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The map label for this gene is yjcF [C]

Identifier: 119356056

GI number: 119356056

Start: 233837

End: 235177

Strand: Direct

Name: yjcF [C]

Synonym: Cpha266_0209

Alternate gene names: 119356056

Gene position: 233837-235177 (Clockwise)

Preceding gene: 119356054

Following gene: 119356059

Centisome position: 7.46

GC content: 49.14

Gene sequence:

>1341_bases
ATGAAACAGATTTGGCACCTTGCAGGTATCGTTCTTTTAACCGTTTCGGGTTTTCTTCCAGTTTCATCAGCCATCGGGTT
TGATCCTGATGCCGTTAAGCTGCTGGTGAAAAGTCCGAAAGAGTGGAACGCCTTTCGCCAGCAGCATTCCATGCAGCCTG
TTGATCTTGACAAGGCAAAACTTGAAGATGCCGATCTTGAGGGGGCGAACCTCAGCAACAGTTCGCTTGTCAGAGCCGAG
TTGAGCGGGGCTAATCTGAACAATGCCGATTTACGAGGATCAAACCTTCAGCAGGCGTTTATTAAAAAAGCGGATCTTAA
AGGGGCCGACTTGCGTGAGGCTTACCTTGTCAAGGTGAATCTTAAAGAAGCATTCATGGAGAAGTCCATGCTTCAAAAAG
CGAATCTTCAAAGCGCTAATCTCAGATGGACAAGATTTCACAGGGCAGATCTTGCAGGATCGAACCTTCAGGATGCCGTT
CTGTTTGAAACCAGCTTTGTTGATGCTGATCTTCGGGGCGCCAATCTCAAGGGTGCGCTCTATGTTGGAAATGCCAATTT
CAGCGGAGCAAAAATATCCAGTAACACCATTACGCCTTCTGGTGAAAAAGCAACAGCGTCTTGGGCTGCGATACGCGATG
CTGAATATATCAAAGAAGCGGATGCGGCAATGCCGGTTTATGCTTCCCTTCCGGTTATGGTATTTGCATCCCCATCGGCA
GGCCTGAAGTCCGCATCCGCTTCCTCCGGTCAGGCAGTGATGGGCAGCAAACAGCAGCAAGCGCTGATGGTTGATGATGT
CGAAACCTGGAATACCATGCGTGCCGCCAATCCTGAGCTGAAAATAGAGTTGAAAGAGGAAAAACTTGAAAATGCAAGGC
TGAAGGGAGTGAATTTGCAGAAAGCTTCGATGCCTGGTGCCGATTTCGAGGATGCAAATCTTGACGAGGCCATGATGGAG
GGGGCCGATCTGAGTAAAGCCGATTTCCAGAAAGCGGATATGAAAAAAGTTAAACTTCAGGGGGCAAATCTTTCCGGAGC
GAATCTTGACCGTTCATTCATGGAAGGGGCAGATCTGCGCAATGCCAATCTCAGCGGAGCGAACCTGTTCGGAGCTATGC
TTAAGGATGCCAATCTCAGCGGCGCTAATCTCAGCGGAGCATCCCTGTTTGAGACAGATCTTGAGGGAGCAAATCTTTCC
GGAGCGAATCTTAAGGGAGCAAATCTCGTGGAGCCTAACCTGAAAAATGCGATCATCTCACCGGACACCATTCTTCCATC
CGGCAAGAATGCGACGCAGAGTTGGGCGGTTATAAAGGGAGCGACATTTGTTAAGCCTTAG

Upstream 100 bases:

>100_bases
TCATGAATATTGTCCGTTGTGCTTTTAAGAACGCACTGGTGCTGACAGGCTTAAGTCCAATAAAAAGAAAGCTCAGTGAA
AACAATCAAAACCATTCATT

Downstream 100 bases:

>100_bases
GCCGTTACCATTTACTATCATAAAGCAGCCGAATAAGTCAGATTATAAGGCTGCTTTTTTTATGCGTAGTACGTGCAGGA
TGAAAATCTGTTGTTGTGCT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKQIWHLAGIVLLTVSGFLPVSSAIGFDPDAVKLLVKSPKEWNAFRQQHSMQPVDLDKAKLEDADLEGANLSNSSLVRAE
LSGANLNNADLRGSNLQQAFIKKADLKGADLREAYLVKVNLKEAFMEKSMLQKANLQSANLRWTRFHRADLAGSNLQDAV
LFETSFVDADLRGANLKGALYVGNANFSGAKISSNTITPSGEKATASWAAIRDAEYIKEADAAMPVYASLPVMVFASPSA
GLKSASASSGQAVMGSKQQQALMVDDVETWNTMRAANPELKIELKEEKLENARLKGVNLQKASMPGADFEDANLDEAMME
GADLSKADFQKADMKKVKLQGANLSGANLDRSFMEGADLRNANLSGANLFGAMLKDANLSGANLSGASLFETDLEGANLS
GANLKGANLVEPNLKNAIISPDTILPSGKNATQSWAVIKGATFVKP

Sequences:

>Translated_446_residues
MKQIWHLAGIVLLTVSGFLPVSSAIGFDPDAVKLLVKSPKEWNAFRQQHSMQPVDLDKAKLEDADLEGANLSNSSLVRAE
LSGANLNNADLRGSNLQQAFIKKADLKGADLREAYLVKVNLKEAFMEKSMLQKANLQSANLRWTRFHRADLAGSNLQDAV
LFETSFVDADLRGANLKGALYVGNANFSGAKISSNTITPSGEKATASWAAIRDAEYIKEADAAMPVYASLPVMVFASPSA
GLKSASASSGQAVMGSKQQQALMVDDVETWNTMRAANPELKIELKEEKLENARLKGVNLQKASMPGADFEDANLDEAMME
GADLSKADFQKADMKKVKLQGANLSGANLDRSFMEGADLRNANLSGANLFGAMLKDANLSGANLSGASLFETDLEGANLS
GANLKGANLVEPNLKNAIISPDTILPSGKNATQSWAVIKGATFVKP
>Mature_446_residues
MKQIWHLAGIVLLTVSGFLPVSSAIGFDPDAVKLLVKSPKEWNAFRQQHSMQPVDLDKAKLEDADLEGANLSNSSLVRAE
LSGANLNNADLRGSNLQQAFIKKADLKGADLREAYLVKVNLKEAFMEKSMLQKANLQSANLRWTRFHRADLAGSNLQDAV
LFETSFVDADLRGANLKGALYVGNANFSGAKISSNTITPSGEKATASWAAIRDAEYIKEADAAMPVYASLPVMVFASPSA
GLKSASASSGQAVMGSKQQQALMVDDVETWNTMRAANPELKIELKEEKLENARLKGVNLQKASMPGADFEDANLDEAMME
GADLSKADFQKADMKKVKLQGANLSGANLDRSFMEGADLRNANLSGANLFGAMLKDANLSGANLSGASLFETDLEGANLS
GANLKGANLVEPNLKNAIISPDTILPSGKNATQSWAVIKGATFVKP

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=141, Percent_Identity=37.5886524822695, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221377802, Length=139, Percent_Identity=38.1294964028777, Blast_Score=80, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 47594; Mature: 47594

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIWHLAGIVLLTVSGFLPVSSAIGFDPDAVKLLVKSPKEWNAFRQQHSMQPVDLDKAK
CCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH
LEDADLEGANLSNSSLVRAELSGANLNNADLRGSNLQQAFIKKADLKGADLREAYLVKVN
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEE
LKEAFMEKSMLQKANLQSANLRWTRFHRADLAGSNLQDAVLFETSFVDADLRGANLKGAL
HHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEE
YVGNANFSGAKISSNTITPSGEKATASWAAIRDAEYIKEADAAMPVYASLPVMVFASPSA
EECCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCC
GLKSASASSGQAVMGSKQQQALMVDDVETWNTMRAANPELKIELKEEKLENARLKGVNLQ
CCCCCCCCCCCCHHCCCCCCEEEEECHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCEE
KASMPGADFEDANLDEAMMEGADLSKADFQKADMKKVKLQGANLSGANLDRSFMEGADLR
CCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCC
NANLSGANLFGAMLKDANLSGANLSGASLFETDLEGANLSGANLKGANLVEPNLKNAIIS
CCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEC
PDTILPSGKNATQSWAVIKGATFVKP
CCCCCCCCCCCCCCEEEEECCEECCC
>Mature Secondary Structure
MKQIWHLAGIVLLTVSGFLPVSSAIGFDPDAVKLLVKSPKEWNAFRQQHSMQPVDLDKAK
CCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH
LEDADLEGANLSNSSLVRAELSGANLNNADLRGSNLQQAFIKKADLKGADLREAYLVKVN
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEE
LKEAFMEKSMLQKANLQSANLRWTRFHRADLAGSNLQDAVLFETSFVDADLRGANLKGAL
HHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEE
YVGNANFSGAKISSNTITPSGEKATASWAAIRDAEYIKEADAAMPVYASLPVMVFASPSA
EECCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCC
GLKSASASSGQAVMGSKQQQALMVDDVETWNTMRAANPELKIELKEEKLENARLKGVNLQ
CCCCCCCCCCCCHHCCCCCCEEEEECHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCEE
KASMPGADFEDANLDEAMMEGADLSKADFQKADMKKVKLQGANLSGANLDRSFMEGADLR
CCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCC
NANLSGANLFGAMLKDANLSGANLSGASLFETDLEGANLSGANLKGANLVEPNLKNAIIS
CCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEC
PDTILPSGKNATQSWAVIKGATFVKP
CCCCCCCCCCCCCCEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]