| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356157
Identifier: 119356157
GI number: 119356157
Start: 347869
End: 348480
Strand: Reverse
Name: 119356157
Synonym: Cpha266_0315
Alternate gene names: NA
Gene position: 348480-347869 (Counterclockwise)
Preceding gene: 119356172
Following gene: 119356151
Centisome position: 11.12
GC content: 46.73
Gene sequence:
>612_bases ATGCAACAGAGATTCTCAAAAAACCAGGAACAGAAGCTCTCGAACTGGCGGCGCCGGCTCAATACTCAAAAAAAATCGGA AGTATTATTTGAGCACTGGCTCTTTATGCATACTGCCGCAGTTCTTTTTGCCGGAAAGCCGGGAGAGTTGCTCATTTTAA AAAGAGGGTTATTCGGTCTGTTACCCGAAGAAACTCTGGAAAGTATCGATTCATTCTGCAGTTCATTAGCCCTGCAATTC AATGTTCTGCTGGAAAACGAACACTCCATAAAAGTCATATTCTACAACGAGGTCGCAGTTGACCGCCGCATTGGCTGCAT CCCAAAAAAAATTCTGCACTGCAACCTCCGCTATCCGTTCGGATTACGCAGCGAATCGTTTCTTAAGGAGCTGGGAAGAA GATGGCTTGAATCAGGGACAACACCTCATGAAATCGGGATTGTCCTTGGGTATCCTCTTAAGGATGTCTGGGGATTTATG GGTATTTCCTCTGACCCGTGCAGCGGCAGTTGCGGATGGAGAATTTATGGAAATCCTCTGCCTTCGCTAAAAAAAAGAAC CCTGTATAACCATGCACGCACGCGCGCAGAAACCTATCTGCGCGCGGCATAA
Upstream 100 bases:
>100_bases AAATCAAACAGGCAATCACTATGGCGTGCAACGGTCATCGGAAAGCCTGTCGACGTCGGCACTGACGAACACCAGAACGT CTGAACAAAAACAAACGGCT
Downstream 100 bases:
>100_bases AAAGCCATTTCCTCCAGCGAAAAATCAACGGCACCCAGCATGATCACTTCTGCTTCGGGCAATTTTCATCACAATTTCCA ACACATTTTCCGAAGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MQQRFSKNQEQKLSNWRRRLNTQKKSEVLFEHWLFMHTAAVLFAGKPGELLILKRGLFGLLPEETLESIDSFCSSLALQF NVLLENEHSIKVIFYNEVAVDRRIGCIPKKILHCNLRYPFGLRSESFLKELGRRWLESGTTPHEIGIVLGYPLKDVWGFM GISSDPCSGSCGWRIYGNPLPSLKKRTLYNHARTRAETYLRAA
Sequences:
>Translated_203_residues MQQRFSKNQEQKLSNWRRRLNTQKKSEVLFEHWLFMHTAAVLFAGKPGELLILKRGLFGLLPEETLESIDSFCSSLALQF NVLLENEHSIKVIFYNEVAVDRRIGCIPKKILHCNLRYPFGLRSESFLKELGRRWLESGTTPHEIGIVLGYPLKDVWGFM GISSDPCSGSCGWRIYGNPLPSLKKRTLYNHARTRAETYLRAA >Mature_203_residues MQQRFSKNQEQKLSNWRRRLNTQKKSEVLFEHWLFMHTAAVLFAGKPGELLILKRGLFGLLPEETLESIDSFCSSLALQF NVLLENEHSIKVIFYNEVAVDRRIGCIPKKILHCNLRYPFGLRSESFLKELGRRWLESGTTPHEIGIVLGYPLKDVWGFM GISSDPCSGSCGWRIYGNPLPSLKKRTLYNHARTRAETYLRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23415; Mature: 23415
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQRFSKNQEQKLSNWRRRLNTQKKSEVLFEHWLFMHTAAVLFAGKPGELLILKRGLFGL CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCC LPEETLESIDSFCSSLALQFNVLLENEHSIKVIFYNEVAVDRRIGCIPKKILHCNLRYPF CCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCHHHHHHCCCCHHHHEECCCCCC GLRSESFLKELGRRWLESGTTPHEIGIVLGYPLKDVWGFMGISSDPCSGSCGWRIYGNPL CCCCHHHHHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHCCCCCCCCCCCCCEEEECCCC PSLKKRTLYNHARTRAETYLRAA CHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQQRFSKNQEQKLSNWRRRLNTQKKSEVLFEHWLFMHTAAVLFAGKPGELLILKRGLFGL CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCC LPEETLESIDSFCSSLALQFNVLLENEHSIKVIFYNEVAVDRRIGCIPKKILHCNLRYPF CCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCHHHHHHCCCCHHHHEECCCCCC GLRSESFLKELGRRWLESGTTPHEIGIVLGYPLKDVWGFMGISSDPCSGSCGWRIYGNPL CCCCHHHHHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHCCCCCCCCCCCCCEEEECCCC PSLKKRTLYNHARTRAETYLRAA CHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA