| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356089
Identifier: 119356089
GI number: 119356089
Start: 272505
End: 272774
Strand: Reverse
Name: 119356089
Synonym: Cpha266_0242
Alternate gene names: NA
Gene position: 272774-272505 (Counterclockwise)
Preceding gene: 119356094
Following gene: 119356088
Centisome position: 8.7
GC content: 46.3
Gene sequence:
>270_bases ATGAGTTGGGGAGTGGAAGACGAAAAAAGGCGCAAAGGCGTTCTTGAACTTATGGAGTTATCCTCAAGAATCGTAAAAGA GAACCCAAACCATGTCAACGAGGTTGCAAAAAGCACCACCGGGTGCTGGATGGAGCAGATGTATGGCATGCAGCGGTGCG ATTTCTGCGACCTGGCATCCGATTGTCCGGTGAGAGAAGAAACTGAATGGCAGGAATATCTGCGGGTAAATAACATTGTG ATAGTCAAGGATAACGACAATATTACATGA
Upstream 100 bases:
>100_bases TGATCCGGCAATAAACTCCAGAAAAATATTTTATATTATTGATGTCTGTTTCGGGGTTTTAAATCCGCTTTTTTCCAGTA AAAACCAGGGGGTACTGCAT
Downstream 100 bases:
>100_bases ACGGTTTGTTTATCACATGCAGATATTTTATATTTAATGTTTTGCGGAAAACCTGATCGGTCATTTTATTTCAAGGGTTT TCCTCCCTCCGTTTATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSWGVEDEKRRKGVLELMELSSRIVKENPNHVNEVAKSTTGCWMEQMYGMQRCDFCDLASDCPVREETEWQEYLRVNNIV IVKDNDNIT
Sequences:
>Translated_89_residues MSWGVEDEKRRKGVLELMELSSRIVKENPNHVNEVAKSTTGCWMEQMYGMQRCDFCDLASDCPVREETEWQEYLRVNNIV IVKDNDNIT >Mature_88_residues SWGVEDEKRRKGVLELMELSSRIVKENPNHVNEVAKSTTGCWMEQMYGMQRCDFCDLASDCPVREETEWQEYLRVNNIVI VKDNDNIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10443; Mature: 10312
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWGVEDEKRRKGVLELMELSSRIVKENPNHVNEVAKSTTGCWMEQMYGMQRCDFCDLAS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DCPVREETEWQEYLRVNNIVIVKDNDNIT CCCCCCCHHHHHHHHHCCEEEEECCCCCC >Mature Secondary Structure SWGVEDEKRRKGVLELMELSSRIVKENPNHVNEVAKSTTGCWMEQMYGMQRCDFCDLAS CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DCPVREETEWQEYLRVNNIVIVKDNDNIT CCCCCCCHHHHHHHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA