
Synonym: Cpha266_0440
Alternate gene names: NA
Gene position: 486186-488390 (Clockwise)
Preceding gene: 119356268
Following gene: 119356279
Centisome position: 15.51
GC content: 49.21
Gene sequence:
>2205_bases ATGAAAAAAACAGCTCTTTTGGTTTTTCTTCTTGCGTTTCCCGCACTTGCGTCGGCAAGTGAGATATCCGAGGCATATCC TTCCGCCGAAGAGGTAACCGTTACCGGAAAAAAAGGGGATATTCTGCAACAGGTTACGGGCAGGGAGTCTGAGCTGCTCA ATCCTTCGCAGATGTCTGTCTACAAGGCGATCAACCTCATGCCTTCGCTCAGCCAGCAGAGTGTTGATCCGTACGGGCTT GCCGATATTGTCAACTATCACGAATCGTTTCGTTTCAGGGGCGTTGAGGCAACATCCGGTGGTGTTCCCGCCACAACGGT GAATGTTGAGGGTCTTCCCGTAACCGGAAGGCCTGGCGGAGGAGCTACCATCTACGACCTTGAAAATTTCAGTAATATCA ATATCTATACCGGAGTTATGCCTGCCAGCGCAGGGCTTGGTCTTGCCGATGTCGGGGGCAAGATCAATATGGAGATCCGT CGTCCCGAAGAGAGCTTTGGTGTGCTTTTCAAACAGGGCTTCGGCAGCAATGATTTTCGCCGCACCTTTTTGCGGGTTGA TACCGGAGCTCTTCCCGGTGACGTGAAAAGTTTCATCTCCTTTTCTGATGCCGCAGCCGATAAATGGAAAGGCGAGGGCG ACAGCCAGAGACGCAATGTGATGGCGGGAGTAACGAAAACGTTTGGCGATAATGTCAAACTTGAAGCCTTTGTGACCTAC AGCAAAGGGGATATTCATGCATACAGGCCCTTCAGCTATGCTCAAATCGGCAACCTCGAAAGCGCTTATACAATCGATTA CGGAACGAATCCCGACAGTTATGACTATTACGGATACAACCGTAACGAGTTCGAGGACTGGATGGTGATGGCCAATCTCG AAGTAAAAACCGGCGAGCACTCGAAACTTGACATCAAGCCCTACTACTGGAGCGACAAAGGATACTATCTTGAAACCATT ACCCTTGCGAACAATCAGAACCGGATCAGACGGTGGGACATCGATCACGATCTGAAGGGCGTACTTGCCGAGTATACGAC AACGATCGGTAGTGTTGATCTTGATTTCGGCTACCTCTACCATACGCAGGTACGTCCCGGACCGCCAACCTCGTGGAAAA ACTACAAGGTTGTTAACGGCAAGCCTGTTTTTGATCAGTGGAACATTCTTTCAAACAGCTCAAGCCATGAACTGCACTCT CCGTTTCTTGAGGCAACATACCGATTCGGTTCCTGGAAGCTTGAAGGAGGGCTGAAGTATATCAACTATACGCTCCCCTC AATCATTACCTATAACACGGCGGGTCTCGGCGATCTCAGTTACGACGAAGCTCTTGCCGGCAATCCGTCGATCAATGCCA AAGCCAGCGCACTGGATACAAAAAGTTTCAGCAGGCTCTTTCCGAATCTGACTCTGACACGGTTTATCGGCGACAATATC TCACTTCACGCTGCATACGGGGAAAACTACGTGACCCATGTCGATATTTACCCCTACTTTATCTCGCAGAGCGCCAATTT TATCCAGAAAGGTATCAGTTTTCAGCAGCTCTGGGATGCTCGGGAGATGGAGACCTCGCAAAATTTCGAGCTTGGTATGC GCGTGAAAGGCAGCAACTGGAGCATTGCGCCAACTATCTACTACGCGCTGCATAACAATAAACAAGCGGTATTGTACGAT CCTGTGCTCGATGCGACCTACCCGATGAACAATGCCGATGCCGAAGGGTATGGTTTCGAGCTGGAAGCCGAGTACAAGCC TCTTGAAAACCTGAGCTGTTACGGTTCATTCTCATGGAACAGGTTTTCCTTCTCACAGGACATCAACTCCGATGCTCCTG GCGGAGGAATCATCAAGGTGAAGGGAGAGCAGGTTCCCGATGCTCCGGAATTCCTGGCAAAAGGAATGGTCAGCTACAAG GCCGGGGACTTTTTGATTACTCCCATTGTCAGGTACACCTCGGTTCGCTACGGAGATGTACTGCATAATGAAAAGATCGA CAGCACAACGCTTTTTGATCTCGATCTGACCTGGCAGAAAAAGATGCTTGGCTTTAAAGAGGTCGAAATCTCACTTTCTC TTCTGAATATTTTCGACAAGCAGTATGTCAGCATGATCAGTACCTCTGATTATAAAACTCTGAAAACATCCTATCAAGCC GGTATGCCCTTTACCGTTATGGCAACGCTGGCAGTTCACTACTGA
Upstream 100 bases:
>100_bases TGAACGCACGGTTGGCGATATCGGGGAAGAAATCGATAATGATCGGTATTTTTAATCATCGTTATATACTTATATTTATA ACGAAAAACTATGGCTCTCT
Downstream 100 bases:
>100_bases GTTTTTTTTGTCACCTGTTCTTTCTCGTTTACACCTTCCCGGCGTTTCTCCGGCGCCGGGATTTTTTTCACTATTGCATG GATAACCGGAACATATGATA
Product: TonB-dependent receptor, putative
Products: NA
Alternate protein names: NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MKKTALLVFLLAFPALASASEISEAYPSAEEVTVTGKKGDILQQVTGRESELLNPSQMSVYKAINLMPSLSQQSVDPYGL ADIVNYHESFRFRGVEATSGGVPATTVNVEGLPVTGRPGGGATIYDLENFSNINIYTGVMPASAGLGLADVGGKINMEIR RPEESFGVLFKQGFGSNDFRRTFLRVDTGALPGDVKSFISFSDAAADKWKGEGDSQRRNVMAGVTKTFGDNVKLEAFVTY SKGDIHAYRPFSYAQIGNLESAYTIDYGTNPDSYDYYGYNRNEFEDWMVMANLEVKTGEHSKLDIKPYYWSDKGYYLETI TLANNQNRIRRWDIDHDLKGVLAEYTTTIGSVDLDFGYLYHTQVRPGPPTSWKNYKVVNGKPVFDQWNILSNSSSHELHS PFLEATYRFGSWKLEGGLKYINYTLPSIITYNTAGLGDLSYDEALAGNPSINAKASALDTKSFSRLFPNLTLTRFIGDNI SLHAAYGENYVTHVDIYPYFISQSANFIQKGISFQQLWDAREMETSQNFELGMRVKGSNWSIAPTIYYALHNNKQAVLYD PVLDATYPMNNADAEGYGFELEAEYKPLENLSCYGSFSWNRFSFSQDINSDAPGGGIIKVKGEQVPDAPEFLAKGMVSYK AGDFLITPIVRYTSVRYGDVLHNEKIDSTTLFDLDLTWQKKMLGFKEVEISLSLLNIFDKQYVSMISTSDYKTLKTSYQA GMPFTVMATLAVHY
Sequences:
>Translated_734_residues MKKTALLVFLLAFPALASASEISEAYPSAEEVTVTGKKGDILQQVTGRESELLNPSQMSVYKAINLMPSLSQQSVDPYGL ADIVNYHESFRFRGVEATSGGVPATTVNVEGLPVTGRPGGGATIYDLENFSNINIYTGVMPASAGLGLADVGGKINMEIR RPEESFGVLFKQGFGSNDFRRTFLRVDTGALPGDVKSFISFSDAAADKWKGEGDSQRRNVMAGVTKTFGDNVKLEAFVTY SKGDIHAYRPFSYAQIGNLESAYTIDYGTNPDSYDYYGYNRNEFEDWMVMANLEVKTGEHSKLDIKPYYWSDKGYYLETI TLANNQNRIRRWDIDHDLKGVLAEYTTTIGSVDLDFGYLYHTQVRPGPPTSWKNYKVVNGKPVFDQWNILSNSSSHELHS PFLEATYRFGSWKLEGGLKYINYTLPSIITYNTAGLGDLSYDEALAGNPSINAKASALDTKSFSRLFPNLTLTRFIGDNI SLHAAYGENYVTHVDIYPYFISQSANFIQKGISFQQLWDAREMETSQNFELGMRVKGSNWSIAPTIYYALHNNKQAVLYD PVLDATYPMNNADAEGYGFELEAEYKPLENLSCYGSFSWNRFSFSQDINSDAPGGGIIKVKGEQVPDAPEFLAKGMVSYK AGDFLITPIVRYTSVRYGDVLHNEKIDSTTLFDLDLTWQKKMLGFKEVEISLSLLNIFDKQYVSMISTSDYKTLKTSYQA GMPFTVMATLAVHY >Mature_734_residues MKKTALLVFLLAFPALASASEISEAYPSAEEVTVTGKKGDILQQVTGRESELLNPSQMSVYKAINLMPSLSQQSVDPYGL ADIVNYHESFRFRGVEATSGGVPATTVNVEGLPVTGRPGGGATIYDLENFSNINIYTGVMPASAGLGLADVGGKINMEIR RPEESFGVLFKQGFGSNDFRRTFLRVDTGALPGDVKSFISFSDAAADKWKGEGDSQRRNVMAGVTKTFGDNVKLEAFVTY SKGDIHAYRPFSYAQIGNLESAYTIDYGTNPDSYDYYGYNRNEFEDWMVMANLEVKTGEHSKLDIKPYYWSDKGYYLETI TLANNQNRIRRWDIDHDLKGVLAEYTTTIGSVDLDFGYLYHTQVRPGPPTSWKNYKVVNGKPVFDQWNILSNSSSHELHS PFLEATYRFGSWKLEGGLKYINYTLPSIITYNTAGLGDLSYDEALAGNPSINAKASALDTKSFSRLFPNLTLTRFIGDNI SLHAAYGENYVTHVDIYPYFISQSANFIQKGISFQQLWDAREMETSQNFELGMRVKGSNWSIAPTIYYALHNNKQAVLYD PVLDATYPMNNADAEGYGFELEAEYKPLENLSCYGSFSWNRFSFSQDINSDAPGGGIIKVKGEQVPDAPEFLAKGMVSYK AGDFLITPIVRYTSVRYGDVLHNEKIDSTTLFDLDLTWQKKMLGFKEVEISLSLLNIFDKQYVSMISTSDYKTLKTSYQA GMPFTVMATLAVHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81919; Mature: 81919
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTALLVFLLAFPALASASEISEAYPSAEEVTVTGKKGDILQQVTGRESELLNPSQMSV CCHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCHHHHHCCCHHHCCCCHHHHH YKAINLMPSLSQQSVDPYGLADIVNYHESFRFRGVEATSGGVPATTVNVEGLPVTGRPGG HHHHHHCCCCHHCCCCCCCHHHHHHHHHHHEEECEEECCCCCCEEEEEECCEEECCCCCC GATIYDLENFSNINIYTGVMPASAGLGLADVGGKINMEIRRPEESFGVLFKQGFGSNDFR CEEEEEECCCCCEEEEEECEECCCCCCHHHCCCEEEEEEECCCHHHCCCEECCCCCCHHH RTFLRVDTGALPGDVKSFISFSDAAADKWKGEGDSQRRNVMAGVTKTFGDNVKLEAFVTY EEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEE SKGDIHAYRPFSYAQIGNLESAYTIDYGTNPDSYDYYGYNRNEFEDWMVMANLEVKTGEH CCCCEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC SKLDIKPYYWSDKGYYLETITLANNQNRIRRWDIDHDLKGVLAEYTTTIGSVDLDFGYLY CEEEEEEEEECCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCEEECCEEEE HTQVRPGPPTSWKNYKVVNGKPVFDQWNILSNSSSHELHSPFLEATYRFGSWKLEGGLKY EEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCHHHHHEECCCEEECCCEEE INYTLPSIITYNTAGLGDLSYDEALAGNPSINAKASALDTKSFSRLFPNLTLTRFIGDNI EEEECCCEEEECCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHHHHHCCCCEEEEECCCCE SLHAAYGENYVTHVDIYPYFISQSANFIQKGISFQQLWDAREMETSQNFELGMRVKGSNW EEEEECCCCEEEEEEEEEEEECCCHHHHHHCCCHHHHHCHHHHCCCCCCEEEEEEECCCC SIAPTIYYALHNNKQAVLYDPVLDATYPMNNADAEGYGFELEAEYKPLENLSCYGSFSWN EECEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCC RFSFSQDINSDAPGGGIIKVKGEQVPDAPEFLAKGMVSYKAGDFLITPIVRYTSVRYGDV EEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHCCHHHCCCCCEEEECHHHHHCCCHHHH LHNEKIDSTTLFDLDLTWQKKMLGFKEVEISLSLLNIFDKQYVSMISTSDYKTLKTSYQA HCCCCCCCEEEEEEECCHHHHHCCEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCC GMPFTVMATLAVHY CCCCEEEEEHHCCC >Mature Secondary Structure MKKTALLVFLLAFPALASASEISEAYPSAEEVTVTGKKGDILQQVTGRESELLNPSQMSV CCHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCHHHHHCCCHHHCCCCHHHHH YKAINLMPSLSQQSVDPYGLADIVNYHESFRFRGVEATSGGVPATTVNVEGLPVTGRPGG HHHHHHCCCCHHCCCCCCCHHHHHHHHHHHEEECEEECCCCCCEEEEEECCEEECCCCCC GATIYDLENFSNINIYTGVMPASAGLGLADVGGKINMEIRRPEESFGVLFKQGFGSNDFR CEEEEEECCCCCEEEEEECEECCCCCCHHHCCCEEEEEEECCCHHHCCCEECCCCCCHHH RTFLRVDTGALPGDVKSFISFSDAAADKWKGEGDSQRRNVMAGVTKTFGDNVKLEAFVTY EEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEE SKGDIHAYRPFSYAQIGNLESAYTIDYGTNPDSYDYYGYNRNEFEDWMVMANLEVKTGEH CCCCEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC SKLDIKPYYWSDKGYYLETITLANNQNRIRRWDIDHDLKGVLAEYTTTIGSVDLDFGYLY CEEEEEEEEECCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCEEECCEEEE HTQVRPGPPTSWKNYKVVNGKPVFDQWNILSNSSSHELHSPFLEATYRFGSWKLEGGLKY EEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCHHHHHEECCCEEECCCEEE INYTLPSIITYNTAGLGDLSYDEALAGNPSINAKASALDTKSFSRLFPNLTLTRFIGDNI EEEECCCEEEECCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHHHHHCCCCEEEEECCCCE SLHAAYGENYVTHVDIYPYFISQSANFIQKGISFQQLWDAREMETSQNFELGMRVKGSNW EEEEECCCCEEEEEEEEEEEECCCHHHHHHCCCHHHHHCHHHHCCCCCCEEEEEEECCCC SIAPTIYYALHNNKQAVLYDPVLDATYPMNNADAEGYGFELEAEYKPLENLSCYGSFSWN EECEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCC RFSFSQDINSDAPGGGIIKVKGEQVPDAPEFLAKGMVSYKAGDFLITPIVRYTSVRYGDV EEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHCCHHHCCCCCEEEECHHHHHCCCHHHH LHNEKIDSTTLFDLDLTWQKKMLGFKEVEISLSLLNIFDKQYVSMISTSDYKTLKTSYQA HCCCCCCCEEEEEEECCHHHHHCCEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCC GMPFTVMATLAVHY CCCCEEEEEHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA