| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356105
Identifier: 119356105
GI number: 119356105
Start: 289482
End: 289934
Strand: Direct
Name: 119356105
Synonym: Cpha266_0260
Alternate gene names: NA
Gene position: 289482-289934 (Clockwise)
Preceding gene: 119356104
Following gene: 119356107
Centisome position: 9.24
GC content: 34.88
Gene sequence:
>453_bases ATGAAGAGTTCATTGATTAGATTTGCTATTATTCTTTTTGTATTTCTTTCTGGATGTGGAACAAAGGAGGAACCAACAGC ACAGGAAATTGCTGAAGCTCAGCTTAAAGAGACTCCTGCTTATAAAGACTATTCAGCCGATGCCAATACAGCATTTCTAA TTGAAGTTAAGGAAAGACTGAAAGCTCCAAGTGGTGCAGATTTTCCTTGGGATGATTTACCAAAAGAAGTAACAACAAAG GGAGTGAAGCTTTCTGATATGAGTCCTTATTTGCGTAAAGTCATAAAGGAAGCTCGAAAATTAAAAAAAGAAAATGCTGT TCGAGTCTATCAGAAAGATTCTTATGTAGATGCTGATAATTCATTTGGTGCTAAAATTCGTCAGCGTTATTTAGGTACAT TTATAATCTATACTGAATTTGGATATACCAAGTCGTTTGTTGAGTTCTATTAG
Upstream 100 bases:
>100_bases GTAAGTATAATGTTGCAAAAGTTTAAATATTTATCCTATTCAATAGGTTCATGATTGATTTCGCTTAGGCAGAAAATAAT TATAAATCCACTCCCATAGT
Downstream 100 bases:
>100_bases AGGATTCGGAAAGTCGGGCAATAAGGAAACAGGCAGGACTTTCTTTTGCCGCCCATCCGCATATGCTTCCGTCATGCTTG CGGCTTTGCTTTGGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKSSLIRFAIILFVFLSGCGTKEEPTAQEIAEAQLKETPAYKDYSADANTAFLIEVKERLKAPSGADFPWDDLPKEVTTK GVKLSDMSPYLRKVIKEARKLKKENAVRVYQKDSYVDADNSFGAKIRQRYLGTFIIYTEFGYTKSFVEFY
Sequences:
>Translated_150_residues MKSSLIRFAIILFVFLSGCGTKEEPTAQEIAEAQLKETPAYKDYSADANTAFLIEVKERLKAPSGADFPWDDLPKEVTTK GVKLSDMSPYLRKVIKEARKLKKENAVRVYQKDSYVDADNSFGAKIRQRYLGTFIIYTEFGYTKSFVEFY >Mature_150_residues MKSSLIRFAIILFVFLSGCGTKEEPTAQEIAEAQLKETPAYKDYSADANTAFLIEVKERLKAPSGADFPWDDLPKEVTTK GVKLSDMSPYLRKVIKEARKLKKENAVRVYQKDSYVDADNSFGAKIRQRYLGTFIIYTEFGYTKSFVEFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17136; Mature: 17136
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSLIRFAIILFVFLSGCGTKEEPTAQEIAEAQLKETPAYKDYSADANTAFLIEVKERL CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHH KAPSGADFPWDDLPKEVTTKGVKLSDMSPYLRKVIKEARKLKKENAVRVYQKDSYVDADN CCCCCCCCCHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC SFGAKIRQRYLGTFIIYTEFGYTKSFVEFY CHHHHHHHHHHHHEEEEECCCCHHHHHHCC >Mature Secondary Structure MKSSLIRFAIILFVFLSGCGTKEEPTAQEIAEAQLKETPAYKDYSADANTAFLIEVKERL CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHH KAPSGADFPWDDLPKEVTTKGVKLSDMSPYLRKVIKEARKLKKENAVRVYQKDSYVDADN CCCCCCCCCHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC SFGAKIRQRYLGTFIIYTEFGYTKSFVEFY CHHHHHHHHHHHHEEEEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA