| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356029
Identifier: 119356029
GI number: 119356029
Start: 208787
End: 209203
Strand: Reverse
Name: 119356029
Synonym: Cpha266_0182
Alternate gene names: NA
Gene position: 209203-208787 (Counterclockwise)
Preceding gene: 119356030
Following gene: 119356028
Centisome position: 6.68
GC content: 47.96
Gene sequence:
>417_bases ATGAAGGGACAAAACAACAGCGTTGCGTTTATTGCCGTTTTAATCACGCTGCTCGCCGGATGCGGAAAAGGCGAACAGCA TACCAATAACGCCAAAACGAAACCCGATCAAGCTCTATCCCTGCCGCTTTTTCAGACAGAGAGCACGCTGAATGCAAGAG GGGAAGAGGTTATCCTTGTGCCGAAATCATCAGTTTTTCAACAAGGCGGGCTGACAGGCGTATTTGTTGTTGGCGATGAT CAGAAAGCAACCATTCGATGGATAAGAACCGGGCGTATCGATCACGGCTCTGTTGTTGTACTCGGAGGAATAGACAAGGG AGAGATGGTTATAGCGAACTATAACCCCGAACTGAAGGAAGGAGTATCCGTAACAAAAAGTCAGGCTGTAACAAGGGAGG CCACATCCAATGAATGA
Upstream 100 bases:
>100_bases CCAGGCGAAATATGATTACTGCATAGCAAGAAGCGAGCTTGCCTATTATAGCGCAAGATAAAATGAATTCATCAACTGAT TCGAAACATCGACTGCAACC
Downstream 100 bases:
>100_bases AGGTATCGCAGGAAAACTGGCAAAACAGTTTATCAATTCGAAAATCACACCGCTGCTCATGATAGCGTCGCTTCTTGTCG GCGTTATGGCAACGTTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKGQNNSVAFIAVLITLLAGCGKGEQHTNNAKTKPDQALSLPLFQTESTLNARGEEVILVPKSSVFQQGGLTGVFVVGDD QKATIRWIRTGRIDHGSVVVLGGIDKGEMVIANYNPELKEGVSVTKSQAVTREATSNE
Sequences:
>Translated_138_residues MKGQNNSVAFIAVLITLLAGCGKGEQHTNNAKTKPDQALSLPLFQTESTLNARGEEVILVPKSSVFQQGGLTGVFVVGDD QKATIRWIRTGRIDHGSVVVLGGIDKGEMVIANYNPELKEGVSVTKSQAVTREATSNE >Mature_138_residues MKGQNNSVAFIAVLITLLAGCGKGEQHTNNAKTKPDQALSLPLFQTESTLNARGEEVILVPKSSVFQQGGLTGVFVVGDD QKATIRWIRTGRIDHGSVVVLGGIDKGEMVIANYNPELKEGVSVTKSQAVTREATSNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14694; Mature: 14694
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGQNNSVAFIAVLITLLAGCGKGEQHTNNAKTKPDQALSLPLFQTESTLNARGEEVILV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCEEEEE PKSSVFQQGGLTGVFVVGDDQKATIRWIRTGRIDHGSVVVLGGIDKGEMVIANYNPELKE CCHHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCHHH GVSVTKSQAVTREATSNE CCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKGQNNSVAFIAVLITLLAGCGKGEQHTNNAKTKPDQALSLPLFQTESTLNARGEEVILV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCEEEEE PKSSVFQQGGLTGVFVVGDDQKATIRWIRTGRIDHGSVVVLGGIDKGEMVIANYNPELKE CCHHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCHHH GVSVTKSQAVTREATSNE CCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA