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The map label for this gene is 119356147

Identifier: 119356147

GI number: 119356147

Start: 338629

End: 340107

Strand: Direct

Name: 119356147

Synonym: Cpha266_0305

Alternate gene names: NA

Gene position: 338629-340107 (Clockwise)

Preceding gene: 119356146

Following gene: 119356148

Centisome position: 10.81

GC content: 52.67

Gene sequence:

>1479_bases
ATGGATATGGAGAATTACAATGTCGTGGTTATTGGAGCAGGTATTGGCGGACTTGCAGCTGGAGCACTGCTTGCACGTAA
AGGCTTGCAGGTAACGGTGCTTGAAGCACAGGACTATCCCGGTGGTTGTGCTGCAACCTTTTCAATGCAGGGATACCGTT
TTGATGCTGGAGCCACGATCGGATGCGGATTTCATCCGGGAGCGCCGATGGATATGCTTGGCAGGGAGCTTGGCATTTCC
TGGCCGGTGACGCCGGAACCGGTTGCCTGGCAATATCGTCACAGAGGCATTACGCTGAACCTCACAACATCCCGCAGCGA
GATTATCAATCGTTTTCCCCGATCGGAAGCTTTCTGGAAAGAACAGAGCCTTCTGGCCGCCTTGCTTTGGCGTCTCGCAG
AAGGGGGTCTGTCATGGCCGGTAAAAGGGCCTCGCGATCTTGCGCTGCTTGCTCGTAAAGGGGTTGCGGAACTACCCGGA
ACGGCAGTTCTGTTGAAATTTGCTGCAAAAACAGCGAGAGAGTGGCTTGCATCGCACGATCTTGATACCGATGCAGAGTT
TGTTCGCTTTCTTGATGCGCAATTGCTTGTTTCAGTTCAGACAACCACCATGCATGCCAATGCTCTCAATGCAGCCATAG
CGCTTGATCTTCCTGTTTCCGGAGCCAGCCGTATAGCCGGAGGGATTGGCAGGGTATCTGAACAGCTTGCCGGATCTATA
GCCGAAAGCGGGGGAGCGGTTCTCTACGGTCAGGAGGTCACCAGGATCGACTCGGTGCGAAGAGAGGTAATCGGTGTTGA
AACCAGGGACGGTGGAGCTTTTGCTGCCGATTTTACGATTGCAAATCTTACTCCTGATTCTCTTGAAAAGCTTGTCGATA
TGGAGGGAGAGCCCTTTTCGCGAGAAGAGATCGGTGCGAAGTGGAGTGCTTTTGTTCTCTATCTTGGAATGGATGCAGCA
TTTTTTGGCGGCGTTTTGCCGACTCATCTCCAGATTGTCGCCGGGAGCGGCGAGCTGGCTGAATGCGGCAGTATTTTTGT
TTCAGCATCTTCTCCTGTTGAAACGGATCGTGCTCCGGAGGGGCTTTGTGCCGTGACTATTTCAACCCATACTGCTCCGG
AACCCTGGTTTGAAGCGAAAAAAAGAGGTCAGAGCGCCTATCTTGAGATGAAAGAGCGGTATACCGAAAAAGTGCTGGAT
CTGTTTTCCGAACAGATTCCCGGAGTACGCGAGGCCATAAAAAGCATCACGGCGTCGACCCCTGTTACATGGGAGCGCTA
TACCGGAAGAGCAAACGGGCATGTCGGGGGGTATCCCCAGACCTCGCTTTTCAATGTGCGTGGTCCTGCAACCCGGTTTG
ACAATCTTTTTCTTGTCGGAGATTCCATTTTTCCGGGCCAGTCACTTCCCGGCGTTGTTACCGGAGCAAGAAGGAGTGTT
GAACTTCTTTTGCAGCGGATGGCCAAAGGAACCAGATAG

Upstream 100 bases:

>100_bases
CCTGGAACAGTCATAAAATGGGGGTTCCTCCCCGTTAAGAACTTTGCGCTCTGTCATGTGGTTTAACCATAACATGGCAT
CAAATTAACGGGAGATGAGT

Downstream 100 bases:

>100_bases
GAGCGCGTTTTTTCAGGGTTATCAAAGAGAGAGCCTTCAGTGCGCATGCAGGTACTATGAACAGAATTTGGTTATATTTT
CTCTTATGAACACCCTTGAA

Product: amine oxidase

Products: NA

Alternate protein names: Amine Oxidase; FAD Dependent Oxidoreductase; Phytoene Dehydrogenase; Carotene Isomerase; C-3 4' Desaturase CrtD; All-Trans-Retinol; Phytoene Dehydrogenase-Related Protein; Phytoene Dehydrogenase ; Lycopene Cyclase; Phytoene Dehydrogenase And Related Protein; Carotenoid Cis-Trans Isomerase; Phytoene Dehydrogenase/Carotenoid Isomerase; Phytoene Dehydrogenase And Related Proteins; Phytoene Desaturase; Phytoene Dehydrogenase-Like

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MDMENYNVVVIGAGIGGLAAGALLARKGLQVTVLEAQDYPGGCAATFSMQGYRFDAGATIGCGFHPGAPMDMLGRELGIS
WPVTPEPVAWQYRHRGITLNLTTSRSEIINRFPRSEAFWKEQSLLAALLWRLAEGGLSWPVKGPRDLALLARKGVAELPG
TAVLLKFAAKTAREWLASHDLDTDAEFVRFLDAQLLVSVQTTTMHANALNAAIALDLPVSGASRIAGGIGRVSEQLAGSI
AESGGAVLYGQEVTRIDSVRREVIGVETRDGGAFAADFTIANLTPDSLEKLVDMEGEPFSREEIGAKWSAFVLYLGMDAA
FFGGVLPTHLQIVAGSGELAECGSIFVSASSPVETDRAPEGLCAVTISTHTAPEPWFEAKKRGQSAYLEMKERYTEKVLD
LFSEQIPGVREAIKSITASTPVTWERYTGRANGHVGGYPQTSLFNVRGPATRFDNLFLVGDSIFPGQSLPGVVTGARRSV
ELLLQRMAKGTR

Sequences:

>Translated_492_residues
MDMENYNVVVIGAGIGGLAAGALLARKGLQVTVLEAQDYPGGCAATFSMQGYRFDAGATIGCGFHPGAPMDMLGRELGIS
WPVTPEPVAWQYRHRGITLNLTTSRSEIINRFPRSEAFWKEQSLLAALLWRLAEGGLSWPVKGPRDLALLARKGVAELPG
TAVLLKFAAKTAREWLASHDLDTDAEFVRFLDAQLLVSVQTTTMHANALNAAIALDLPVSGASRIAGGIGRVSEQLAGSI
AESGGAVLYGQEVTRIDSVRREVIGVETRDGGAFAADFTIANLTPDSLEKLVDMEGEPFSREEIGAKWSAFVLYLGMDAA
FFGGVLPTHLQIVAGSGELAECGSIFVSASSPVETDRAPEGLCAVTISTHTAPEPWFEAKKRGQSAYLEMKERYTEKVLD
LFSEQIPGVREAIKSITASTPVTWERYTGRANGHVGGYPQTSLFNVRGPATRFDNLFLVGDSIFPGQSLPGVVTGARRSV
ELLLQRMAKGTR
>Mature_492_residues
MDMENYNVVVIGAGIGGLAAGALLARKGLQVTVLEAQDYPGGCAATFSMQGYRFDAGATIGCGFHPGAPMDMLGRELGIS
WPVTPEPVAWQYRHRGITLNLTTSRSEIINRFPRSEAFWKEQSLLAALLWRLAEGGLSWPVKGPRDLALLARKGVAELPG
TAVLLKFAAKTAREWLASHDLDTDAEFVRFLDAQLLVSVQTTTMHANALNAAIALDLPVSGASRIAGGIGRVSEQLAGSI
AESGGAVLYGQEVTRIDSVRREVIGVETRDGGAFAADFTIANLTPDSLEKLVDMEGEPFSREEIGAKWSAFVLYLGMDAA
FFGGVLPTHLQIVAGSGELAECGSIFVSASSPVETDRAPEGLCAVTISTHTAPEPWFEAKKRGQSAYLEMKERYTEKVLD
LFSEQIPGVREAIKSITASTPVTWERYTGRANGHVGGYPQTSLFNVRGPATRFDNLFLVGDSIFPGQSLPGVVTGARRSV
ELLLQRMAKGTR

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52763; Mature: 52763

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMENYNVVVIGAGIGGLAAGALLARKGLQVTVLEAQDYPGGCAATFSMQGYRFDAGATI
CCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCEEECCCCEE
GCGFHPGAPMDMLGRELGISWPVTPEPVAWQYRHRGITLNLTTSRSEIINRFPRSEAFWK
ECCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHCCCCHHHHH
EQSLLAALLWRLAEGGLSWPVKGPRDLALLARKGVAELPGTAVLLKFAAKTAREWLASHD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCC
LDTDAEFVRFLDAQLLVSVQTTTMHANALNAAIALDLPVSGASRIAGGIGRVSEQLAGSI
CCCHHHHHHHHHHHHEEEEEEHEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
AESGGAVLYGQEVTRIDSVRREVIGVETRDGGAFAADFTIANLTPDSLEKLVDMEGEPFS
HHCCCEEEECCHHHHHHHHHHHHHEEEECCCCEEEEEEEEECCCHHHHHHHHCCCCCCCC
REEIGAKWSAFVLYLGMDAAFFGGVLPTHLQIVAGSGELAECGSIFVSASSPVETDRAPE
HHHHCCCCEEEEEEECCCHHHHCCCCCCEEEEEECCCCHHCCCEEEEECCCCCCCCCCCC
GLCAVTISTHTAPEPWFEAKKRGQSAYLEMKERYTEKVLDLFSEQIPGVREAIKSITAST
CEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PVTWERYTGRANGHVGGYPQTSLFNVRGPATRFDNLFLVGDSIFPGQSLPGVVTGARRSV
CCEEHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHCCHHHH
ELLLQRMAKGTR
HHHHHHHHCCCC
>Mature Secondary Structure
MDMENYNVVVIGAGIGGLAAGALLARKGLQVTVLEAQDYPGGCAATFSMQGYRFDAGATI
CCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCEEECCCCEE
GCGFHPGAPMDMLGRELGISWPVTPEPVAWQYRHRGITLNLTTSRSEIINRFPRSEAFWK
ECCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHCCCCHHHHH
EQSLLAALLWRLAEGGLSWPVKGPRDLALLARKGVAELPGTAVLLKFAAKTAREWLASHD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCC
LDTDAEFVRFLDAQLLVSVQTTTMHANALNAAIALDLPVSGASRIAGGIGRVSEQLAGSI
CCCHHHHHHHHHHHHEEEEEEHEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
AESGGAVLYGQEVTRIDSVRREVIGVETRDGGAFAADFTIANLTPDSLEKLVDMEGEPFS
HHCCCEEEECCHHHHHHHHHHHHHEEEECCCCEEEEEEEEECCCHHHHHHHHCCCCCCCC
REEIGAKWSAFVLYLGMDAAFFGGVLPTHLQIVAGSGELAECGSIFVSASSPVETDRAPE
HHHHCCCCEEEEEEECCCHHHHCCCCCCEEEEEECCCCHHCCCEEEEECCCCCCCCCCCC
GLCAVTISTHTAPEPWFEAKKRGQSAYLEMKERYTEKVLDLFSEQIPGVREAIKSITAST
CEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PVTWERYTGRANGHVGGYPQTSLFNVRGPATRFDNLFLVGDSIFPGQSLPGVVTGARRSV
CCEEHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHCCHHHH
ELLLQRMAKGTR
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA