| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355893
Identifier: 119355893
GI number: 119355893
Start: 45059
End: 45778
Strand: Reverse
Name: 119355893
Synonym: Cpha266_0043
Alternate gene names: NA
Gene position: 45778-45059 (Counterclockwise)
Preceding gene: 119355894
Following gene: 119355889
Centisome position: 1.46
GC content: 49.72
Gene sequence:
>720_bases ATGACGGAGTCCCCGACATTCATCGGCAGCATCGGCCTGCTCTCGCTGCCAAACTGGATCATTCATCTCTCTTCGACTCT CGAATGGGGTATAGCGGCCCTTATGATGTTTCGCTACGGCATGATCACCGGAAGAAAAGATATCCGAATGTTTGGCATAT CAATGCTTCCTCATTGGGTCGGCAGTTTTTTTATCATCGCCTATCACCTTACCGGCGACTCCATTCCGCTGCTCCTCGAT CTATCGGAAACCGTCAATCTCTTTGGCAGCGCAGCTCTGCTCTATGCGGTTCTGACGTTACTGAAAAAAACCTCGAACCC GACACCGACAGGTTATGCGACCTGCCTTGCAACAATCATGATCGCGGGAAAACCGCAGTCTTATCTGGGAGAAGACATCT TTGACGCTATTCTTCAGGTTTCAAGTATTGTCTACATAACCTTTCTTGTCCTCCTGATCGTTGTGCGAAAACGGGATCCG GAGGTATTTTCACCCCTTACCGTGGCGGGATTCTGGTTCGTGCTGGTTTTTATTTCATTTACGGTATTCTCCATATACCT TGCAACGGAGGTACGCGGCAATCTGTCGCTTTCACATGACGACCTTCTGCACGGCCTGGCTGAAAGCCTGCTGACGCTCA GCAACCTCATGATCGTTATCGGTATTCACCGACAGACGGTATGGTACGAAAAACTGGCGAAAAAAGCGGAATCAGCGTGA
Upstream 100 bases:
>100_bases CCCGCTCCATGGAGTACGCAGATGAAAATCTTTTCAAAAAACATCTACCATCTCGTCAAGGGAAGCTGAACAAGTTTCTT TTTTCGAACAACAACCTGAC
Downstream 100 bases:
>100_bases GAGAATACCGGAATACCTCTTTTTATCGGAGAGCAGTTCCAACGCAGTCCGCACAACGGGATCGTCATGAAGACCGGCAC GTTTAGCGCCGGTTTCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTESPTFIGSIGLLSLPNWIIHLSSTLEWGIAALMMFRYGMITGRKDIRMFGISMLPHWVGSFFIIAYHLTGDSIPLLLD LSETVNLFGSAALLYAVLTLLKKTSNPTPTGYATCLATIMIAGKPQSYLGEDIFDAILQVSSIVYITFLVLLIVVRKRDP EVFSPLTVAGFWFVLVFISFTVFSIYLATEVRGNLSLSHDDLLHGLAESLLTLSNLMIVIGIHRQTVWYEKLAKKAESA
Sequences:
>Translated_239_residues MTESPTFIGSIGLLSLPNWIIHLSSTLEWGIAALMMFRYGMITGRKDIRMFGISMLPHWVGSFFIIAYHLTGDSIPLLLD LSETVNLFGSAALLYAVLTLLKKTSNPTPTGYATCLATIMIAGKPQSYLGEDIFDAILQVSSIVYITFLVLLIVVRKRDP EVFSPLTVAGFWFVLVFISFTVFSIYLATEVRGNLSLSHDDLLHGLAESLLTLSNLMIVIGIHRQTVWYEKLAKKAESA >Mature_238_residues TESPTFIGSIGLLSLPNWIIHLSSTLEWGIAALMMFRYGMITGRKDIRMFGISMLPHWVGSFFIIAYHLTGDSIPLLLDL SETVNLFGSAALLYAVLTLLKKTSNPTPTGYATCLATIMIAGKPQSYLGEDIFDAILQVSSIVYITFLVLLIVVRKRDPE VFSPLTVAGFWFVLVFISFTVFSIYLATEVRGNLSLSHDDLLHGLAESLLTLSNLMIVIGIHRQTVWYEKLAKKAESA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26483; Mature: 26351
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESPTFIGSIGLLSLPNWIIHLSSTLEWGIAALMMFRYGMITGRKDIRMFGISMLPHWV CCCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GSFFIIAYHLTGDSIPLLLDLSETVNLFGSAALLYAVLTLLKKTSNPTPTGYATCLATIM HHHHHEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IAGKPQSYLGEDIFDAILQVSSIVYITFLVLLIVVRKRDPEVFSPLTVAGFWFVLVFISF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHH TVFSIYLATEVRGNLSLSHDDLLHGLAESLLTLSNLMIVIGIHRQTVWYEKLAKKAESA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure TESPTFIGSIGLLSLPNWIIHLSSTLEWGIAALMMFRYGMITGRKDIRMFGISMLPHWV CCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GSFFIIAYHLTGDSIPLLLDLSETVNLFGSAALLYAVLTLLKKTSNPTPTGYATCLATIM HHHHHEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IAGKPQSYLGEDIFDAILQVSSIVYITFLVLLIVVRKRDPEVFSPLTVAGFWFVLVFISF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHH TVFSIYLATEVRGNLSLSHDDLLHGLAESLLTLSNLMIVIGIHRQTVWYEKLAKKAESA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA