Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119355874

Identifier: 119355874

GI number: 119355874

Start: 18030

End: 18560

Strand: Direct

Name: 119355874

Synonym: Cpha266_0021

Alternate gene names: NA

Gene position: 18030-18560 (Clockwise)

Preceding gene: 119355873

Following gene: 119355879

Centisome position: 0.58

GC content: 40.3

Gene sequence:

>531_bases
ATGAAAAAAATACGGACTCTTCTCGTGTTGTCAATGTTATTGGCAACTGGTTGCCAATCAACAATCCCAAAAGATGCATT
AGTATTGAATAATGAGTCACTTGCAACACGCCAACTTCAAACTCGCAAGTATCAGACAAAAGATGAAGCTAAAGTGTTAT
CATCTGTTGCAGGGGTTTTACAGGATTTAGGATTTAATCTGAATGAAAGCCATTCCGCATTGGGGGTTATTTCTGCTTCC
AAAACACGGAGTGCTGTCAATGCTGGACAGCAGATACTTGCAGTTACTTTTGCACTTCTTGGTGGGGGAGTTTCTGCTAC
CGATGATCATCAGGTCATGACAGCATCTGTAGTAACAAAACCGGTTGGGGAAAAATCAGACTATGTCGCTGTAAGAGTCA
CTTTTCAGCGGCTTGTATACAATACCAACGGACAGGTTAGTAAAGCAGAAAGTCTCCAAGACTCAGAGATATATCAGGGC
TTTTTTGAAAAACTTTCAAAATCAATTTTTCTTGAGGCACAGGAAATATGA

Upstream 100 bases:

>100_bases
CACAAGCCAGAAAACTCTAACCATAGTAATAAAATTCGACGATAACCGTAAAGTTCGCGAATTTGCTTACCACACATCAA
GATTTTAATAAAAGTATTTT

Downstream 100 bases:

>100_bases
AAAACACCTATTTAATTGGAACATTGTTATTGCTGAGTTTGACTGGATGTGCTACCACGAAGGAAAGACTTCTTGATTCC
GACGTTAGTCAGGTTCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKIRTLLVLSMLLATGCQSTIPKDALVLNNESLATRQLQTRKYQTKDEAKVLSSVAGVLQDLGFNLNESHSALGVISAS
KTRSAVNAGQQILAVTFALLGGGVSATDDHQVMTASVVTKPVGEKSDYVAVRVTFQRLVYNTNGQVSKAESLQDSEIYQG
FFEKLSKSIFLEAQEI

Sequences:

>Translated_176_residues
MKKIRTLLVLSMLLATGCQSTIPKDALVLNNESLATRQLQTRKYQTKDEAKVLSSVAGVLQDLGFNLNESHSALGVISAS
KTRSAVNAGQQILAVTFALLGGGVSATDDHQVMTASVVTKPVGEKSDYVAVRVTFQRLVYNTNGQVSKAESLQDSEIYQG
FFEKLSKSIFLEAQEI
>Mature_176_residues
MKKIRTLLVLSMLLATGCQSTIPKDALVLNNESLATRQLQTRKYQTKDEAKVLSSVAGVLQDLGFNLNESHSALGVISAS
KTRSAVNAGQQILAVTFALLGGGVSATDDHQVMTASVVTKPVGEKSDYVAVRVTFQRLVYNTNGQVSKAESLQDSEIYQG
FFEKLSKSIFLEAQEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19026; Mature: 19026

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIRTLLVLSMLLATGCQSTIPKDALVLNNESLATRQLQTRKYQTKDEAKVLSSVAGVL
CHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QDLGFNLNESHSALGVISASKTRSAVNAGQQILAVTFALLGGGVSATDDHQVMTASVVTK
HHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
PVGEKSDYVAVRVTFQRLVYNTNGQVSKAESLQDSEIYQGFFEKLSKSIFLEAQEI
CCCCCCCEEEEEEEHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIRTLLVLSMLLATGCQSTIPKDALVLNNESLATRQLQTRKYQTKDEAKVLSSVAGVL
CHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QDLGFNLNESHSALGVISASKTRSAVNAGQQILAVTFALLGGGVSATDDHQVMTASVVTK
HHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
PVGEKSDYVAVRVTFQRLVYNTNGQVSKAESLQDSEIYQGFFEKLSKSIFLEAQEI
CCCCCCCEEEEEEEHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA