| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is kynB [H]
Identifier: 119355953
GI number: 119355953
Start: 119559
End: 120194
Strand: Reverse
Name: kynB [H]
Synonym: Cpha266_0103
Alternate gene names: 119355953
Gene position: 120194-119559 (Counterclockwise)
Preceding gene: 119355959
Following gene: 119355952
Centisome position: 3.84
GC content: 52.83
Gene sequence:
>636_bases ATGAACATTATCGATCTGACCCACTCTCTTGAACCTGGCATGCCGGTCTATCCGGGAACGCCGCCACCTCTTTTTCAGGA GCTTTTCTCGTTTGCGGATCAGGGTTTCAGGGAACGGCAGATAACCCTCACGACACACACCGGAACCCATCTCGACGTCC CGTCGCACATTCTTGAGAGAGGAGACGATCTGGATAGTTTTTCCGTACAACATTTTGCCGGACCGGCGGCGGTCATTAGC CTCAATTGCTCTCCGACAACCCGTCTTGCCATCGGGGATCTCGAAGCGCATCTCCCCTCGCTCCGCGGGTGCGACTTTCT GTTGCTCTCTTCCGGATGGAGCCGATACTGGGGCAGCGAAAAGTACTTTACCGGATACCCGGTACTCAGTATGGAAGCTG CGTCGGCACTTGCCGGACTCGGCCTGAAAGGAATCGGTGTCGATATGATCTCCGTTGACGATCCCGATGCTCACGATCTC CCCGTGCACAGAATTTTTCTTGAAAAACGCATCATTCTTGTTGAAAATCTTGCCAATCTGGAACAACTGCCTCCAGTCGG ATTCGATTTTTTCTGCATGCCGCTCAAACTCTCACATTCTGAAGCATCTCCGGTTCGCGCAATCGCTATTATCTGA
Upstream 100 bases:
>100_bases TCACCCTCTAATGTAGCGAAAAACAGAAAACAATAAGAGCGGAGCGGGCATAACCATATATTTCAGTAAAGCCTGCGCCA AACACTATTTCAGCCGAATT
Downstream 100 bases:
>100_bases AATTGCTGCTATTTTCTTTGTAAAGTCGAAAAATGGTTTTACCTTCTCCCGCAGGAAAAACCTTCCTCTGTTCTTTTTCT TCTGAAAAAACTATTGTAAT
Product: cyclase family protein
Products: NA
Alternate protein names: KFA; N-formylkynurenine formamidase [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNIIDLTHSLEPGMPVYPGTPPPLFQELFSFADQGFRERQITLTTHTGTHLDVPSHILERGDDLDSFSVQHFAGPAAVIS LNCSPTTRLAIGDLEAHLPSLRGCDFLLLSSGWSRYWGSEKYFTGYPVLSMEAASALAGLGLKGIGVDMISVDDPDAHDL PVHRIFLEKRIILVENLANLEQLPPVGFDFFCMPLKLSHSEASPVRAIAII
Sequences:
>Translated_211_residues MNIIDLTHSLEPGMPVYPGTPPPLFQELFSFADQGFRERQITLTTHTGTHLDVPSHILERGDDLDSFSVQHFAGPAAVIS LNCSPTTRLAIGDLEAHLPSLRGCDFLLLSSGWSRYWGSEKYFTGYPVLSMEAASALAGLGLKGIGVDMISVDDPDAHDL PVHRIFLEKRIILVENLANLEQLPPVGFDFFCMPLKLSHSEASPVRAIAII >Mature_211_residues MNIIDLTHSLEPGMPVYPGTPPPLFQELFSFADQGFRERQITLTTHTGTHLDVPSHILERGDDLDSFSVQHFAGPAAVIS LNCSPTTRLAIGDLEAHLPSLRGCDFLLLSSGWSRYWGSEKYFTGYPVLSMEAASALAGLGLKGIGVDMISVDDPDAHDL PVHRIFLEKRIILVENLANLEQLPPVGFDFFCMPLKLSHSEASPVRAIAII
Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine [H]
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007325 [H]
Pfam domain/function: PF04199 Cyclase [H]
EC number: =3.5.1.9 [H]
Molecular weight: Translated: 23108; Mature: 23108
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIDLTHSLEPGMPVYPGTPPPLFQELFSFADQGFRERQITLTTHTGTHLDVPSHILER CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHC GDDLDSFSVQHFAGPAAVISLNCSPTTRLAIGDLEAHLPSLRGCDFLLLSSGWSRYWGSE CCCCCCCCHHHCCCCEEEEEEECCCCCEEEECCHHHHCCCCCCCCEEEECCCCHHHCCCC KYFTGYPVLSMEAASALAGLGLKGIGVDMISVDDPDAHDLPVHRIFLEKRIILVENLANL CEECCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHEEHHHHHH EQLPPVGFDFFCMPLKLSHSEASPVRAIAII HHCCCCCCCEEEEEEEECCCCCCCEEEEEEC >Mature Secondary Structure MNIIDLTHSLEPGMPVYPGTPPPLFQELFSFADQGFRERQITLTTHTGTHLDVPSHILER CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHC GDDLDSFSVQHFAGPAAVISLNCSPTTRLAIGDLEAHLPSLRGCDFLLLSSGWSRYWGSE CCCCCCCCHHHCCCCEEEEEEECCCCCEEEECCHHHHCCCCCCCCEEEECCCCHHHCCCC KYFTGYPVLSMEAASALAGLGLKGIGVDMISVDDPDAHDLPVHRIFLEKRIILVENLANL CEECCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHEEHHHHHH EQLPPVGFDFFCMPLKLSHSEASPVRAIAII HHCCCCCCCEEEEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA