| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is mjaIM [H]
Identifier: 119355923
GI number: 119355923
Start: 83897
End: 85186
Strand: Direct
Name: mjaIM [H]
Synonym: Cpha266_0073
Alternate gene names: 119355923
Gene position: 83897-85186 (Clockwise)
Preceding gene: 119355920
Following gene: 119355926
Centisome position: 2.68
GC content: 51.63
Gene sequence:
>1290_bases ATGAATCTGCTGCCGGACAGTTCGGTGCATCTTATCATTACCTCTCCCCCCTATTGGCAGCTCAAGGACTACGGGACGGA GAACCAGATCGGATTTCACGACAGCTATGAGAGCTACATCAACAATCTGAACCTTGTCTGGAGCGAGTGCGAGCGGGTGC TGCATCCCGGCTGCAGGCTCTGCATCAACATCGGCGACCAGTTCGCCCGTTCGGTGTATTACGGACGGTACAAGGTTATC CCGATCCGGACGGAGATCATCAGGTTCTGCGAGACTATCGGTTTCGACTATATGGGCGCGGTGATCTGGCAGAAGGTGAC GACAACCAACACCACCGGAGGCGCTTCCATTATGGGAAGCTTTCCGTATCCGCGCAACGGCATTCTCAAGCTCGATTATG AGTTCATTCTTCTGTTCAAAAAACAGGGAGATGCCCCGAAGCCGTCAAAAGAGCTGAAAGAGCGCTCAGCCATGACCACC GAAGAGTGGAACACCTGTTTCTCCGGACACTGGAACTTTGCCGGAGCAAAACAGGATGGCCATATCGCCGTGTTTCCGGA AGATCTGCCGCATCGCCTGATCAGGATGTTCGCTTTCGTCGGCGAAACGGTGCTCGATCCGTTCATGGGCAGCGGGACGA CCAGTCTTGCGGCAAAAAACCTCGACAGGAACTCGGTCGGCTACGAAATCAATCCCGAGTTTATCGGGATAGCAAGAGAG AAACTCAATTCCAACCAGACGGACTTTGCCGGAACGGAGTATGTTTTTCAGCACGATACCCTGAAGGGGGATATTTCCGA AATGATCGAGCGTCTTCCTTATCGTTTTCAAGACCCCCACAAACTCGACAAGAAAATCGACCCGCGAAAGCTGACGTTCG GTTCAAGAGTAGAAAAGGGTGGCGGGGCAAAACAGGAAGAGACGTTTATCGTCAGGGAGATTCTAAGCCCCGAGATGGTC AGATTGTCCAACGGCCTGACGGTGAGGCTGATCGGAGTGAAGGAAGACCCTTTCACGCGGGAAAAAGCTGTCGGGTATCT CGTTGACAAGATCAAGGGAAAACGGATTTTCATGAAGTACGACAGCATGAAATACGATGGGCGGAACAATCTGCTCTGTT ACCTCTATCTGGAAAACAGGACATTTGTCAACGCGCATCTGATCAGGAGTGGTTTAGTAGGGATTGACGGCAGCTACGAG TACAGGTACAAACAGAAATTCCTGGCTTTTTCTGATGAGAACAGCACACTTGTTCAAACAGGTCGGTGGTCTGGAATTGC TGCAAAGTGA
Upstream 100 bases:
>100_bases AAATCCGGAAAAATATCTATACTTCTTTCATTCGATCCTTTAACCCAATTGCAAACCATTGAAAACCCGTCACACCATAA TAGAAGGCGACAGCAGGCAG
Downstream 100 bases:
>100_bases AGATGTTGAACATGCAGGATACATGCAGGGGTTGTACTCCCTGTTTCAATATTTAATCCGGCATGGGAATGACCTTGTCA AGCCCGGTTTCCACAAGAAA
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: M.MjaI; N-4 cytosine-specific methyltransferase MjaI [H]
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MNLLPDSSVHLIITSPPYWQLKDYGTENQIGFHDSYESYINNLNLVWSECERVLHPGCRLCINIGDQFARSVYYGRYKVI PIRTEIIRFCETIGFDYMGAVIWQKVTTTNTTGGASIMGSFPYPRNGILKLDYEFILLFKKQGDAPKPSKELKERSAMTT EEWNTCFSGHWNFAGAKQDGHIAVFPEDLPHRLIRMFAFVGETVLDPFMGSGTTSLAAKNLDRNSVGYEINPEFIGIARE KLNSNQTDFAGTEYVFQHDTLKGDISEMIERLPYRFQDPHKLDKKIDPRKLTFGSRVEKGGGAKQEETFIVREILSPEMV RLSNGLTVRLIGVKEDPFTREKAVGYLVDKIKGKRIFMKYDSMKYDGRNNLLCYLYLENRTFVNAHLIRSGLVGIDGSYE YRYKQKFLAFSDENSTLVQTGRWSGIAAK
Sequences:
>Translated_429_residues MNLLPDSSVHLIITSPPYWQLKDYGTENQIGFHDSYESYINNLNLVWSECERVLHPGCRLCINIGDQFARSVYYGRYKVI PIRTEIIRFCETIGFDYMGAVIWQKVTTTNTTGGASIMGSFPYPRNGILKLDYEFILLFKKQGDAPKPSKELKERSAMTT EEWNTCFSGHWNFAGAKQDGHIAVFPEDLPHRLIRMFAFVGETVLDPFMGSGTTSLAAKNLDRNSVGYEINPEFIGIARE KLNSNQTDFAGTEYVFQHDTLKGDISEMIERLPYRFQDPHKLDKKIDPRKLTFGSRVEKGGGAKQEETFIVREILSPEMV RLSNGLTVRLIGVKEDPFTREKAVGYLVDKIKGKRIFMKYDSMKYDGRNNLLCYLYLENRTFVNAHLIRSGLVGIDGSYE YRYKQKFLAFSDENSTLVQTGRWSGIAAK >Mature_429_residues MNLLPDSSVHLIITSPPYWQLKDYGTENQIGFHDSYESYINNLNLVWSECERVLHPGCRLCINIGDQFARSVYYGRYKVI PIRTEIIRFCETIGFDYMGAVIWQKVTTTNTTGGASIMGSFPYPRNGILKLDYEFILLFKKQGDAPKPSKELKERSAMTT EEWNTCFSGHWNFAGAKQDGHIAVFPEDLPHRLIRMFAFVGETVLDPFMGSGTTSLAAKNLDRNSVGYEINPEFIGIARE KLNSNQTDFAGTEYVFQHDTLKGDISEMIERLPYRFQDPHKLDKKIDPRKLTFGSRVEKGGGAKQEETFIVREILSPEMV RLSNGLTVRLIGVKEDPFTREKAVGYLVDKIKGKRIFMKYDSMKYDGRNNLLCYLYLENRTFVNAHLIRSGLVGIDGSYE YRYKQKFLAFSDENSTLVQTGRWSGIAAK
Specific function: This methylase recognizes the double-stranded sequence CTAG, causes specific methylation on C-1 on both strands, and protects the DNA from cleavage by the MjaI endonuclease (Potential) [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.113 [H]
Molecular weight: Translated: 49070; Mature: 49070
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLPDSSVHLIITSPPYWQLKDYGTENQIGFHDSYESYINNLNLVWSECERVLHPGCRL CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEE CINIGDQFARSVYYGRYKVIPIRTEIIRFCETIGFDYMGAVIWQKVTTTNTTGGASIMGS EEECHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCCCEEEEC FPYPRNGILKLDYEFILLFKKQGDAPKPSKELKERSAMTTEEWNTCFSGHWNFAGAKQDG CCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHCHHCCCCCCCCCCCCCC HIAVFPEDLPHRLIRMFAFVGETVLDPFMGSGTTSLAAKNLDRNSVGYEINPEFIGIARE EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEECCHHEEHHHH KLNSNQTDFAGTEYVFQHDTLKGDISEMIERLPYRFQDPHKLDKKIDPRKLTFGSRVEKG HCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCEECCCCCCCCC GGAKQEETFIVREILSPEMVRLSNGLTVRLIGVKEDPFTREKAVGYLVDKIKGKRIFMKY CCCCCHHHHHHHHHCCCHHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE DSMKYDGRNNLLCYLYLENRTFVNAHLIRSGLVGIDGSYEYRYKQKFLAFSDENSTLVQT CCEEECCCCCEEEEEEECCCEEEEHHHHHCCCEECCCCCCEEEEEEEEEECCCCCEEEEC GRWSGIAAK CCCCCCCCC >Mature Secondary Structure MNLLPDSSVHLIITSPPYWQLKDYGTENQIGFHDSYESYINNLNLVWSECERVLHPGCRL CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEE CINIGDQFARSVYYGRYKVIPIRTEIIRFCETIGFDYMGAVIWQKVTTTNTTGGASIMGS EEECHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCCCEEEEC FPYPRNGILKLDYEFILLFKKQGDAPKPSKELKERSAMTTEEWNTCFSGHWNFAGAKQDG CCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHCHHCCCCCCCCCCCCCC HIAVFPEDLPHRLIRMFAFVGETVLDPFMGSGTTSLAAKNLDRNSVGYEINPEFIGIARE EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEECCHHEEHHHH KLNSNQTDFAGTEYVFQHDTLKGDISEMIERLPYRFQDPHKLDKKIDPRKLTFGSRVEKG HCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCEECCCCCCCCC GGAKQEETFIVREILSPEMVRLSNGLTVRLIGVKEDPFTREKAVGYLVDKIKGKRIFMKY CCCCCHHHHHHHHHCCCHHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE DSMKYDGRNNLLCYLYLENRTFVNAHLIRSGLVGIDGSYEYRYKQKFLAFSDENSTLVQT CCEEECCCCCEEEEEEECCCEEEEHHHHHCCCEECCCCCCEEEEEEEEEECCCCCEEEEC GRWSGIAAK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]