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The map label for this gene is atpD1 [H]

Identifier: 119355899

GI number: 119355899

Start: 50376

End: 51764

Strand: Reverse

Name: atpD1 [H]

Synonym: Cpha266_0049

Alternate gene names: 119355899

Gene position: 51764-50376 (Counterclockwise)

Preceding gene: 119355903

Following gene: 119355898

Centisome position: 1.65

GC content: 51.62

Gene sequence:

>1389_bases
ATGCAAGAAGGCAAGATTTCCCAGATCATCGGCCCTGTTGTGGATGTCGATTTTCCTGAAGGACAGCTCCCGTCGATTTT
AGATGCATTGACCATTACACGGCCAGATGGAACAAAACTTGTTCTTGAAACCCAGCAGCATCTTGGGGAAGAGCGTGTCC
GTACTGTTGCAATGGAAAGCACCGACGGCCTGATCAGAGGGCTTAGCGTCACCAACACCGAAAGACCTATCCAGGTGCCT
GTTGGCCCCGAAGTGCTGGGAAGAATGCTTAATGTCGTCGGCGATCCGATCGACGGAAGAGGCTCGGTTCATACAAGCAA
AACCTATTCGATTCACCGTTCAGCGCCGAAATTTGATGAGCTTTCAACCAAAACCGAGATGTTCGAAACCGGCATCAAGG
TTATCGATCTTCTCGAACCGTACTCAAGGGGCGGAAAAACCGGCCTTTTCGGTGGTGCGGGCGTAGGAAAAACCGTGCTC
ATCATGGAGCTGATCAACAACATCGCAAAGCAGCAGTCCGGCTACAGTGTGTTTGCGGGAGTAGGCGAGCGTACCCGTGA
GGGAAATGACCTCTGGCACGAAATGATGGAGTCCGGAGTTATCGACAAAACCGCGCTGGTTTTCGGTCAGATGAACGAGC
CTCCTGGCGCACGCGCAAGAGTCGCGCTTACAGGACTCAGTATTGCAGAGTATTTCCGCGATGAGGAAAACCGCGACGTG
TTGCTCTTCATCGACAACATTTTCCGTTTTACACAGGCAGGCTCGGAAGTATCCGCGCTCCTCGGACGTATGCCGAGCGC
CGTAGGTTACCAGCCAACCCTCGCAACAGAGATGGGCGAACTTCAGGATCGAATCGTTTCGACAAAAAAAGGTTCGGTTA
CATCGGTACAGGCAATCTATGTGCCTGCGGATGATCTTACCGATCCGGCTCCGGCCACCGCATTCGCTCACCTTGATGCA
ACAACCGTTCTGTCCCGATCAATTGCCGAGCTTGGTATCTATCCGGCGGTCGATCCGCTTGACTCAACTTCCCGTATTCT
TGATCCGAACATTGTCGGCGATGATCACTACGACACAGCCCAGGCGGTCAAACAGATCCTTCAGCGATACAAGGATCTTC
AGGATATTATCGCTATTCTCGGTATGGACGAATTAAGCGACGAAGACAAGCTTGTTGTTTCAAGGGCAAGAAAAGTCCAG
AGGTTCCTGTCGCAGCCGTTCTTCGTTGCCGAAGCGTTTACCGGTCTTGCCGGCAAATATGTCAAGCTTGACGAGACCAT
CAAAGGCTTCAAGGAGATCATTGCCGGAAAGCATGACAATCTTCCTGAAAGCGCTTTCTATCTTGTCGGGACCATTGAAG
AGGCTGTTCAGAAAGCAAAAACCCTGTAA

Upstream 100 bases:

>100_bases
TATGCTTTGTGCGCATGTTTTCCTTGTTAATGACAACCTGTTTACGGCATATCGTATAAGCATTTGATTTCATCATAAAA
ATCCTATCCAAACTGTCACT

Downstream 100 bases:

>100_bases
CCAATACTGATTACCATGGCAAGTTCAGAAAAAGGGTTTGATATAGAGATCGTTACGCCTCAGCAGCAGTATTTTTCAGG
CGAGATCCAGAGCATCATTG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta 1; F-ATPase subunit beta 1 [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MQEGKISQIIGPVVDVDFPEGQLPSILDALTITRPDGTKLVLETQQHLGEERVRTVAMESTDGLIRGLSVTNTERPIQVP
VGPEVLGRMLNVVGDPIDGRGSVHTSKTYSIHRSAPKFDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVL
IMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDV
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRIVSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDA
TTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQ
RFLSQPFFVAEAFTGLAGKYVKLDETIKGFKEIIAGKHDNLPESAFYLVGTIEEAVQKAKTL

Sequences:

>Translated_462_residues
MQEGKISQIIGPVVDVDFPEGQLPSILDALTITRPDGTKLVLETQQHLGEERVRTVAMESTDGLIRGLSVTNTERPIQVP
VGPEVLGRMLNVVGDPIDGRGSVHTSKTYSIHRSAPKFDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVL
IMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDV
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRIVSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDA
TTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQ
RFLSQPFFVAEAFTGLAGKYVKLDETIKGFKEIIAGKHDNLPESAFYLVGTIEEAVQKAKTL
>Mature_462_residues
MQEGKISQIIGPVVDVDFPEGQLPSILDALTITRPDGTKLVLETQQHLGEERVRTVAMESTDGLIRGLSVTNTERPIQVP
VGPEVLGRMLNVVGDPIDGRGSVHTSKTYSIHRSAPKFDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVL
IMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDV
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRIVSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDA
TTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQ
RFLSQPFFVAEAFTGLAGKYVKLDETIKGFKEIIAGKHDNLPESAFYLVGTIEEAVQKAKTL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=465, Percent_Identity=72.4731182795699, Blast_Score=684, Evalue=0.0,
Organism=Homo sapiens, GI19913428, Length=420, Percent_Identity=25.952380952381, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI19913424, Length=306, Percent_Identity=28.7581699346405, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI19913426, Length=419, Percent_Identity=23.3890214797136, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI50345984, Length=303, Percent_Identity=25.7425742574257, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI4757810, Length=303, Percent_Identity=25.7425742574257, Blast_Score=92, Evalue=8e-19,
Organism=Escherichia coli, GI1790170, Length=462, Percent_Identity=69.2640692640693, Blast_Score=658, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=409, Percent_Identity=28.1173594132029, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1790172, Length=316, Percent_Identity=27.2151898734177, Blast_Score=110, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI25144756, Length=465, Percent_Identity=68.8172043010753, Blast_Score=657, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17570191, Length=423, Percent_Identity=24.3498817966903, Blast_Score=115, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17565854, Length=326, Percent_Identity=27.9141104294479, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17510931, Length=416, Percent_Identity=24.2788461538462, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71988080, Length=303, Percent_Identity=24.7524752475248, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71988063, Length=303, Percent_Identity=24.7524752475248, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71988074, Length=305, Percent_Identity=22.6229508196721, Blast_Score=79, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=458, Percent_Identity=70.0873362445415, Blast_Score=654, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=423, Percent_Identity=25.7683215130024, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6319370, Length=365, Percent_Identity=25.2054794520548, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6320016, Length=257, Percent_Identity=26.4591439688716, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24638766, Length=465, Percent_Identity=71.3978494623656, Blast_Score=669, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=467, Percent_Identity=66.8094218415418, Blast_Score=623, Evalue=1e-178,
Organism=Drosophila melanogaster, GI20129479, Length=343, Percent_Identity=27.6967930029155, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24583992, Length=340, Percent_Identity=27.9411764705882, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24583988, Length=368, Percent_Identity=26.3586956521739, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583986, Length=368, Percent_Identity=26.3586956521739, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583984, Length=368, Percent_Identity=26.3586956521739, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281361666, Length=424, Percent_Identity=24.7641509433962, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24646341, Length=424, Percent_Identity=24.7641509433962, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI17136796, Length=424, Percent_Identity=24.7641509433962, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24658560, Length=303, Percent_Identity=26.7326732673267, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24638768, Length=92, Percent_Identity=53.2608695652174, Blast_Score=92, Evalue=7e-19,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 50340; Mature: 50340

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEGKISQIIGPVVDVDFPEGQLPSILDALTITRPDGTKLVLETQQHLGEERVRTVAMES
CCCCCHHHHHCCHHCCCCCCCCCHHHHHHHEEECCCCCEEEEHHHHHCCHHHHHHHHHCC
TDGLIRGLSVTNTERPIQVPVGPEVLGRMLNVVGDPIDGRGSVHTSKTYSIHRSAPKFDE
CCHHHCCCEECCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHH
LSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
VGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDV
CCCCCCCCHHHHHHHHHCCCCCHHHHHEECCCCCCCCCEEEEEEHHHHHHHHCCCCCCEE
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRIVSTKKGSVTSVQAIY
EEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEE
VPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTA
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHH
QAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQRFLSQPFFVAEAFTGLAGKY
HHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE
VKLDETIKGFKEIIAGKHDNLPESAFYLVGTIEEAVQKAKTL
EEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQEGKISQIIGPVVDVDFPEGQLPSILDALTITRPDGTKLVLETQQHLGEERVRTVAMES
CCCCCHHHHHCCHHCCCCCCCCCHHHHHHHEEECCCCCEEEEHHHHHCCHHHHHHHHHCC
TDGLIRGLSVTNTERPIQVPVGPEVLGRMLNVVGDPIDGRGSVHTSKTYSIHRSAPKFDE
CCHHHCCCEECCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHH
LSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
VGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDV
CCCCCCCCHHHHHHHHHCCCCCHHHHHEECCCCCCCCCEEEEEEHHHHHHHHCCCCCCEE
LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRIVSTKKGSVTSVQAIY
EEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEE
VPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTA
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHH
QAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQRFLSQPFFVAEAFTGLAGKY
HHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE
VKLDETIKGFKEIIAGKHDNLPESAFYLVGTIEEAVQKAKTL
EEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA