Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356170

Identifier: 119356170

GI number: 119356170

Start: 360566

End: 361108

Strand: Direct

Name: 119356170

Synonym: Cpha266_0331

Alternate gene names: NA

Gene position: 360566-361108 (Clockwise)

Preceding gene: 119356169

Following gene: 119356171

Centisome position: 11.51

GC content: 45.49

Gene sequence:

>543_bases
ATGAAGACCTCTATACTGAATCGCAACGGTATAACACCTGAGATAGCGGGGCTGATTACTCGACTGGTTACCTTAATTCC
GTGGCCCGCTCGACGCCAAGCAATGGGAGATGTTGTTCTGACCATATTGGACGGTAAGCCAAGGGTTGCCGAAAATGAAT
TTGGCTGGAATCGCTCAGCTGTGGCATTAGGTATAAAGGAATATGAAAGTGGGATAGTCTGTGTCAACGATTTAACGGAA
CGACACAAACCAAAATCTGAAGAAAAGTATCCGGAGTTGCTTGCATCGATTCGGAAAATAATGGAGCCCCATAGTCAGGC
TGAGCCGCGCTTAAGAACAACGTTGCTCTATACGAACATGACAGCGCAGTCGGTCTATAATGCGCTTCTTGCCGAAGGAT
GGTCTGAAGAATCACTGCCTGCTGTTCGAACCATATCCAATATTTTGAACCGTCAGAAGTATCGATTACGGACGGTTCAG
AAAACCAAGGTTGAAAAAAAACAGCAGAAACAGATGCCATCTTCAACAACGTCTGGAAAATGA

Upstream 100 bases:

>100_bases
TTTTTCGCGGTTCCGGTCAAAAGCATCAGGGATTTGGTAAATACTGAAATACCTATTATAATATCTTCATACTGCAACGT
AAAAACTGGAGAACCTGCAT

Downstream 100 bases:

>100_bases
ATGCGTGGGCAGATGAGGATCCGGAAACCGTAAGATTGAGTATTGATACGAAAGCGACAGTGCTTGTCGGGCAATATTCA
CGAGGCGGCAAGTCTCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKTSILNRNGITPEIAGLITRLVTLIPWPARRQAMGDVVLTILDGKPRVAENEFGWNRSAVALGIKEYESGIVCVNDLTE
RHKPKSEEKYPELLASIRKIMEPHSQAEPRLRTTLLYTNMTAQSVYNALLAEGWSEESLPAVRTISNILNRQKYRLRTVQ
KTKVEKKQQKQMPSSTTSGK

Sequences:

>Translated_180_residues
MKTSILNRNGITPEIAGLITRLVTLIPWPARRQAMGDVVLTILDGKPRVAENEFGWNRSAVALGIKEYESGIVCVNDLTE
RHKPKSEEKYPELLASIRKIMEPHSQAEPRLRTTLLYTNMTAQSVYNALLAEGWSEESLPAVRTISNILNRQKYRLRTVQ
KTKVEKKQQKQMPSSTTSGK
>Mature_180_residues
MKTSILNRNGITPEIAGLITRLVTLIPWPARRQAMGDVVLTILDGKPRVAENEFGWNRSAVALGIKEYESGIVCVNDLTE
RHKPKSEEKYPELLASIRKIMEPHSQAEPRLRTTLLYTNMTAQSVYNALLAEGWSEESLPAVRTISNILNRQKYRLRTVQ
KTKVEKKQQKQMPSSTTSGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20360; Mature: 20360

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSILNRNGITPEIAGLITRLVTLIPWPARRQAMGDVVLTILDGKPRVAENEFGWNRSA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCHH
VALGIKEYESGIVCVNDLTERHKPKSEEKYPELLASIRKIMEPHSQAEPRLRTTLLYTNM
HHHHHHHHCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCH
TAQSVYNALLAEGWSEESLPAVRTISNILNRQKYRLRTVQKTKVEKKQQKQMPSSTTSGK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKTSILNRNGITPEIAGLITRLVTLIPWPARRQAMGDVVLTILDGKPRVAENEFGWNRSA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCHH
VALGIKEYESGIVCVNDLTERHKPKSEEKYPELLASIRKIMEPHSQAEPRLRTTLLYTNM
HHHHHHHHCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCH
TAQSVYNALLAEGWSEESLPAVRTISNILNRQKYRLRTVQKTKVEKKQQKQMPSSTTSGK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA