| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356063
Identifier: 119356063
GI number: 119356063
Start: 239375
End: 239815
Strand: Reverse
Name: 119356063
Synonym: Cpha266_0216
Alternate gene names: NA
Gene position: 239815-239375 (Counterclockwise)
Preceding gene: 119356064
Following gene: 119356061
Centisome position: 7.65
GC content: 43.08
Gene sequence:
>441_bases ATGACAAACCATCAAAACCAGCAGGTAAGCTTTGCCCTTACTGAAATCACCACCGAAAACCTCAGCATCACACCTGAAAC TTTTGATACTGACAAACCTGTTCAAATGAACATCGGGCTGAACTTTGGAATAAACAGCGAAAAACAAAGCCTCAAAACAC TTTTCAAGGCAAGTTTTCACCAGGATGACCAGGAATTTATGGTCATTGAAACAGGCTGCGCCTTTACATTGGACCCGAAC TCATGGAAAATGCTTTCAAATGATGAAATCAGAAGATTTATCCTTCCCAAAACACTGGCCGCCCACTTCTCCGTGCTTAC CGCCGGAACAGCTCGAGGCATCCTGCATGTAAAAACCGAAAACACCCCTCTCAACAAGTTCATTATTCCCGCAAACAATC TTGATGGTCTGATCCAGAAGGATATCGTTCTGAACTATTAA
Upstream 100 bases:
>100_bases TACTGTACGATTTTAACAGAAACAGCCTTATTTTTGTAAGTTCAACGCTGTATGTAAAAAAACAGCCTTATTTACTTAAA ACCAACTGCTCGACAATATC
Downstream 100 bases:
>100_bases GCCTCAACACTCATTAAACAGAGAGGGTATGAAGCATCGAATTGCTTCATACCCTCTCTGTTTAATGCTGCCTGAAACAA GCTGAAACTAACACTTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTNHQNQQVSFALTEITTENLSITPETFDTDKPVQMNIGLNFGINSEKQSLKTLFKASFHQDDQEFMVIETGCAFTLDPN SWKMLSNDEIRRFILPKTLAAHFSVLTAGTARGILHVKTENTPLNKFIIPANNLDGLIQKDIVLNY
Sequences:
>Translated_146_residues MTNHQNQQVSFALTEITTENLSITPETFDTDKPVQMNIGLNFGINSEKQSLKTLFKASFHQDDQEFMVIETGCAFTLDPN SWKMLSNDEIRRFILPKTLAAHFSVLTAGTARGILHVKTENTPLNKFIIPANNLDGLIQKDIVLNY >Mature_145_residues TNHQNQQVSFALTEITTENLSITPETFDTDKPVQMNIGLNFGINSEKQSLKTLFKASFHQDDQEFMVIETGCAFTLDPNS WKMLSNDEIRRFILPKTLAAHFSVLTAGTARGILHVKTENTPLNKFIIPANNLDGLIQKDIVLNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16457; Mature: 16326
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNHQNQQVSFALTEITTENLSITPETFDTDKPVQMNIGLNFGINSEKQSLKTLFKASFH CCCCCCCEEEEEEEEEEECCCEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCC QDDQEFMVIETGCAFTLDPNSWKMLSNDEIRRFILPKTLAAHFSVLTAGTARGILHVKTE CCCCEEEEEECCEEEEECCCCEEEECCCCHHHHHCCHHHHHHHHHEECCCCCCEEEEEEC NTPLNKFIIPANNLDGLIQKDIVLNY CCCCCEEEEECCCCCCCEECCEEECC >Mature Secondary Structure TNHQNQQVSFALTEITTENLSITPETFDTDKPVQMNIGLNFGINSEKQSLKTLFKASFH CCCCCCEEEEEEEEEEECCCEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCC QDDQEFMVIETGCAFTLDPNSWKMLSNDEIRRFILPKTLAAHFSVLTAGTARGILHVKTE CCCCEEEEEECCEEEEECCCCEEEECCCCHHHHHCCHHHHHHHHHEECCCCCCEEEEEEC NTPLNKFIIPANNLDGLIQKDIVLNY CCCCCEEEEECCCCCCCEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA