| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356162
Identifier: 119356162
GI number: 119356162
Start: 350470
End: 351522
Strand: Direct
Name: 119356162
Synonym: Cpha266_0320
Alternate gene names: NA
Gene position: 350470-351522 (Clockwise)
Preceding gene: 119356161
Following gene: 119356163
Centisome position: 11.18
GC content: 50.05
Gene sequence:
>1053_bases ATGATGAAAAATGATGCTCGATCCTATACGTCAGACCAACAGAAACTGCTGAGAATCAAGGCAGTCGACATGGTATTCAG GGAAGGTTTCACCCAGCGTGCCACCGCCAAGGCCCTTGGAGTTTCACGCCAGCATGTCGTCAAGTGGTGCAAGGCCTTTT CATCCGGAAGCTACGAGGCGCTTGAGCTTGGCCGTCGAGGCCGACGCCCAGGCGAACAAATGCTTCTTCAGCCGTGGCAA TGCGCCGTTATTTTCAACACCATTCGTGACAAGACTCCCGATCAGCTGAAAATGCCTTTTGTGCTTTGGGAGCGAATCGG TGTGCGCGAACTTATCAAAAAGAAATTTGGCATCACCTTGGCATTGCGAACGGTCGGCGAGTATCTGAAGCGCTGGGGCA TGACCCCGCAACGCCCTATAGAACGTGCTTATGAAAGAAGCTCACAGGCGGTAGAAAACTGGCTGAACAATGACTATCCC GCTATCCAGAAAAAGGCTGAAGAAGAGGGAGCAACGATTCTCTGGGGAGATGAGACCGGGGTGCAGAACACGTCCAATGT TGGTCGAAGCTATTCTCCAAGCGGGAAAACGCCGGTAATCAGGCAATCAGAAAAGAAGATCAAGACGAACATGATCTCGG CCATAACGAACCGAGGAAAAGTCCGATTCATGATTTACCCCGGCAAGATGAACCAACAGATGTTCATTCGTTTTCTGGAA CGCGTGATCGCAACGATTCCGGGCAAGGTCTTGTTCATCGTTGACAACCTTAAGGTTCATCACGGCAAAAAGGTAGCCGA ATGGGTTACTGAGCACATCGGGCGAATTGAGCTGTTCTATATCCCTTCTTACAGCCCTGATCTGAACCCCGATGAGTATT TGAATCGCGACCTTAAAAAGAACGTAAACAGCCGCGCTATTCCCCGAACGGAAGTGGAGCTTAAGATGAATCTCTTATCG TTCATGCGTAAGTTGCAGAAGTTGCCTGATCGGGTGATGAGTTACTTCAATTCAAGCCCGATCAAGTATGCTGCTCGTGC CGAAGCGGTGTAA
Upstream 100 bases:
>100_bases TGCCTTGACAGGAATGAACCAGCGGGTTGGAAACTGGCCTGGAGTTATTAATCCGGCAATCAAATAGGCGACTATTTCCG GAATTTGTTTATATTGCATC
Downstream 100 bases:
>100_bases CGTATTTGATTGCCGGATTAATACGGTTGATAAAAAGACCGGATTTTTTACTCATAACGGTCGCCATTACGAACTTGTCG ATCTTCCTGGTATCTACTCG
Product: transposase and inactivated derivatives
Products: NA
Alternate protein names: ISXo7 Transposase; Transposase And Inactivated Derivatives; ISXoo2 Transposase; Helix-Turn-Helix Type; Integrase Catalytic Region; Transposase Of IS; Transposase And Inactivated Derivatives-Like Protein; Transposase Related Protein; ISSoc4 Transposase OrfAB; Phosphoadenosine Phosphosulfate Reductase; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; ISAfe6 Transposase Degenerate; Transposase IS; Transposase Fragmentary Gene
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MMKNDARSYTSDQQKLLRIKAVDMVFREGFTQRATAKALGVSRQHVVKWCKAFSSGSYEALELGRRGRRPGEQMLLQPWQ CAVIFNTIRDKTPDQLKMPFVLWERIGVRELIKKKFGITLALRTVGEYLKRWGMTPQRPIERAYERSSQAVENWLNNDYP AIQKKAEEEGATILWGDETGVQNTSNVGRSYSPSGKTPVIRQSEKKIKTNMISAITNRGKVRFMIYPGKMNQQMFIRFLE RVIATIPGKVLFIVDNLKVHHGKKVAEWVTEHIGRIELFYIPSYSPDLNPDEYLNRDLKKNVNSRAIPRTEVELKMNLLS FMRKLQKLPDRVMSYFNSSPIKYAARAEAV
Sequences:
>Translated_350_residues MMKNDARSYTSDQQKLLRIKAVDMVFREGFTQRATAKALGVSRQHVVKWCKAFSSGSYEALELGRRGRRPGEQMLLQPWQ CAVIFNTIRDKTPDQLKMPFVLWERIGVRELIKKKFGITLALRTVGEYLKRWGMTPQRPIERAYERSSQAVENWLNNDYP AIQKKAEEEGATILWGDETGVQNTSNVGRSYSPSGKTPVIRQSEKKIKTNMISAITNRGKVRFMIYPGKMNQQMFIRFLE RVIATIPGKVLFIVDNLKVHHGKKVAEWVTEHIGRIELFYIPSYSPDLNPDEYLNRDLKKNVNSRAIPRTEVELKMNLLS FMRKLQKLPDRVMSYFNSSPIKYAARAEAV >Mature_350_residues MMKNDARSYTSDQQKLLRIKAVDMVFREGFTQRATAKALGVSRQHVVKWCKAFSSGSYEALELGRRGRRPGEQMLLQPWQ CAVIFNTIRDKTPDQLKMPFVLWERIGVRELIKKKFGITLALRTVGEYLKRWGMTPQRPIERAYERSSQAVENWLNNDYP AIQKKAEEEGATILWGDETGVQNTSNVGRSYSPSGKTPVIRQSEKKIKTNMISAITNRGKVRFMIYPGKMNQQMFIRFLE RVIATIPGKVLFIVDNLKVHHGKKVAEWVTEHIGRIELFYIPSYSPDLNPDEYLNRDLKKNVNSRAIPRTEVELKMNLLS FMRKLQKLPDRVMSYFNSSPIKYAARAEAV
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40466; Mature: 40466
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKNDARSYTSDQQKLLRIKAVDMVFREGFTQRATAKALGVSRQHVVKWCKAFSSGSYEA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH LELGRRGRRPGEQMLLQPWQCAVIFNTIRDKTPDQLKMPFVLWERIGVRELIKKKFGITL HHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHCCHHHHHHHCCHHHHHHHHHCHHH ALRTVGEYLKRWGMTPQRPIERAYERSSQAVENWLNNDYPAIQKKAEEEGATILWGDETG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCC VQNTSNVGRSYSPSGKTPVIRQSEKKIKTNMISAITNRGKVRFMIYPGKMNQQMFIRFLE CCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH RVIATIPGKVLFIVDNLKVHHGKKVAEWVTEHIGRIELFYIPSYSPDLNPDEYLNRDLKK HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHH NVNSRAIPRTEVELKMNLLSFMRKLQKLPDRVMSYFNSSPIKYAARAEAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC >Mature Secondary Structure MMKNDARSYTSDQQKLLRIKAVDMVFREGFTQRATAKALGVSRQHVVKWCKAFSSGSYEA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH LELGRRGRRPGEQMLLQPWQCAVIFNTIRDKTPDQLKMPFVLWERIGVRELIKKKFGITL HHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHCCHHHHHHHCCHHHHHHHHHCHHH ALRTVGEYLKRWGMTPQRPIERAYERSSQAVENWLNNDYPAIQKKAEEEGATILWGDETG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCC VQNTSNVGRSYSPSGKTPVIRQSEKKIKTNMISAITNRGKVRFMIYPGKMNQQMFIRFLE CCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH RVIATIPGKVLFIVDNLKVHHGKKVAEWVTEHIGRIELFYIPSYSPDLNPDEYLNRDLKK HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHH NVNSRAIPRTEVELKMNLLSFMRKLQKLPDRVMSYFNSSPIKYAARAEAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA