Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356093

Identifier: 119356093

GI number: 119356093

Start: 277733

End: 278035

Strand: Direct

Name: 119356093

Synonym: Cpha266_0246

Alternate gene names: NA

Gene position: 277733-278035 (Clockwise)

Preceding gene: 119356092

Following gene: 119356101

Centisome position: 8.86

GC content: 57.1

Gene sequence:

>303_bases
ATGAGCGGTTTACCATCGCCATCAAAAAAGAAAAAACGGCTTCTCGCCCCAAGAGAGGAGATTGCCTGGTTTCCCGTTAT
CGATACTGCTGCCTGTAACGGTTGCGGTGACTGTGAAGGCTTCTGCAAACCGGGGGTATTTGCCCTTGGCGAGCCCGAAG
GGGTCAAGCGGGCAAGAATGACTGTTGCCAACCCCTGGAACTGCATCGTGCTCTGCACCCGCTGCGAGCCCGTCTGTCCC
TCCGGCGCAATCACCCTGCCCCGCCCGGAAGATTTCGAGAGGTTCGTCGAATACGTCGATTGA

Upstream 100 bases:

>100_bases
TCTCCCTCCGAAGGAGGATTTCGAGCGCTTCGTGGAATATCTGGACTGACAGCAAGTCAGCCGGAGAGTACCGAAAGGAA
AACATAAAACGGAGTGTCTC

Downstream 100 bases:

>100_bases
GCGGCAGATCAGATTGGCGTGATTCTGTCGTCAATGTGGTTTCCATTTCAGCTGCTCACGCATCCAGCCGGATCTGGTGA
CATTTTTTCCTGATCAGCTC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSGLPSPSKKKKRLLAPREEIAWFPVIDTAACNGCGDCEGFCKPGVFALGEPEGVKRARMTVANPWNCIVLCTRCEPVCP
SGAITLPRPEDFERFVEYVD

Sequences:

>Translated_100_residues
MSGLPSPSKKKKRLLAPREEIAWFPVIDTAACNGCGDCEGFCKPGVFALGEPEGVKRARMTVANPWNCIVLCTRCEPVCP
SGAITLPRPEDFERFVEYVD
>Mature_99_residues
SGLPSPSKKKKRLLAPREEIAWFPVIDTAACNGCGDCEGFCKPGVFALGEPEGVKRARMTVANPWNCIVLCTRCEPVCPS
GAITLPRPEDFERFVEYVD

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10975; Mature: 10844

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
8.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPSPSKKKKRLLAPREEIAWFPVIDTAACNGCGDCEGFCKPGVFALGEPEGVKRARM
CCCCCCCCCHHHHCCCCHHHCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHEE
TVANPWNCIVLCTRCEPVCPSGAITLPRPEDFERFVEYVD
EECCCCCEEEEEECCCCCCCCCCEECCCCHHHHHHHHHCC
>Mature Secondary Structure 
SGLPSPSKKKKRLLAPREEIAWFPVIDTAACNGCGDCEGFCKPGVFALGEPEGVKRARM
CCCCCCCCHHHHCCCCHHHCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHEE
TVANPWNCIVLCTRCEPVCPSGAITLPRPEDFERFVEYVD
EECCCCCEEEEEECCCCCCCCCCEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA