| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is mnmG
Identifier: 119355878
GI number: 119355878
Start: 27338
End: 29203
Strand: Reverse
Name: mnmG
Synonym: Cpha266_0028
Alternate gene names: 119355878
Gene position: 29203-27338 (Counterclockwise)
Preceding gene: 119355886
Following gene: 119355877
Centisome position: 0.93
GC content: 47.8
Gene sequence:
>1866_bases ATGTACGATATTATTGTTGCTGGTGCGGGCCATGCGGGATGTGAAGCCGTTCTTGCCGCCGCAAGAACAGGAATGTCCTG TCTCCTGATCACATCGGATCTTTCGGCAATTGCAAGAATGTCCTGCAATCCCGCTATCGGAGGCGTAGCGAAAGGGCAGA TAACGAGAGAAATCGACGCCCTCGGAGGAGAGATGGCAAAAGCAATCGATGAGACCGGCATACAGTTCAGAATGCTGAAT AAAAGTAAAGGTGCGGCAATGCACTCACCGAGAGCTCAGGCAGACCGCGCGCTCTACTCTGTTTACATGCGCAAAATCAT AGAAGAACAGGATAATATCGATCTTGTTCAGGATACGGTAACAGGCCTGGACGTAGAGAGCGGAGCGGTTCGAGGGGCGA TTCTTCCCTCAGGGCGGATAATCAAGGGTAAATCGGTCATTCTCTGCTGCGGAACCTTCCTTAACGGACTCATCCATATC GGCATGAACCACTTTCCCGGCGGAAGAACCATTGCCGAACCGCCGGTTTCGGGGCTTACCGAAAACCTTCAATCGCTGGG ATTTCGCGCAGGAAGACTTAAAACAGGTACGCCGCCTCGAATTGATTCGCGCAGCGTAAATTACTCACTTGTTGAAGAAC AGTCGGGCGATCCTGATCCGAGACCATTCTCCTTTCATACCGATTCGCTCGGTCATCGAGCCCAGGTCAGTTGTTTCGTC ACAAAAACAAAAGAAACAACGCACGAACTTCTCAGAACGGGGTTCAGTCGATCCCCGTTATTTTCAGGCAAAGTACAGGG CGTAGGGCCACGATACTGTCCGTCAGTCGAGGATAAAATATTTCGTTTCCCCGACAAAAACAGCCATCATATCTTCCTCG AACCGGAAGGTGCCGAAACAAACGAAATGTATGTGAACGGTTTTTCGACATCGCTGCCTGAAGATATACAACTGCTTGCC TTGCGATCGATCCCTGGTCTCGAGCATGTTAAAATGATCAGACCCGGATATGCCATTGAGTACGACTTCTTTTTTCCATA CCAGATAAAAAATACTCTTGAAACGAAAATCATTGAAAACCTCTATTTTGCCGGACAGATTAACGGTACGTCAGGCTATG AAGAGGCGGCTGCACAGGGGCTTATGGCAGGAATAAACGCATCGCTCAAAATACAAAACAGGAAACCCTTCGTACTCGAT CGATCGCAGGCCTATATAGGCGTCCTTATTGATGATCTTGTAACAAAAGATATTATCGAACCCTACAGAATGTTCACCTC TTCGGCAGAACATCGAATCAGCCTCCGTCATGATAACGCCGATATCCGTTTATGTCGGATGGGTCATGAGGCAGGAACGG TCGATTTCTCTTCGTTTACGAAAACCGAGTATAAAATCAGCGCCATCAGGCAACTCCGGCAACTGTGTGATACCATGAAA CTGCATCCTGATCAAATAATCAGCGCAATGGCCGGCGCAGCACAACAACCGCCATTGCAACCAATAGCGATATCGAACCT TCTTAAAAGACCTGAAATCGATTTCGAAAATCTCCTTGTGCTGTCGGAAGATTTTCGAGCCGGTGTTAATGAGATAACAA CAGATCCCGATGTATTTGAACAGGTTGTCATCGATCTGAAATATGAAGGGTACCTTAAACGGGATCTGTTAATGACTGAA AAGATAGCCCGTCTTGAATCCCATAGTATTCCAGGCTCCTTTTCCTATGCAACAGTGTCGGGACTTTCAAATGAAGGACG CGAAAAACTGACGCTCCACAAACCGGAAACTATCGGACAGGCATCCAGAATTCCCGGCGTCTCTCCATCTGATATATCGG TACTCCTGATAAAAATCGGGCGATGA
Upstream 100 bases:
>100_bases TAGAACCACAGACCGTATTAACAGGCATTATTTGTATCTTCCGGTTAGCGCTACTGGCGATTTCTCAACAAAACGTTTCA CGTGAAACAACCCCATTTTC
Downstream 100 bases:
>100_bases TCAGTCAGAATGTTTCACGTGAAACGCAAAAAAAAGATGCGCCGAACATGATGCATCGTCATAAGATCGATTATCGACTA TATTTCCTAAAGAGGATGGT
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 621; Mature: 621
Protein sequence:
>621_residues MYDIIVAGAGHAGCEAVLAAARTGMSCLLITSDLSAIARMSCNPAIGGVAKGQITREIDALGGEMAKAIDETGIQFRMLN KSKGAAMHSPRAQADRALYSVYMRKIIEEQDNIDLVQDTVTGLDVESGAVRGAILPSGRIIKGKSVILCCGTFLNGLIHI GMNHFPGGRTIAEPPVSGLTENLQSLGFRAGRLKTGTPPRIDSRSVNYSLVEEQSGDPDPRPFSFHTDSLGHRAQVSCFV TKTKETTHELLRTGFSRSPLFSGKVQGVGPRYCPSVEDKIFRFPDKNSHHIFLEPEGAETNEMYVNGFSTSLPEDIQLLA LRSIPGLEHVKMIRPGYAIEYDFFFPYQIKNTLETKIIENLYFAGQINGTSGYEEAAAQGLMAGINASLKIQNRKPFVLD RSQAYIGVLIDDLVTKDIIEPYRMFTSSAEHRISLRHDNADIRLCRMGHEAGTVDFSSFTKTEYKISAIRQLRQLCDTMK LHPDQIISAMAGAAQQPPLQPIAISNLLKRPEIDFENLLVLSEDFRAGVNEITTDPDVFEQVVIDLKYEGYLKRDLLMTE KIARLESHSIPGSFSYATVSGLSNEGREKLTLHKPETIGQASRIPGVSPSDISVLLIKIGR
Sequences:
>Translated_621_residues MYDIIVAGAGHAGCEAVLAAARTGMSCLLITSDLSAIARMSCNPAIGGVAKGQITREIDALGGEMAKAIDETGIQFRMLN KSKGAAMHSPRAQADRALYSVYMRKIIEEQDNIDLVQDTVTGLDVESGAVRGAILPSGRIIKGKSVILCCGTFLNGLIHI GMNHFPGGRTIAEPPVSGLTENLQSLGFRAGRLKTGTPPRIDSRSVNYSLVEEQSGDPDPRPFSFHTDSLGHRAQVSCFV TKTKETTHELLRTGFSRSPLFSGKVQGVGPRYCPSVEDKIFRFPDKNSHHIFLEPEGAETNEMYVNGFSTSLPEDIQLLA LRSIPGLEHVKMIRPGYAIEYDFFFPYQIKNTLETKIIENLYFAGQINGTSGYEEAAAQGLMAGINASLKIQNRKPFVLD RSQAYIGVLIDDLVTKDIIEPYRMFTSSAEHRISLRHDNADIRLCRMGHEAGTVDFSSFTKTEYKISAIRQLRQLCDTMK LHPDQIISAMAGAAQQPPLQPIAISNLLKRPEIDFENLLVLSEDFRAGVNEITTDPDVFEQVVIDLKYEGYLKRDLLMTE KIARLESHSIPGSFSYATVSGLSNEGREKLTLHKPETIGQASRIPGVSPSDISVLLIKIGR >Mature_621_residues MYDIIVAGAGHAGCEAVLAAARTGMSCLLITSDLSAIARMSCNPAIGGVAKGQITREIDALGGEMAKAIDETGIQFRMLN KSKGAAMHSPRAQADRALYSVYMRKIIEEQDNIDLVQDTVTGLDVESGAVRGAILPSGRIIKGKSVILCCGTFLNGLIHI GMNHFPGGRTIAEPPVSGLTENLQSLGFRAGRLKTGTPPRIDSRSVNYSLVEEQSGDPDPRPFSFHTDSLGHRAQVSCFV TKTKETTHELLRTGFSRSPLFSGKVQGVGPRYCPSVEDKIFRFPDKNSHHIFLEPEGAETNEMYVNGFSTSLPEDIQLLA LRSIPGLEHVKMIRPGYAIEYDFFFPYQIKNTLETKIIENLYFAGQINGTSGYEEAAAQGLMAGINASLKIQNRKPFVLD RSQAYIGVLIDDLVTKDIIEPYRMFTSSAEHRISLRHDNADIRLCRMGHEAGTVDFSSFTKTEYKISAIRQLRQLCDTMK LHPDQIISAMAGAAQQPPLQPIAISNLLKRPEIDFENLLVLSEDFRAGVNEITTDPDVFEQVVIDLKYEGYLKRDLLMTE KIARLESHSIPGSFSYATVSGLSNEGREKLTLHKPETIGQASRIPGVSPSDISVLLIKIGR
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=636, Percent_Identity=40.0943396226415, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI19882217, Length=661, Percent_Identity=38.5779122541604, Blast_Score=417, Evalue=1e-116, Organism=Homo sapiens, GI183227703, Length=676, Percent_Identity=37.7218934911243, Blast_Score=411, Evalue=1e-115, Organism=Escherichia coli, GI2367273, Length=622, Percent_Identity=49.8392282958199, Blast_Score=606, Evalue=1e-174, Organism=Caenorhabditis elegans, GI17534255, Length=620, Percent_Identity=37.9032258064516, Blast_Score=419, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6321202, Length=621, Percent_Identity=42.6731078904992, Blast_Score=464, Evalue=1e-131, Organism=Drosophila melanogaster, GI24658174, Length=632, Percent_Identity=40.3481012658228, Blast_Score=420, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_CHLPD (A1BCG1)
Other databases:
- EMBL: CP000492 - RefSeq: YP_910522.1 - ProteinModelPortal: A1BCG1 - SMR: A1BCG1 - STRING: A1BCG1 - GeneID: 4568916 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0028 - NMPDR: fig|290317.7.peg.23 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 68178; Mature: 68178
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDIIVAGAGHAGCEAVLAAARTGMSCLLITSDLSAIARMSCNPAIGGVAKGQITREIDA CCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHH LGGEMAKAIDETGIQFRMLNKSKGAAMHSPRAQADRALYSVYMRKIIEEQDNIDLVQDTV HHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH TGLDVESGAVRGAILPSGRIIKGKSVILCCGTFLNGLIHIGMNHFPGGRTIAEPPVSGLT HCCCCCCCCEEEEECCCCEEEECCEEEEEHHHHHHHHHHHCCCCCCCCCEECCCCHHHHH ENLQSLGFRAGRLKTGTPPRIDSRSVNYSLVEEQSGDPDPRPFSFHTDSLGHRAQVSCFV HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEE TKTKETTHELLRTGFSRSPLFSGKVQGVGPRYCPSVEDKIFRFPDKNSHHIFLEPEGAET ECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEECCCCCCC NEMYVNGFSTSLPEDIQLLALRSIPGLEHVKMIRPGYAIEYDFFFPYQIKNTLETKIIEN CEEEEECCCCCCCCHHHHHHHHCCCCHHHHHEECCCEEEEEEEECCHHHHHHHHHHHHHH LYFAGQINGTSGYEEAAAQGLMAGINASLKIQNRKPFVLDRSQAYIGVLIDDLVTKDIIE EEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEHHHHHHHHHHHHHH PYRMFTSSAEHRISLRHDNADIRLCRMGHEAGTVDFSSFTKTEYKISAIRQLRQLCDTMK HHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHC LHPDQIISAMAGAAQQPPLQPIAISNLLKRPEIDFENLLVLSEDFRAGVNEITTDPDVFE CCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHEEEEECHHHCCHHHCCCCHHHHH QVVIDLKYEGYLKRDLLMTEKIARLESHSIPGSFSYATVSGLSNEGREKLTLHKPETIGQ HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEECCHHCCH ASRIPGVSPSDISVLLIKIGR HHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MYDIIVAGAGHAGCEAVLAAARTGMSCLLITSDLSAIARMSCNPAIGGVAKGQITREIDA CCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHH LGGEMAKAIDETGIQFRMLNKSKGAAMHSPRAQADRALYSVYMRKIIEEQDNIDLVQDTV HHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH TGLDVESGAVRGAILPSGRIIKGKSVILCCGTFLNGLIHIGMNHFPGGRTIAEPPVSGLT HCCCCCCCCEEEEECCCCEEEECCEEEEEHHHHHHHHHHHCCCCCCCCCEECCCCHHHHH ENLQSLGFRAGRLKTGTPPRIDSRSVNYSLVEEQSGDPDPRPFSFHTDSLGHRAQVSCFV HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEE TKTKETTHELLRTGFSRSPLFSGKVQGVGPRYCPSVEDKIFRFPDKNSHHIFLEPEGAET ECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEECCCCCCC NEMYVNGFSTSLPEDIQLLALRSIPGLEHVKMIRPGYAIEYDFFFPYQIKNTLETKIIEN CEEEEECCCCCCCCHHHHHHHHCCCCHHHHHEECCCEEEEEEEECCHHHHHHHHHHHHHH LYFAGQINGTSGYEEAAAQGLMAGINASLKIQNRKPFVLDRSQAYIGVLIDDLVTKDIIE EEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEHHHHHHHHHHHHHH PYRMFTSSAEHRISLRHDNADIRLCRMGHEAGTVDFSSFTKTEYKISAIRQLRQLCDTMK HHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHC LHPDQIISAMAGAAQQPPLQPIAISNLLKRPEIDFENLLVLSEDFRAGVNEITTDPDVFE CCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHEEEEECHHHCCHHHCCCCHHHHH QVVIDLKYEGYLKRDLLMTEKIARLESHSIPGSFSYATVSGLSNEGREKLTLHKPETIGQ HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEECCHHCCH ASRIPGVSPSDISVLLIKIGR HHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA