Click here to switch to the map view.

The map label for this gene is fccA [H]

Identifier: 119355881

GI number: 119355881

Start: 30479

End: 30859

Strand: Direct

Name: fccA [H]

Synonym: Cpha266_0031

Alternate gene names: 119355881

Gene position: 30479-30859 (Clockwise)

Preceding gene: 119355880

Following gene: 119355882

Centisome position: 0.97

GC content: 48.03

Gene sequence:

>381_bases
ATGCAGGCAAAACTCAGATTGTGGTTGACTTTCTGTGTCGTCACCCCTGTCTTGCTTTTATTCGGCAACGCAGGACTGGC
TGAACAGACACCCGCTCCCAAGGTTCTGAAACCGGTTACATCAAAGGCTGTCGGGGTAACGCCGCGTGGCCAGGTTCTTT
CGCTCTCCTGTTCTTCATGTCATGGTACAGATGGCAAGAGCGTCGGTATTATGCCCTCTTTTTATGGCAAGACGCCACAG
TATATCGAAACGGCCCTTCTGGAATTTAAATCGGGGAAGCGTTATTCCACGGTTATGGGCAGGCATGCCAAAGGGTACAG
CGATGATGAAATTCATTTGATTGCACAGTATTGTGGAATAAAAGGGCAAAAAACCAAATAA

Upstream 100 bases:

>100_bases
TTCAGCCGACTGTGTTGTAACCTGATTTTCCGCTTTTGTTTTGCGTATCGGCAGCTATGAAACGAGGTTTATCATAACAT
TTAACAAGGAGGATAACATT

Downstream 100 bases:

>100_bases
GGAGGATGAAAAACATGAGCAATAAACTTTCACGCAGGGATTTCAATAAACTCCTTGTATCTGGTGTTGCCGGTTCAGCA
TTTGGTGTTTTTGGCGGCGC

Product: sulfide dehydrogenase (flavocytochrome), cytochrome c subunit

Products: NA

Alternate protein names: FCSD; FC; Flavocytochrome c cytochrome subunit [H]

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQAKLRLWLTFCVVTPVLLLFGNAGLAEQTPAPKVLKPVTSKAVGVTPRGQVLSLSCSSCHGTDGKSVGIMPSFYGKTPQ
YIETALLEFKSGKRYSTVMGRHAKGYSDDEIHLIAQYCGIKGQKTK

Sequences:

>Translated_126_residues
MQAKLRLWLTFCVVTPVLLLFGNAGLAEQTPAPKVLKPVTSKAVGVTPRGQVLSLSCSSCHGTDGKSVGIMPSFYGKTPQ
YIETALLEFKSGKRYSTVMGRHAKGYSDDEIHLIAQYCGIKGQKTK
>Mature_126_residues
MQAKLRLWLTFCVVTPVLLLFGNAGLAEQTPAPKVLKPVTSKAVGVTPRGQVLSLSCSSCHGTDGKSVGIMPSFYGKTPQ
YIETALLEFKSGKRYSTVMGRHAKGYSDDEIHLIAQYCGIKGQKTK

Specific function: Monoheme cytochrome that function as the electron transport subunit of sulfide dehydrogenase [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13634; Mature: 13634

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKLRLWLTFCVVTPVLLLFGNAGLAEQTPAPKVLKPVTSKAVGVTPRGQVLSLSCSSC
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
HGTDGKSVGIMPSFYGKTPQYIETALLEFKSGKRYSTVMGRHAKGYSDDEIHLIAQYCGI
CCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCC
KGQKTK
CCCCCC
>Mature Secondary Structure
MQAKLRLWLTFCVVTPVLLLFGNAGLAEQTPAPKVLKPVTSKAVGVTPRGQVLSLSCSSC
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
HGTDGKSVGIMPSFYGKTPQYIETALLEFKSGKRYSTVMGRHAKGYSDDEIHLIAQYCGI
CCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCC
KGQKTK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]