Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356128

Identifier: 119356128

GI number: 119356128

Start: 315008

End: 315379

Strand: Direct

Name: 119356128

Synonym: Cpha266_0285

Alternate gene names: NA

Gene position: 315008-315379 (Clockwise)

Preceding gene: 119356125

Following gene: 119356129

Centisome position: 10.05

GC content: 44.62

Gene sequence:

>372_bases
ATGATTAGAAAAATTACCATCACTGGATTTTTGTTGTTAGCAGTCGCTTTCAATGCGAATGCGCAGGATATTGATCGAAT
CAACCAGCTTGAAAAAGAGGTTCGGGAGATAAATATTCGGCTATCGAAGCTGGAGTCTTTGCTGAGTAATCCGGGCAAGC
CCCATGAGCACGTAACACCGGGTGAGGGCTGGAAATCAATAATGAACTGGAGAAAGCTGACCACAGATATGGATTACAGC
GACGTACAAAAAACGCTTGGTGAACCGCAACGAGTAGACGGCGGCCAGGTTGCGCATTGGTATTACCAGAATGGTGGAAA
TGTTACTTTTATGGGTGGAAAAGTTTATCAATGGAGTGAACCTCGACATTAG

Upstream 100 bases:

>100_bases
GCGAACAAGTTGATGGGCAGATACTTCCGAATCGTAAATAAATTTTCCGATGCTGAGCACTGCTCATCCGCGGCAACGTT
ATGTGTAATAGAGGAAGGCC

Downstream 100 bases:

>100_bases
CACATAACACCACCACCACTCATTTATCGTTAAAACCACTTTGCTGTTTTCCGAACGGTTATGTAGGCATTATGATGGTT
ACGGCCACGGCAAATAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MIRKITITGFLLLAVAFNANAQDIDRINQLEKEVREINIRLSKLESLLSNPGKPHEHVTPGEGWKSIMNWRKLTTDMDYS
DVQKTLGEPQRVDGGQVAHWYYQNGGNVTFMGGKVYQWSEPRH

Sequences:

>Translated_123_residues
MIRKITITGFLLLAVAFNANAQDIDRINQLEKEVREINIRLSKLESLLSNPGKPHEHVTPGEGWKSIMNWRKLTTDMDYS
DVQKTLGEPQRVDGGQVAHWYYQNGGNVTFMGGKVYQWSEPRH
>Mature_123_residues
MIRKITITGFLLLAVAFNANAQDIDRINQLEKEVREINIRLSKLESLLSNPGKPHEHVTPGEGWKSIMNWRKLTTDMDYS
DVQKTLGEPQRVDGGQVAHWYYQNGGNVTFMGGKVYQWSEPRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14111; Mature: 14111

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKITITGFLLLAVAFNANAQDIDRINQLEKEVREINIRLSKLESLLSNPGKPHEHVTP
CCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GEGWKSIMNWRKLTTDMDYSDVQKTLGEPQRVDGGQVAHWYYQNGGNVTFMGGKVYQWSE
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCEEECCCC
PRH
CCC
>Mature Secondary Structure
MIRKITITGFLLLAVAFNANAQDIDRINQLEKEVREINIRLSKLESLLSNPGKPHEHVTP
CCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GEGWKSIMNWRKLTTDMDYSDVQKTLGEPQRVDGGQVAHWYYQNGGNVTFMGGKVYQWSE
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCEEECCCC
PRH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA