| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356177
Identifier: 119356177
GI number: 119356177
Start: 369215
End: 369784
Strand: Reverse
Name: 119356177
Synonym: Cpha266_0338
Alternate gene names: NA
Gene position: 369784-369215 (Counterclockwise)
Preceding gene: 119356180
Following gene: 119356175
Centisome position: 11.8
GC content: 47.54
Gene sequence:
>570_bases ATGCCACCAGATCAGTTTACGATTTTCGGCGATAATTACCCAAGGGGCTCGTATATCCTTTTCCTGAAGGTTTCAAAGCC GATCCGACTTTCGTTCGGAAAATTTCAGGGCGGCCGGCTTCTTGATGTACCGAAAGGCGAGTACCTGTATATCGGTTCAG CGCTCGGAAGCGGAAAAGCTGATAAACCTCTCGCTCAACGGCTGGTTCGTCATGCATCGAGAAGCGGAAACAATAAACCT CAGCCCATACAGAAGACTCTGCGTCTTTTGTTTGAACCGGAGGCATCCTGTAAAAAAGCCGGTACCACTTTGCATAAAAA AATGCACTGGCATATTGATTACCTGCTTGATTGCCCTGAAACTGAAATTACGCATATCGTCGTCGTACAAAGCCCGCTTC GGCTTGAGCCTCTCCTCTGCAACTTCATCAGTTCGCTTGATACCGTAGAACCTCTGGCTAAACGCCTGGGAGCACAGGAC ACGAAAAACAGCACTCATCTTCTGAAAATCGCCGATTCAGAACAACTGCTCCTCATCATTAAAAACAAAATCCCGGAACT CATAGCCTGA
Upstream 100 bases:
>100_bases TATCTTTTTCCTGCATGAAAATCTTCCGATCATTGAACAGGATAACATCAGCGTTTTATTTTCAGCACCGCTAATATTGC ATCAAAATCAACAAAAAACA
Downstream 100 bases:
>100_bases AACTACTCCTGACGCCCAAGCAACGCTTCAACAAAACGGGCACGATCAAACAACTGCAAATCGTCAATCTTTTCACCTAC GCCGATATACTTTACCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MPPDQFTIFGDNYPRGSYILFLKVSKPIRLSFGKFQGGRLLDVPKGEYLYIGSALGSGKADKPLAQRLVRHASRSGNNKP QPIQKTLRLLFEPEASCKKAGTTLHKKMHWHIDYLLDCPETEITHIVVVQSPLRLEPLLCNFISSLDTVEPLAKRLGAQD TKNSTHLLKIADSEQLLLIIKNKIPELIA
Sequences:
>Translated_189_residues MPPDQFTIFGDNYPRGSYILFLKVSKPIRLSFGKFQGGRLLDVPKGEYLYIGSALGSGKADKPLAQRLVRHASRSGNNKP QPIQKTLRLLFEPEASCKKAGTTLHKKMHWHIDYLLDCPETEITHIVVVQSPLRLEPLLCNFISSLDTVEPLAKRLGAQD TKNSTHLLKIADSEQLLLIIKNKIPELIA >Mature_188_residues PPDQFTIFGDNYPRGSYILFLKVSKPIRLSFGKFQGGRLLDVPKGEYLYIGSALGSGKADKPLAQRLVRHASRSGNNKPQ PIQKTLRLLFEPEASCKKAGTTLHKKMHWHIDYLLDCPETEITHIVVVQSPLRLEPLLCNFISSLDTVEPLAKRLGAQDT KNSTHLLKIADSEQLLLIIKNKIPELIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21181; Mature: 21050
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDQFTIFGDNYPRGSYILFLKVSKPIRLSFGKFQGGRLLDVPKGEYLYIGSALGSGKA CCCCCEEEECCCCCCCCEEEEEEECCCEEEECCCCCCCEEEECCCCCEEEEECCCCCCCC DKPLAQRLVRHASRSGNNKPQPIQKTLRLLFEPEASCKKAGTTLHKKMHWHIDYLLDCPE CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCHHHHHHHHEEEEEEEECCC TEITHIVVVQSPLRLEPLLCNFISSLDTVEPLAKRLGAQDTKNSTHLLKIADSEQLLLII CCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEE KNKIPELIA ECCCHHHCC >Mature Secondary Structure PPDQFTIFGDNYPRGSYILFLKVSKPIRLSFGKFQGGRLLDVPKGEYLYIGSALGSGKA CCCCEEEECCCCCCCCEEEEEEECCCEEEECCCCCCCEEEECCCCCEEEEECCCCCCCC DKPLAQRLVRHASRSGNNKPQPIQKTLRLLFEPEASCKKAGTTLHKKMHWHIDYLLDCPE CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCHHHHHHHHEEEEEEEECCC TEITHIVVVQSPLRLEPLLCNFISSLDTVEPLAKRLGAQDTKNSTHLLKIADSEQLLLII CCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEE KNKIPELIA ECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA